RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 TCEANC2Q96MN5 208 aa16.67■□□□□ 0.26
TRIO-222ENST00000515144 PEG3Q9GZU2 1588 aa16.66■□□□□ 0.26
TRIO-222ENST00000515144 TAF3Q5VWG9 929 aa16.66■□□□□ 0.26
TRIO-222ENST00000515144 MCM9Q9NXL9 1143 aa16.66■□□□□ 0.26
TRIO-222ENST00000515144 ABCC11Q96J66 1382 aa16.66■□□□□ 0.26
TRIO-222ENST00000515144 ERLIN2O94905 339 aa16.66■□□□□ 0.26
TRIO-222ENST00000515144 PRKCSHP14314 528 aaPredicted RBP16.66■□□□□ 0.26
TRIO-222ENST00000515144 IDEP14735 1019 aa16.66■□□□□ 0.26
TRIO-222ENST00000515144 TCP10Q12799 353 aa16.66■□□□□ 0.26
TRIO-222ENST00000515144 H0YIN7 160 aa16.66■□□□□ 0.26
TRIO-222ENST00000515144 BIN1O00499 593 aa16.66■□□□□ 0.26
TRIO-222ENST00000515144 WTAPQ15007 396 aa16.66■□□□□ 0.26
TRIO-222ENST00000515144 BICC1Q9H694 974 aaKnown RBP16.66■□□□□ 0.26
TRIO-222ENST00000515144 UFL1O94874 794 aa16.66■□□□□ 0.26
TRIO-222ENST00000515144 SLAIN2Q9P270 581 aa16.66■□□□□ 0.26
TRIO-222ENST00000515144 HOXC9P31274 260 aa16.66■□□□□ 0.26
TRIO-222ENST00000515144 AXDND1Q5T1B0 1012 aaPredicted RBP16.66■□□□□ 0.26
TRIO-222ENST00000515144 ECHDC1Q9NTX5 307 aa16.66■□□□□ 0.26
TRIO-222ENST00000515144 CTNNBL1Q8WYA6 563 aaPredicted RBP16.66■□□□□ 0.26
TRIO-222ENST00000515144 ARGLU1Q9NWB6 273 aaPredicted RBP16.66■□□□□ 0.26
TRIO-222ENST00000515144 CALML4Q96GE6 196 aa16.65■□□□□ 0.26
TRIO-222ENST00000515144 GDPD2Q9HCC8 539 aa16.65■□□□□ 0.26
TRIO-222ENST00000515144 ZKSCAN3Q9BRR0 538 aa16.65■□□□□ 0.26
TRIO-222ENST00000515144 PKD2L1Q9P0L9 805 aa16.65■□□□□ 0.26
TRIO-222ENST00000515144 ANKRD36BQ8N2N9 1353 aa16.65■□□□□ 0.26
TRIO-222ENST00000515144 ABCC10Q5T3U5 1492 aa16.65■□□□□ 0.26
TRIO-222ENST00000515144 RPRD2Q5VT52 1461 aaKnown RBP16.65■□□□□ 0.26
TRIO-222ENST00000515144 ZNF354CQ86Y25 554 aa16.65■□□□□ 0.26
TRIO-222ENST00000515144 CNNM3Q8NE01 707 aa16.65■□□□□ 0.26
TRIO-222ENST00000515144 CFAP74Q9C0B2 1584 aa16.65■□□□□ 0.26
TRIO-222ENST00000515144 WDR62O43379 1518 aa16.65■□□□□ 0.26
TRIO-222ENST00000515144 DNAI2Q9GZS0 605 aa16.65■□□□□ 0.26
TRIO-222ENST00000515144 LDHBP07195 334 aaKnown RBP16.64■□□□□ 0.26
TRIO-222ENST00000515144 NCOA7Q8NI08 942 aa16.64■□□□□ 0.25
TRIO-222ENST00000515144 HMGB1P09429 215 aaKnown RBP16.64■□□□□ 0.25
TRIO-222ENST00000515144 FAM43AQ8N2R8 423 aa16.64■□□□□ 0.25
TRIO-222ENST00000515144 EYA1Q99502 592 aa16.64■□□□□ 0.25
TRIO-222ENST00000515144 GCC2Q8IWJ2 1684 aa16.64■□□□□ 0.25
TRIO-222ENST00000515144 UIMC1Q96RL1 719 aa16.64■□□□□ 0.25
TRIO-222ENST00000515144 BCS1LQ9Y276 419 aa16.64■□□□□ 0.25
TRIO-222ENST00000515144 SYCE3A1L190 88 aa16.64■□□□□ 0.25
TRIO-222ENST00000515144 KIF20AO95235 890 aa16.64■□□□□ 0.25
TRIO-222ENST00000515144 IARSP41252 1262 aaKnown RBP16.63■□□□□ 0.25
TRIO-222ENST00000515144 CPLX3Q8WVH0 158 aa16.63■□□□□ 0.25
TRIO-222ENST00000515144 RXRAP19793 462 aa16.63■□□□□ 0.25
TRIO-222ENST00000515144 BEGAINQ9BUH8 593 aa16.63■□□□□ 0.25
TRIO-222ENST00000515144 NECAB1Q8N987 351 aa16.63■□□□□ 0.25
TRIO-222ENST00000515144 UQCRFS1P1P0C7P4 283 aa16.63■□□□□ 0.25
TRIO-222ENST00000515144 NEK1Q96PY6 1258 aa16.63■□□□□ 0.25
TRIO-222ENST00000515144 PICK1Q9NRD5 415 aa16.63■□□□□ 0.25
TRIO-222ENST00000515144 TCP11L1Q9NUJ3 509 aa16.63■□□□□ 0.25
TRIO-222ENST00000515144 RNMTO43148 476 aaKnown RBP16.62■□□□□ 0.25
TRIO-222ENST00000515144 POLKQ9UBT6 870 aa16.62■□□□□ 0.25
TRIO-222ENST00000515144 KDM5AP29375 1690 aaKnown RBP16.62■□□□□ 0.25
TRIO-222ENST00000515144 ATP7AQ04656 1500 aa16.62■□□□□ 0.25
TRIO-222ENST00000515144 GJB2P29033 226 aa16.62■□□□□ 0.25
TRIO-222ENST00000515144 ARHGAP27Q6ZUM4 889 aa16.62■□□□□ 0.25
TRIO-222ENST00000515144 ACBD3Q9H3P7 528 aa16.62■□□□□ 0.25
TRIO-222ENST00000515144 MAP3K5Q99683 1374 aa16.62■□□□□ 0.25
TRIO-222ENST00000515144 EPB41L2O43491 1005 aaKnown RBP16.62■□□□□ 0.25
TRIO-222ENST00000515144 TRIM37O94972 964 aa16.62■□□□□ 0.25
TRIO-222ENST00000515144 A1BGP04217 495 aa16.62■□□□□ 0.25
TRIO-222ENST00000515144 QTRT2Q9H974 415 aaKnown RBP16.62■□□□□ 0.25
TRIO-222ENST00000515144 TAF5LO75529 589 aa16.62■□□□□ 0.25
TRIO-222ENST00000515144 MAST1Q9Y2H9 1570 aa16.62■□□□□ 0.25
TRIO-222ENST00000515144 LARGE2Q8N3Y3 721 aa16.61■□□□□ 0.25
TRIO-222ENST00000515144 ZNF594Q96JF6 807 aaPredicted RBP16.61■□□□□ 0.25
TRIO-222ENST00000515144 TFCP2Q12800 502 aa16.61■□□□□ 0.25
TRIO-222ENST00000515144 PHAXQ9H814 394 aaKnown RBP16.61■□□□□ 0.25
TRIO-222ENST00000515144 NSD2O96028 1365 aa16.61■□□□□ 0.25
TRIO-222ENST00000515144 CCDC12Q8WUD4 166 aaPredicted RBP16.61■□□□□ 0.25
TRIO-222ENST00000515144 CBFA2T2O43439 604 aa16.6■□□□□ 0.25
TRIO-222ENST00000515144 YTHDC2Q9H6S0 1430 aaKnown RBP16.6■□□□□ 0.25
TRIO-222ENST00000515144 KSR2Q6VAB6 950 aa16.6■□□□□ 0.25
TRIO-222ENST00000515144 PAG1Q9NWQ8 432 aa16.6■□□□□ 0.25
TRIO-222ENST00000515144 ATP10AO60312 1499 aa16.6■□□□□ 0.25
TRIO-222ENST00000515144 GBP2P32456 591 aaPredicted RBP16.6■□□□□ 0.25
TRIO-222ENST00000515144 NAPAP54920 295 aa16.6■□□□□ 0.25
TRIO-222ENST00000515144 TBC1D9Q6ZT07 1266 aa16.6■□□□□ 0.25
TRIO-222ENST00000515144 HSP90AA4PQ58FG1 418 aa16.6■□□□□ 0.25
TRIO-222ENST00000515144 TRPM2O94759 1503 aa16.6■□□□□ 0.25
TRIO-222ENST00000515144 PRC1O43663 620 aa16.6■□□□□ 0.25
TRIO-222ENST00000515144 MCM5P33992 734 aa16.6■□□□□ 0.25
TRIO-222ENST00000515144 MAP3K11Q16584 847 aa16.6■□□□□ 0.25
TRIO-222ENST00000515144 KLF18A0A0U1RQI7 1052 aa16.59■□□□□ 0.25
TRIO-222ENST00000515144 SMARCC2Q8TAQ2 1214 aa16.59■□□□□ 0.25
TRIO-222ENST00000515144 DCAF5Q96JK2 942 aa16.59■□□□□ 0.25
TRIO-222ENST00000515144 ORC3Q9UBD5 711 aaPredicted RBP16.59■□□□□ 0.25
TRIO-222ENST00000515144 FLT4P35916 1363 aa16.59■□□□□ 0.25
TRIO-222ENST00000515144 FKBP15Q5T1M5 1219 aa16.59■□□□□ 0.25
TRIO-222ENST00000515144 ABCC2Q92887 1545 aa16.59■□□□□ 0.25
TRIO-222ENST00000515144 GOPCQ9HD26 462 aa16.59■□□□□ 0.25
TRIO-222ENST00000515144 CEP170Q5SW79 1584 aa16.59■□□□□ 0.25
TRIO-222ENST00000515144 A0A1W2PP64 1363 aa16.59■□□□□ 0.25
TRIO-222ENST00000515144 TDRD12Q587J7 1177 aaKnown RBP16.59■□□□□ 0.25
TRIO-222ENST00000515144 IP6K1Q92551 441 aa16.59■□□□□ 0.25
TRIO-222ENST00000515144 AFMP43652 599 aa16.59■□□□□ 0.25
TRIO-222ENST00000515144 RHPN1Q8TCX5 695 aa16.59■□□□□ 0.25
TRIO-222ENST00000515144 BACH2Q9BYV9 841 aa16.59■□□□□ 0.25
TRIO-222ENST00000515144 GOLGA6L10A6NI86 522 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms