RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 FMR1Q06787 632 aaKnown RBP eCLIP19.63■□□□□ 0.73
DDR1-278ENST00000515233 KRT24Q2M2I5 525 aa19.63■□□□□ 0.73
DDR1-278ENST00000515233 CST9Q5W186 159 aa19.63■□□□□ 0.73
DDR1-278ENST00000515233 TMC4Q7Z404 712 aa19.63■□□□□ 0.73
DDR1-278ENST00000515233 CCDC146Q8IYE0 955 aa19.63■□□□□ 0.73
DDR1-278ENST00000515233 ANKRD13DQ6ZTN6 518 aa19.62■□□□□ 0.73
DDR1-278ENST00000515233 PLBD2Q8NHP8 589 aa19.62■□□□□ 0.73
DDR1-278ENST00000515233 PGAP2Q9UHJ9 254 aa19.62■□□□□ 0.73
DDR1-278ENST00000515233 TRPM7Q96QT4 1865 aa19.62■□□□□ 0.73
DDR1-278ENST00000515233 CDHR2Q9BYE9 1310 aa19.61■□□□□ 0.73
DDR1-278ENST00000515233 LBX1P52954 281 aa19.61■□□□□ 0.73
DDR1-278ENST00000515233 CIAPIN1Q6FI81 312 aa19.61■□□□□ 0.73
DDR1-278ENST00000515233 CHPF2Q9P2E5 772 aa19.61■□□□□ 0.73
DDR1-278ENST00000515233 DBF4Q9UBU7 674 aaPredicted RBP19.61■□□□□ 0.73
DDR1-278ENST00000515233 ECE1P42892 770 aa19.6■□□□□ 0.73
DDR1-278ENST00000515233 DDX10Q13206 875 aaKnown RBP19.6■□□□□ 0.73
DDR1-278ENST00000515233 TNIP1Q15025 636 aa19.6■□□□□ 0.73
DDR1-278ENST00000515233 HDGFL1Q5TGJ6 251 aa19.6■□□□□ 0.73
DDR1-278ENST00000515233 ISCA1Q9BUE6 129 aa19.6■□□□□ 0.73
DDR1-278ENST00000515233 LAS1LQ9Y4W2 734 aaKnown RBP19.6■□□□□ 0.73
DDR1-278ENST00000515233 TLL2Q9Y6L7 1015 aa19.6■□□□□ 0.73
DDR1-278ENST00000515233 TAF1P21675 1872 aa19.59■□□□□ 0.73
DDR1-278ENST00000515233 TRAF5O00463 557 aa19.59■□□□□ 0.73
DDR1-278ENST00000515233 GMPSP49915 693 aaPredicted RBP19.59■□□□□ 0.73
DDR1-278ENST00000515233 WDR43Q15061 677 aaKnown RBP eCLIP19.59■□□□□ 0.73
DDR1-278ENST00000515233 SF3B3Q15393 1217 aaKnown RBP19.59■□□□□ 0.73
DDR1-278ENST00000515233 ZC3H15Q8WU90 426 aaKnown RBP19.59■□□□□ 0.73
DDR1-278ENST00000515233 CAPNS2Q96L46 248 aa19.59■□□□□ 0.73
DDR1-278ENST00000515233 CFAP44Q96MT7 982 aa19.59■□□□□ 0.73
DDR1-278ENST00000515233 HSPA8P11142 646 aaKnown RBP19.58■□□□□ 0.72
DDR1-278ENST00000515233 ADAMTS8Q9UP79 889 aa19.58■□□□□ 0.72
DDR1-278ENST00000515233 RAD17O75943 681 aa19.57■□□□□ 0.72
DDR1-278ENST00000515233 TRIM28Q13263 835 aaKnown RBP19.57■□□□□ 0.72
DDR1-278ENST00000515233 CYP4F22Q6NT55 531 aa19.57■□□□□ 0.72
DDR1-278ENST00000515233 FAM89AQ96GI7 184 aa19.57■□□□□ 0.72
DDR1-278ENST00000515233 GPR101Q96P66 508 aaPredicted RBP19.57■□□□□ 0.72
DDR1-278ENST00000515233 BCL2L13Q9BXK5 485 aa19.57■□□□□ 0.72
DDR1-278ENST00000515233 HYPKQ9NX55 129 aa19.57■□□□□ 0.72
DDR1-278ENST00000515233 THSD7BQ9C0I4 1608 aa19.57■□□□□ 0.72
DDR1-278ENST00000515233 LRRC37AA6NMS7 1700 aa19.56■□□□□ 0.72
DDR1-278ENST00000515233 DDX60Q8IY21 1712 aaKnown RBP19.56■□□□□ 0.72
DDR1-278ENST00000515233 YDJCA8MPS7 323 aa19.56■□□□□ 0.72
DDR1-278ENST00000515233 HIRAP54198 1017 aaPredicted RBP19.56■□□□□ 0.72
DDR1-278ENST00000515233 SAPCD2Q86UD0 394 aa19.56■□□□□ 0.72
DDR1-278ENST00000515233 HHIPL1Q96JK4 782 aa19.56■□□□□ 0.72
DDR1-278ENST00000515233 MAP2K2P36507 400 aa19.55■□□□□ 0.72
DDR1-278ENST00000515233 DUOX1Q9NRD9 1551 aa19.55■□□□□ 0.72
DDR1-278ENST00000515233 CNOT7Q9UIV1 285 aaKnown RBP19.55■□□□□ 0.72
DDR1-278ENST00000515233 ATP5J2-PTCD1G3V325 749 aa19.54■□□□□ 0.72
DDR1-278ENST00000515233 WASHC4Q2M389 1173 aa19.54■□□□□ 0.72
DDR1-278ENST00000515233 DUSP27Q5VZP5 1158 aa19.54■□□□□ 0.72
DDR1-278ENST00000515233 PAXIP1Q6ZW49 1069 aaPredicted RBP19.54■□□□□ 0.72
DDR1-278ENST00000515233 CDC37L1Q7L3B6 337 aa19.54■□□□□ 0.72
DDR1-278ENST00000515233 DPF2Q92785 391 aa19.54■□□□□ 0.72
DDR1-278ENST00000515233 CELF1Q92879 486 aaKnown RBP19.54■□□□□ 0.72
DDR1-278ENST00000515233 BEGAINQ9BUH8 593 aa19.54■□□□□ 0.72
DDR1-278ENST00000515233 NSFL1CQ9UNZ2 370 aaKnown RBP19.54■□□□□ 0.72
DDR1-278ENST00000515233 H7C1D1 291 aa19.53■□□□□ 0.72
DDR1-278ENST00000515233 CELF2O95319 508 aaKnown RBP19.53■□□□□ 0.72
DDR1-278ENST00000515233 ZNF853P0CG23 659 aa19.53■□□□□ 0.72
DDR1-278ENST00000515233 ZNF428Q96B54 188 aa19.53■□□□□ 0.72
DDR1-278ENST00000515233 GLIS2Q9BZE0 524 aaPredicted RBP19.53■□□□□ 0.72
DDR1-278ENST00000515233 MBIPQ9NS73 344 aa19.53■□□□□ 0.72
DDR1-278ENST00000515233 IRS4O14654 1257 aaPredicted RBP19.51■□□□□ 0.71
DDR1-278ENST00000515233 RPS8P62241 208 aaKnown RBP19.51■□□□□ 0.71
DDR1-278ENST00000515233 GRM1Q13255 1194 aa19.51■□□□□ 0.71
DDR1-278ENST00000515233 TRPM4Q8TD43 1214 aa19.51■□□□□ 0.71
DDR1-278ENST00000515233 POLLQ9UGP5 575 aa19.51■□□□□ 0.71
DDR1-278ENST00000515233 RTL5Q5HYW3 569 aaPredicted RBP19.5■□□□□ 0.71
DDR1-278ENST00000515233 MICALL2Q8IY33 904 aa19.5■□□□□ 0.71
DDR1-278ENST00000515233 ZBTB38Q8NAP3 1195 aaPredicted RBP19.5■□□□□ 0.71
DDR1-278ENST00000515233 EYA3Q99504 573 aa19.5■□□□□ 0.71
DDR1-278ENST00000515233 ZBTB12Q9Y330 459 aaPredicted RBP19.5■□□□□ 0.71
DDR1-278ENST00000515233 SHTN1A0MZ66 631 aa19.49■□□□□ 0.71
DDR1-278ENST00000515233 C6orf229H3BNL8 230 aa19.49■□□□□ 0.71
DDR1-278ENST00000515233 PSMD14O00487 310 aa19.49■□□□□ 0.71
DDR1-278ENST00000515233 AOC2O75106 756 aa19.49■□□□□ 0.71
DDR1-278ENST00000515233 RPS12P25398 132 aaKnown RBP19.49■□□□□ 0.71
DDR1-278ENST00000515233 GPSM2P81274 684 aa19.49■□□□□ 0.71
DDR1-278ENST00000515233 RIC3Q7Z5B4 369 aa19.49■□□□□ 0.71
DDR1-278ENST00000515233 DBNDD1Q9H9R9 158 aa19.49■□□□□ 0.71
DDR1-278ENST00000515233 RIMBP2O15034 1052 aa19.48■□□□□ 0.71
DDR1-278ENST00000515233 HSP90B1P14625 803 aaKnown RBP19.48■□□□□ 0.71
DDR1-278ENST00000515233 GNAI1P63096 354 aa19.48■□□□□ 0.71
DDR1-278ENST00000515233 TBC1D16Q8TBP0 767 aa19.48■□□□□ 0.71
DDR1-278ENST00000515233 ABHD8Q96I13 439 aa19.48■□□□□ 0.71
DDR1-278ENST00000515233 PHAXQ9H814 394 aaKnown RBP19.48■□□□□ 0.71
DDR1-278ENST00000515233 PRKRIP1Q9H875 184 aaPredicted RBP19.48■□□□□ 0.71
DDR1-278ENST00000515233 IFT57Q9NWB7 429 aa19.48■□□□□ 0.71
DDR1-278ENST00000515233 PODXL2Q9NZ53 605 aa19.48■□□□□ 0.71
DDR1-278ENST00000515233 COL4A1P02462 1669 aa19.47■□□□□ 0.71
DDR1-278ENST00000515233 CA12O43570 354 aa19.47■□□□□ 0.71
DDR1-278ENST00000515233 CALD1Q05682 793 aaKnown RBP19.47■□□□□ 0.71
DDR1-278ENST00000515233 GOLGA2Q08379 1002 aa19.47■□□□□ 0.71
DDR1-278ENST00000515233 SAMD7Q7Z3H4 446 aa19.47■□□□□ 0.71
DDR1-278ENST00000515233 ZNF408Q9H9D4 720 aa19.47■□□□□ 0.71
DDR1-278ENST00000515233 APAF1O14727 1248 aa19.46■□□□□ 0.71
DDR1-278ENST00000515233 ECE2O60344 883 aa19.46■□□□□ 0.71
DDR1-278ENST00000515233 BRPF1P55201 1214 aaPredicted RBP19.46■□□□□ 0.71
DDR1-278ENST00000515233 USP48Q86UV5 1035 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms