RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 IFT43Q96FT9 208 aa8.51□□□□□ -1.05
LINC01088-211ENST00000515597 ZBTB42B2RXF5 422 aa8.5□□□□□ -1.05
LINC01088-211ENST00000515597 C9orf172C9J069 976 aa8.5□□□□□ -1.05
LINC01088-211ENST00000515597 MAP3K6O95382 1288 aa8.5□□□□□ -1.05
LINC01088-211ENST00000515597 RARAP10276 462 aa8.5□□□□□ -1.05
LINC01088-211ENST00000515597 RFX1P22670 979 aa8.5□□□□□ -1.05
LINC01088-211ENST00000515597 FOXD4L6Q3SYB3 417 aaPredicted RBP8.5□□□□□ -1.05
LINC01088-211ENST00000515597 PERM1Q5SV97 790 aa8.5□□□□□ -1.05
LINC01088-211ENST00000515597 FOXD4L3Q6VB84 417 aaPredicted RBP8.5□□□□□ -1.05
LINC01088-211ENST00000515597 DHX32Q7L7V1 743 aaKnown RBP8.5□□□□□ -1.05
LINC01088-211ENST00000515597 FMR1NBQ8N0W7 255 aaPredicted RBP8.5□□□□□ -1.05
LINC01088-211ENST00000515597 MYO19Q96H55 970 aa8.5□□□□□ -1.05
LINC01088-211ENST00000515597 LPIN3Q9BQK8 851 aa8.5□□□□□ -1.05
LINC01088-211ENST00000515597 LRFN2Q9ULH4 789 aa8.5□□□□□ -1.05
LINC01088-211ENST00000515597 FKBP5Q13451 457 aaPredicted RBP8.49□□□□□ -1.05
LINC01088-211ENST00000515597 C11orf91Q3C1V1 193 aa8.49□□□□□ -1.05
LINC01088-211ENST00000515597 NOVA2Q9UNW9 492 aaKnown RBP8.49□□□□□ -1.05
LINC01088-211ENST00000515597 GRIK5Q16478 980 aa8.48□□□□□ -1.05
LINC01088-211ENST00000515597 PRIMPOLQ96LW4 560 aa8.48□□□□□ -1.05
LINC01088-211ENST00000515597 OPLAHO14841 1288 aa8.47□□□□□ -1.05
LINC01088-211ENST00000515597 PCSK7Q16549 785 aa8.47□□□□□ -1.05
LINC01088-211ENST00000515597 MSL1Q68DK7 614 aa8.47□□□□□ -1.05
LINC01088-211ENST00000515597 HFE2Q6ZVN8 426 aa8.47□□□□□ -1.05
LINC01088-211ENST00000515597 TXNRD3Q86VQ6 643 aa8.47□□□□□ -1.05
LINC01088-211ENST00000515597 RGL4Q8IZJ4 473 aa8.47□□□□□ -1.05
LINC01088-211ENST00000515597 TRPM4Q8TD43 1214 aa8.47□□□□□ -1.05
LINC01088-211ENST00000515597 LENG1Q96BZ8 264 aaPredicted RBP8.47□□□□□ -1.05
LINC01088-211ENST00000515597 USP21Q9UK80 565 aa8.47□□□□□ -1.05
LINC01088-211ENST00000515597 RTCBQ9Y3I0 505 aaKnown RBP8.47□□□□□ -1.05
LINC01088-211ENST00000515597 PRMT3O60678 531 aa8.46□□□□□ -1.06
LINC01088-211ENST00000515597 GPLD1P80108 840 aa8.46□□□□□ -1.06
LINC01088-211ENST00000515597 PRSS36Q5K4E3 855 aa8.46□□□□□ -1.06
LINC01088-211ENST00000515597 ELMSAN1Q6PJG2 1045 aa8.46□□□□□ -1.06
LINC01088-211ENST00000515597 ILDR2Q71H61 639 aa8.46□□□□□ -1.06
LINC01088-211ENST00000515597 TREML1Q86YW5 311 aa8.46□□□□□ -1.06
LINC01088-211ENST00000515597 ZMIZ1Q9ULJ6 1067 aa8.46□□□□□ -1.06
LINC01088-211ENST00000515597 SCO2A0A1W2PP80 73 aa8.45□□□□□ -1.06
LINC01088-211ENST00000515597 EIF2AK2P19525 551 aaKnown RBP8.45□□□□□ -1.06
LINC01088-211ENST00000515597 NRG1Q02297 640 aaPredicted RBP8.45□□□□□ -1.06
LINC01088-211ENST00000515597 COX20Q5RI15 118 aa8.45□□□□□ -1.06
LINC01088-211ENST00000515597 CMTR1Q8N1G2 835 aaKnown RBP8.45□□□□□ -1.06
LINC01088-211ENST00000515597 SMG9Q9H0W8 520 aaKnown RBP8.45□□□□□ -1.06
LINC01088-211ENST00000515597 FRRS1LQ9P0K9 344 aa8.45□□□□□ -1.06
LINC01088-211ENST00000515597 XYLBO75191 536 aa8.44□□□□□ -1.06
LINC01088-211ENST00000515597 WFDC8Q8IUA0 241 aa8.44□□□□□ -1.06
LINC01088-211ENST00000515597 NRLP54845 237 aa8.43□□□□□ -1.06
LINC01088-211ENST00000515597 STK32AQ8WU08 396 aa8.43□□□□□ -1.06
LINC01088-211ENST00000515597 TP53INP1Q96A56 240 aa8.43□□□□□ -1.06
LINC01088-211ENST00000515597 SAP130Q9H0E3 1048 aa8.43□□□□□ -1.06
LINC01088-211ENST00000515597 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.43□□□□□ -1.065e-7■■■■■ 26.9
LINC01088-211ENST00000515597 OCLNQ16625 522 aa8.42□□□□□ -1.06
LINC01088-211ENST00000515597 FBXO11Q86XK2 927 aa8.42□□□□□ -1.06
LINC01088-211ENST00000515597 C11orf16Q9NQ32 467 aa8.42□□□□□ -1.06
LINC01088-211ENST00000515597 TLR7Q9NYK1 1049 aaKnown RBP8.42□□□□□ -1.06
LINC01088-211ENST00000515597 KCNMB2Q9Y691 235 aa8.42□□□□□ -1.06
LINC01088-211ENST00000515597 ACIN1Q9UKV3 1341 aaKnown RBP8.42□□□□□ -1.06
LINC01088-211ENST00000515597 J3QW42 95 aa8.41□□□□□ -1.06
LINC01088-211ENST00000515597 MMP20O60882 483 aa8.41□□□□□ -1.06
LINC01088-211ENST00000515597 DEAF1O75398 565 aaPredicted RBP8.41□□□□□ -1.06
LINC01088-211ENST00000515597 EGFRP00533 1210 aa8.41□□□□□ -1.06
LINC01088-211ENST00000515597 H2AFB1P0C5Y9 115 aa8.41□□□□□ -1.06
LINC01088-211ENST00000515597 H2AFB2P0C5Z0 115 aa8.41□□□□□ -1.06
LINC01088-211ENST00000515597 ARID4AP29374 1257 aaPredicted RBP8.41□□□□□ -1.06
LINC01088-211ENST00000515597 SWI5Q1ZZU3 235 aa8.41□□□□□ -1.06
LINC01088-211ENST00000515597 FAM26DQ5JW98 314 aa8.41□□□□□ -1.06
LINC01088-211ENST00000515597 ETFBKMTQ8IXQ9 262 aa8.41□□□□□ -1.06
LINC01088-211ENST00000515597 DTWD1Q8N5C7 304 aa8.41□□□□□ -1.06
LINC01088-211ENST00000515597 NSUN5Q96P11 429 aaKnown RBP8.41□□□□□ -1.06
LINC01088-211ENST00000515597 MKNK1Q9BUB5 465 aa8.41□□□□□ -1.06
LINC01088-211ENST00000515597 SSBP4Q9BWG4 385 aaPredicted RBP8.41□□□□□ -1.06
LINC01088-211ENST00000515597 FAM69CQ0P6D2 419 aa8.4□□□□□ -1.06
LINC01088-211ENST00000515597 TRIP4Q15650 581 aaPredicted RBP8.4□□□□□ -1.06
LINC01088-211ENST00000515597 CAPN12Q6ZSI9 719 aa8.4□□□□□ -1.06
LINC01088-211ENST00000515597 TTC9Q92623 222 aa8.4□□□□□ -1.06
LINC01088-211ENST00000515597 PLD4Q96BZ4 506 aa8.4□□□□□ -1.06
LINC01088-211ENST00000515597 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.39□□□□□ -1.07
LINC01088-211ENST00000515597 PSAPP07602 524 aa8.39□□□□□ -1.07
LINC01088-211ENST00000515597 NOS3P29474 1203 aa8.39□□□□□ -1.07
LINC01088-211ENST00000515597 IREB2P48200 963 aaKnown RBP8.39□□□□□ -1.07
LINC01088-211ENST00000515597 GDF6Q6KF10 455 aaPredicted RBP8.39□□□□□ -1.07
LINC01088-211ENST00000515597 WFDC12Q8WWY7 111 aa8.39□□□□□ -1.07
LINC01088-211ENST00000515597 C16orf46Q6P387 395 aa8.38□□□□□ -1.07
LINC01088-211ENST00000515597 LOC102724428A0A0B4J2F2 783 aa8.37□□□□□ -1.07
LINC01088-211ENST00000515597 TNFRSF10BO14763 440 aa8.37□□□□□ -1.07
LINC01088-211ENST00000515597 GHRHP01286 108 aa8.37□□□□□ -1.07
LINC01088-211ENST00000515597 SIK1P57059 783 aa8.37□□□□□ -1.07
LINC01088-211ENST00000515597 ELOAQ14241 798 aaKnown RBP8.37□□□□□ -1.07
LINC01088-211ENST00000515597 MEGF10Q96KG7 1140 aa8.37□□□□□ -1.07
LINC01088-211ENST00000515597 CXXC1Q9P0U4 656 aaPredicted RBP8.37□□□□□ -1.07
LINC01088-211ENST00000515597 BRD2P25440 801 aaKnown RBP8.36□□□□□ -1.07
LINC01088-211ENST00000515597 NAA30Q147X3 362 aaPredicted RBP8.36□□□□□ -1.07
LINC01088-211ENST00000515597 ARTNQ5T4W7 220 aa8.36□□□□□ -1.07
LINC01088-211ENST00000515597 DLL1O00548 723 aa8.35□□□□□ -1.07
LINC01088-211ENST00000515597 SRPK2P78362 688 aaKnown RBP8.35□□□□□ -1.07
LINC01088-211ENST00000515597 TMEM164Q5U3C3 297 aa8.35□□□□□ -1.07
LINC01088-211ENST00000515597 IGF2-ASQ6U949 168 aa8.35□□□□□ -1.07
LINC01088-211ENST00000515597 KRTAP4-8Q9BYQ9 185 aa8.35□□□□□ -1.07
LINC01088-211ENST00000515597 ZFP64Q9NPA5 681 aa8.35□□□□□ -1.07
LINC01088-211ENST00000515597 TRIM33Q9UPN9 1127 aa8.35□□□□□ -1.07
LINC01088-211ENST00000515597 HOXD8P13378 290 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms