RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 ZNF594Q96JF6 807 aaPredicted RBP24.55■■□□□ 1.52
TRIO-223ENST00000515710 NARFQ9UHQ1 456 aa24.55■■□□□ 1.52
TRIO-223ENST00000515710 BRWD3Q6RI45 1802 aa24.54■■□□□ 1.52
TRIO-223ENST00000515710 GNPATO15228 680 aa24.54■■□□□ 1.52
TRIO-223ENST00000515710 REC8O95072 547 aa24.54■■□□□ 1.52
TRIO-223ENST00000515710 CHMLP26374 656 aa24.54■■□□□ 1.52
TRIO-223ENST00000515710 ANKRD18BA2A2Z9 1011 aa24.53■■□□□ 1.52
TRIO-223ENST00000515710 HMGB2P26583 209 aaKnown RBP24.53■■□□□ 1.52
TRIO-223ENST00000515710 NTSR2O95665 410 aa24.53■■□□□ 1.52
TRIO-223ENST00000515710 LRRC24Q50LG9 513 aa24.53■■□□□ 1.52
TRIO-223ENST00000515710 TLR7Q9NYK1 1049 aaKnown RBP24.53■■□□□ 1.52
TRIO-223ENST00000515710 ITGA6P23229 1130 aa24.52■■□□□ 1.52
TRIO-223ENST00000515710 SLC27A3Q5K4L6 730 aa24.52■■□□□ 1.52
TRIO-223ENST00000515710 DAXXQ9UER7 740 aaPredicted RBP24.52■■□□□ 1.52
TRIO-223ENST00000515710 ESYT1Q9BSJ8 1104 aa24.51■■□□□ 1.51
TRIO-223ENST00000515710 GREM2Q9H772 168 aa24.51■■□□□ 1.51
TRIO-223ENST00000515710 CEP126Q9P2H0 1117 aa24.51■■□□□ 1.51
TRIO-223ENST00000515710 TAF1LQ8IZX4 1826 aa24.51■■□□□ 1.51
TRIO-223ENST00000515710 ZPR1O75312 459 aa24.51■■□□□ 1.51
TRIO-223ENST00000515710 MAP4K4O95819 1239 aaPredicted RBP24.51■■□□□ 1.51
TRIO-223ENST00000515710 EVI5LQ96CN4 794 aa24.51■■□□□ 1.51
TRIO-223ENST00000515710 USP26Q9BXU7 913 aa24.51■■□□□ 1.51
TRIO-223ENST00000515710 PUS3Q9BZE2 481 aaKnown RBP24.51■■□□□ 1.51
TRIO-223ENST00000515710 DBNLQ9UJU6 430 aaKnown RBP24.51■■□□□ 1.51
TRIO-223ENST00000515710 ATP5JP18859 108 aa24.5■■□□□ 1.51
TRIO-223ENST00000515710 BECN1Q14457 450 aa24.5■■□□□ 1.51
TRIO-223ENST00000515710 CCDC85AQ96PX6 553 aaPredicted RBP24.5■■□□□ 1.51
TRIO-223ENST00000515710 FAM177BA6PVY3 158 aa24.49■■□□□ 1.51
TRIO-223ENST00000515710 TRIM37O94972 964 aa24.49■■□□□ 1.51
TRIO-223ENST00000515710 BCL2L12Q9HB09 334 aa24.49■■□□□ 1.51
TRIO-223ENST00000515710 C4BP0C0L5 1744 aa24.49■■□□□ 1.51
TRIO-223ENST00000515710 SCN7AQ01118 1682 aa24.49■■□□□ 1.51
TRIO-223ENST00000515710 RXRBP28702 533 aa24.49■■□□□ 1.51
TRIO-223ENST00000515710 USPL1Q5W0Q7 1092 aa24.49■■□□□ 1.51
TRIO-223ENST00000515710 AKAP2Q9Y2D5 859 aa24.49■■□□□ 1.51
TRIO-223ENST00000515710 MYH3P11055 1940 aa24.48■■□□□ 1.51
TRIO-223ENST00000515710 ARHGEF1Q92888 912 aaKnown RBP24.48■■□□□ 1.51
TRIO-223ENST00000515710 LRRC4BQ9NT99 713 aa24.48■■□□□ 1.51
TRIO-223ENST00000515710 HCLS1P14317 486 aaPredicted RBP24.47■■□□□ 1.51
TRIO-223ENST00000515710 TRAPPC3LQ5T215 181 aa24.47■■□□□ 1.51
TRIO-223ENST00000515710 DBNDD2Q9BQY9 259 aa24.47■■□□□ 1.51
TRIO-223ENST00000515710 ADRA2BP18089 450 aa24.47■■□□□ 1.51
TRIO-223ENST00000515710 LDHAL6AQ6ZMR3 332 aa24.47■■□□□ 1.51
TRIO-223ENST00000515710 ERICH6Q7L0X2 663 aa24.47■■□□□ 1.51
TRIO-223ENST00000515710 RIPOR2Q9Y4F9 1068 aa24.47■■□□□ 1.51
TRIO-223ENST00000515710 EPB41L2O43491 1005 aaKnown RBP24.46■■□□□ 1.51
TRIO-223ENST00000515710 BOLA2Q9H3K6 86 aa24.46■■□□□ 1.51
TRIO-223ENST00000515710 CCDC152Q4G0S7 254 aa24.45■■□□□ 1.51
TRIO-223ENST00000515710 TBC1D9BQ66K14 1250 aa24.45■■□□□ 1.51
TRIO-223ENST00000515710 NEUROD6Q96NK8 337 aa24.45■■□□□ 1.51
TRIO-223ENST00000515710 NYXQ9GZU5 481 aa24.45■■□□□ 1.51
TRIO-223ENST00000515710 ZNF609O15014 1411 aa24.45■■□□□ 1.5
TRIO-223ENST00000515710 RTL9Q8NET4 1388 aa24.45■■□□□ 1.5
TRIO-223ENST00000515710 RFC4P35249 363 aa24.45■■□□□ 1.5
TRIO-223ENST00000515710 SMIM5Q71RC9 77 aa24.45■■□□□ 1.5
TRIO-223ENST00000515710 SETDB2Q96T68 719 aa24.45■■□□□ 1.5
TRIO-223ENST00000515710 SRP68Q9UHB9 627 aaKnown RBP24.45■■□□□ 1.5
TRIO-223ENST00000515710 A0A1B0GUL7 405 aa24.44■■□□□ 1.5
TRIO-223ENST00000515710 HIP1O00291 1037 aa24.44■■□□□ 1.5
TRIO-223ENST00000515710 TIMM10P62072 90 aa24.44■■□□□ 1.5
TRIO-223ENST00000515710 CNNM1Q9NRU3 951 aa24.44■■□□□ 1.5
TRIO-223ENST00000515710 AK9Q5TCS8 1911 aa24.44■■□□□ 1.5
TRIO-223ENST00000515710 RUFY2Q8WXA3 655 aa24.43■■□□□ 1.5
TRIO-223ENST00000515710 SLC10A5Q5PT55 438 aa24.43■■□□□ 1.5
TRIO-223ENST00000515710 LAMB2P55268 1798 aa24.43■■□□□ 1.5
TRIO-223ENST00000515710 METTL24Q5JXM2 366 aa24.42■■□□□ 1.5
TRIO-223ENST00000515710 KIF2CQ99661 725 aa24.42■■□□□ 1.5
TRIO-223ENST00000515710 DDX60Q8IY21 1712 aaKnown RBP24.42■■□□□ 1.5
TRIO-223ENST00000515710 BICDL1Q6ZP65 573 aa24.41■■□□□ 1.5
TRIO-223ENST00000515710 AMIGO3Q86WK7 504 aa24.41■■□□□ 1.5
TRIO-223ENST00000515710 HAUS7Q99871 368 aa24.41■■□□□ 1.5
TRIO-223ENST00000515710 DIAPH3Q9NSV4 1193 aa24.41■■□□□ 1.5
TRIO-223ENST00000515710 ERFEQ4G0M1 354 aa24.41■■□□□ 1.5
TRIO-223ENST00000515710 PLSCR1O15162 318 aa24.4■■□□□ 1.5
TRIO-223ENST00000515710 SGSM2O43147 1006 aa24.4■■□□□ 1.5
TRIO-223ENST00000515710 GTF2E1P29083 439 aaPredicted RBP24.4■■□□□ 1.5
TRIO-223ENST00000515710 FBXO41Q8TF61 875 aa24.4■■□□□ 1.5
TRIO-223ENST00000515710 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.4■■□□□ 1.5
TRIO-223ENST00000515710 PHF14O94880 888 aa24.39■■□□□ 1.5
TRIO-223ENST00000515710 SF3B3Q15393 1217 aaKnown RBP24.39■■□□□ 1.5
TRIO-223ENST00000515710 TXNRD1Q16881 649 aa24.39■■□□□ 1.5
TRIO-223ENST00000515710 MROH5Q6ZUA9 1318 aa24.39■■□□□ 1.5
TRIO-223ENST00000515710 SSFA2P28290 1259 aa24.39■■□□□ 1.49
TRIO-223ENST00000515710 SLC4A3P48751 1232 aa24.39■■□□□ 1.49
TRIO-223ENST00000515710 ANO2Q9NQ90 1003 aa24.39■■□□□ 1.49
TRIO-223ENST00000515710 RIC1Q4ADV7 1423 aa24.39■■□□□ 1.49
TRIO-223ENST00000515710 LRP5O75197 1615 aa24.38■■□□□ 1.49
TRIO-223ENST00000515710 MCCP23508 829 aa24.38■■□□□ 1.49
TRIO-223ENST00000515710 CCDC158Q5M9N0 1113 aa24.38■■□□□ 1.49
TRIO-223ENST00000515710 TPTE2Q6XPS3 522 aa24.38■■□□□ 1.49
TRIO-223ENST00000515710 TICAM2Q86XR7 235 aa24.38■■□□□ 1.49
TRIO-223ENST00000515710 SNX21Q969T3 373 aa24.38■■□□□ 1.49
TRIO-223ENST00000515710 TBC1D2Q9BYX2 928 aa24.38■■□□□ 1.49
TRIO-223ENST00000515710 VGLL2Q8N8G2 317 aa24.37■■□□□ 1.49
TRIO-223ENST00000515710 MPHOSPH8Q99549 860 aa24.37■■□□□ 1.49
TRIO-223ENST00000515710 FSD1Q9BTV5 496 aa24.37■■□□□ 1.49
TRIO-223ENST00000515710 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.37■■□□□ 1.49
TRIO-223ENST00000515710 PDE8BO95263 885 aa24.37■■□□□ 1.49
TRIO-223ENST00000515710 IGHMBP2P38935 993 aaKnown RBP24.37■■□□□ 1.49
TRIO-223ENST00000515710 ATP2B3Q16720 1220 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms