RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 COL5A3P25940 1745 aaPredicted RBP18.72■□□□□ 0.59
THUMPD3-210ENST00000515662 MYH14Q7Z406 1995 aaKnown RBP18.71■□□□□ 0.59
THUMPD3-210ENST00000515662 HIP1O00291 1037 aa18.71■□□□□ 0.59
THUMPD3-210ENST00000515662 ST18O60284 1047 aa18.71■□□□□ 0.59
THUMPD3-210ENST00000515662 HSPA4P34932 840 aa18.71■□□□□ 0.59
THUMPD3-210ENST00000515662 MEX3CQ5U5Q3 659 aaKnown RBP18.71■□□□□ 0.59
THUMPD3-210ENST00000515662 IL27Q8NEV9 243 aa18.71■□□□□ 0.59
THUMPD3-210ENST00000515662 IRS4O14654 1257 aaPredicted RBP18.71■□□□□ 0.59
THUMPD3-210ENST00000515662 CAMTA2O94983 1202 aa18.71■□□□□ 0.59
THUMPD3-210ENST00000515662 IFIT5Q13325 482 aaKnown RBP18.71■□□□□ 0.59
THUMPD3-210ENST00000515662 AEBP2Q6ZN18 517 aaPredicted RBP18.71■□□□□ 0.59
THUMPD3-210ENST00000515662 TTLL11Q8NHH1 800 aa18.71■□□□□ 0.59
THUMPD3-210ENST00000515662 CCDC85AQ96PX6 553 aaPredicted RBP18.71■□□□□ 0.59
THUMPD3-210ENST00000515662 ZNF609O15014 1411 aa18.7■□□□□ 0.58
THUMPD3-210ENST00000515662 CTSWP56202 376 aa18.7■□□□□ 0.58
THUMPD3-210ENST00000515662 KIAA1211Q6ZU35 1233 aa18.7■□□□□ 0.58
THUMPD3-210ENST00000515662 FRAT2O75474 233 aaPredicted RBP18.7■□□□□ 0.58
THUMPD3-210ENST00000515662 PTF1AQ7RTS3 328 aa18.7■□□□□ 0.58
THUMPD3-210ENST00000515662 FSD1Q9BTV5 496 aa18.7■□□□□ 0.58
THUMPD3-210ENST00000515662 TIMM10P62072 90 aa18.69■□□□□ 0.58
THUMPD3-210ENST00000515662 NEUROD6Q96NK8 337 aa18.69■□□□□ 0.58
THUMPD3-210ENST00000515662 HAUS7Q99871 368 aa18.69■□□□□ 0.58
THUMPD3-210ENST00000515662 LINC00116Q8NCU8 138 aa18.69■□□□□ 0.58
THUMPD3-210ENST00000515662 GJD4Q96KN9 370 aaPredicted RBP18.69■□□□□ 0.58
THUMPD3-210ENST00000515662 CEP126Q9P2H0 1117 aa18.69■□□□□ 0.58
THUMPD3-210ENST00000515662 PDE8AO60658 829 aa18.68■□□□□ 0.58
THUMPD3-210ENST00000515662 HSP90AA1P07900 732 aaKnown RBP18.68■□□□□ 0.58
THUMPD3-210ENST00000515662 NMIQ13287 307 aaPredicted RBP18.68■□□□□ 0.58
THUMPD3-210ENST00000515662 TAF7LQ5H9L4 462 aa18.68■□□□□ 0.58
THUMPD3-210ENST00000515662 EDC3Q96F86 508 aaKnown RBP18.68■□□□□ 0.58
THUMPD3-210ENST00000515662 FAM227BQ96M60 508 aa18.68■□□□□ 0.58
THUMPD3-210ENST00000515662 GREM2Q9H772 168 aa18.68■□□□□ 0.58
THUMPD3-210ENST00000515662 AFF2P51816 1311 aa18.68■□□□□ 0.58
THUMPD3-210ENST00000515662 NEK4P51957 841 aa18.68■□□□□ 0.58
THUMPD3-210ENST00000515662 SUSD4Q5VX71 490 aa18.68■□□□□ 0.58
THUMPD3-210ENST00000515662 SNRKQ9NRH2 765 aa18.68■□□□□ 0.58
THUMPD3-210ENST00000515662 ITGA6P23229 1130 aa18.67■□□□□ 0.58
THUMPD3-210ENST00000515662 MYH3P11055 1940 aa18.67■□□□□ 0.58
THUMPD3-210ENST00000515662 NHSQ6T4R5 1651 aa18.67■□□□□ 0.58
THUMPD3-210ENST00000515662 A0A1B0GUL7 405 aa18.67■□□□□ 0.58
THUMPD3-210ENST00000515662 AK7Q96M32 723 aa18.67■□□□□ 0.58
THUMPD3-210ENST00000515662 PTH1RQ03431 593 aa18.66■□□□□ 0.58
THUMPD3-210ENST00000515662 PARP10Q53GL7 1025 aa18.66■□□□□ 0.58
THUMPD3-210ENST00000515662 FOXD4L1Q9NU39 408 aa18.66■□□□□ 0.58
THUMPD3-210ENST00000515662 CIZ1Q9ULV3 898 aaPredicted RBP18.66■□□□□ 0.58
THUMPD3-210ENST00000515662 A0A0D9SFI3 127 aa18.66■□□□□ 0.58
THUMPD3-210ENST00000515662 ANKRD18BA2A2Z9 1011 aa18.66■□□□□ 0.58
THUMPD3-210ENST00000515662 DNAJC2Q99543 621 aaKnown RBP18.66■□□□□ 0.58
THUMPD3-210ENST00000515662 RTN4Q9NQC3 1192 aaKnown RBP18.66■□□□□ 0.58
THUMPD3-210ENST00000515662 NDUFB9Q9Y6M9 179 aa18.66■□□□□ 0.58
THUMPD3-210ENST00000515662 BTAF1O14981 1849 aa18.66■□□□□ 0.58
THUMPD3-210ENST00000515662 SH3TC1Q8TE82 1336 aa18.65■□□□□ 0.58
THUMPD3-210ENST00000515662 RFX7Q2KHR2 1363 aa18.65■□□□□ 0.58
THUMPD3-210ENST00000515662 ATRNO75882 1429 aa18.65■□□□□ 0.58
THUMPD3-210ENST00000515662 KCNQ4P56696 695 aa18.65■□□□□ 0.58
THUMPD3-210ENST00000515662 UTP14AQ9BVJ6 771 aaKnown RBP18.65■□□□□ 0.58
THUMPD3-210ENST00000515662 AKAP2Q9Y2D5 859 aa18.65■□□□□ 0.58
THUMPD3-210ENST00000515662 RIPOR2Q9Y4F9 1068 aa18.65■□□□□ 0.58
THUMPD3-210ENST00000515662 SNX14Q9Y5W7 946 aa18.65■□□□□ 0.58
THUMPD3-210ENST00000515662 CNTNAP4Q9C0A0 1308 aa18.65■□□□□ 0.58
THUMPD3-210ENST00000515662 RIC1Q4ADV7 1423 aa18.65■□□□□ 0.58
THUMPD3-210ENST00000515662 FAM182BQ5T319 152 aa18.64■□□□□ 0.58
THUMPD3-210ENST00000515662 ONECUT3O60422 494 aaPredicted RBP18.64■□□□□ 0.57
THUMPD3-210ENST00000515662 CCDC171Q6TFL3 1326 aa18.64■□□□□ 0.57
THUMPD3-210ENST00000515662 MED23Q9ULK4 1368 aa18.64■□□□□ 0.57
THUMPD3-210ENST00000515662 BCORQ6W2J9 1755 aa18.64■□□□□ 0.57
THUMPD3-210ENST00000515662 MCM2P49736 904 aa18.63■□□□□ 0.57
THUMPD3-210ENST00000515662 LDHAL6AQ6ZMR3 332 aa18.63■□□□□ 0.57
THUMPD3-210ENST00000515662 RASEFQ8IZ41 740 aa18.63■□□□□ 0.57
THUMPD3-210ENST00000515662 NIP7Q9Y221 180 aaKnown RBP eCLIP18.63■□□□□ 0.57
THUMPD3-210ENST00000515662 TRPC5Q9UL62 973 aaPredicted RBP18.63■□□□□ 0.57
THUMPD3-210ENST00000515662 ZNF652Q9Y2D9 606 aa18.63■□□□□ 0.57
THUMPD3-210ENST00000515662 FAM177BA6PVY3 158 aa18.62■□□□□ 0.57
THUMPD3-210ENST00000515662 HCLS1P14317 486 aaPredicted RBP18.62■□□□□ 0.57
THUMPD3-210ENST00000515662 DDX46Q7L014 1031 aaKnown RBP18.62■□□□□ 0.57
THUMPD3-210ENST00000515662 NTSR2O95665 410 aa18.62■□□□□ 0.57
THUMPD3-210ENST00000515662 CLEC4GQ6UXB4 293 aa18.62■□□□□ 0.57
THUMPD3-210ENST00000515662 KBTBD3Q8NAB2 608 aa18.62■□□□□ 0.57
THUMPD3-210ENST00000515662 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.62■□□□□ 0.57
THUMPD3-210ENST00000515662 KCNB2Q92953 911 aa18.62■□□□□ 0.57
THUMPD3-210ENST00000515662 UPF3BQ9BZI7 483 aaKnown RBP18.62■□□□□ 0.57
THUMPD3-210ENST00000515662 PAG1Q9NWQ8 432 aa18.62■□□□□ 0.57
THUMPD3-210ENST00000515662 METTL24Q5JXM2 366 aa18.61■□□□□ 0.57
THUMPD3-210ENST00000515662 MAP4K1Q92918 833 aa18.61■□□□□ 0.57
THUMPD3-210ENST00000515662 XAGE2Q96GT9 111 aa18.61■□□□□ 0.57
THUMPD3-210ENST00000515662 CNNM1Q9NRU3 951 aa18.61■□□□□ 0.57
THUMPD3-210ENST00000515662 ADORA1P30542 326 aa18.61■□□□□ 0.57
THUMPD3-210ENST00000515662 NECTIN1Q15223 517 aa18.61■□□□□ 0.57
THUMPD3-210ENST00000515662 RC3H1Q5TC82 1133 aaKnown RBP18.61■□□□□ 0.57
THUMPD3-210ENST00000515662 LRP5O75197 1615 aa18.61■□□□□ 0.57
THUMPD3-210ENST00000515662 GOLIM4O00461 696 aa18.6■□□□□ 0.57
THUMPD3-210ENST00000515662 IFIT1P09914 478 aaKnown RBP18.6■□□□□ 0.57
THUMPD3-210ENST00000515662 GSE1Q14687 1217 aa18.6■□□□□ 0.57
THUMPD3-210ENST00000515662 DDX60Q8IY21 1712 aaKnown RBP18.6■□□□□ 0.57
THUMPD3-210ENST00000515662 PRPF40BQ6NWY9 871 aaKnown RBP18.6■□□□□ 0.57
THUMPD3-210ENST00000515662 ZNF589Q86UQ0 364 aaPredicted RBP18.6■□□□□ 0.57
THUMPD3-210ENST00000515662 TICAM2Q86XR7 235 aa18.6■□□□□ 0.57
THUMPD3-210ENST00000515662 SEPT12Q8IYM1 358 aa18.6■□□□□ 0.57
THUMPD3-210ENST00000515662 VGLL2Q8N8G2 317 aa18.6■□□□□ 0.57
THUMPD3-210ENST00000515662 RBM8AQ9Y5S9 174 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms