RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 MMP10P09238 476 aa20.92■□□□□ 0.94
AP3S1-208ENST00000515066 FAM161AQ3B820 660 aa20.92■□□□□ 0.94
AP3S1-208ENST00000515066 C3orf67Q6ZVT6 689 aa20.92■□□□□ 0.94
AP3S1-208ENST00000515066 GCC1Q96CN9 775 aa20.91■□□□□ 0.94
AP3S1-208ENST00000515066 PA2G4Q9UQ80 394 aaKnown RBP20.91■□□□□ 0.94
AP3S1-208ENST00000515066 LRP5O75197 1615 aa20.91■□□□□ 0.94
AP3S1-208ENST00000515066 GTF2E1P29083 439 aaPredicted RBP20.9■□□□□ 0.94
AP3S1-208ENST00000515066 PTPN12Q05209 780 aaKnown RBP20.9■□□□□ 0.94
AP3S1-208ENST00000515066 KLHDC4Q8TBB5 520 aa20.9■□□□□ 0.94
AP3S1-208ENST00000515066 CCDC85AQ96PX6 553 aaPredicted RBP20.9■□□□□ 0.94
AP3S1-208ENST00000515066 GREM2Q9H772 168 aa20.9■□□□□ 0.94
AP3S1-208ENST00000515066 EXOC6BQ9Y2D4 811 aa20.9■□□□□ 0.94
AP3S1-208ENST00000515066 HSP90B1P14625 803 aaKnown RBP20.89■□□□□ 0.94
AP3S1-208ENST00000515066 R3HDM1Q15032 1099 aaKnown RBP20.89■□□□□ 0.94
AP3S1-208ENST00000515066 SLC16A10Q8TF71 515 aa20.89■□□□□ 0.94
AP3S1-208ENST00000515066 NOP58Q9Y2X3 529 aaKnown RBP20.89■□□□□ 0.94
AP3S1-208ENST00000515066 CHMP3Q9Y3E7 222 aa20.89■□□□□ 0.94
AP3S1-208ENST00000515066 COPRSQ9NQ92 184 aa20.89■□□□□ 0.93
AP3S1-208ENST00000515066 RTL9Q8NET4 1388 aa20.89■□□□□ 0.93
AP3S1-208ENST00000515066 COL11A2P13942 1736 aaPredicted RBP20.88■□□□□ 0.93
AP3S1-208ENST00000515066 SF3B3Q15393 1217 aaKnown RBP20.87■□□□□ 0.93
AP3S1-208ENST00000515066 NPHP1O15259 732 aa20.86■□□□□ 0.93
AP3S1-208ENST00000515066 SURF6O75683 361 aaKnown RBP20.86■□□□□ 0.93
AP3S1-208ENST00000515066 ITGA6P23229 1130 aa20.86■□□□□ 0.93
AP3S1-208ENST00000515066 SKAP1Q86WV1 359 aa20.86■□□□□ 0.93
AP3S1-208ENST00000515066 PDZRN3Q9UPQ7 1066 aa20.86■□□□□ 0.93
AP3S1-208ENST00000515066 A0A1B0GUL6 1792 aa20.86■□□□□ 0.93
AP3S1-208ENST00000515066 NUCB1Q02818 461 aa20.86■□□□□ 0.93
AP3S1-208ENST00000515066 CCDC152Q4G0S7 254 aa20.86■□□□□ 0.93
AP3S1-208ENST00000515066 ZNF594Q96JF6 807 aaPredicted RBP20.86■□□□□ 0.93
AP3S1-208ENST00000515066 PARP3Q9Y6F1 533 aa20.86■□□□□ 0.93
AP3S1-208ENST00000515066 ST5P78524 1137 aa20.85■□□□□ 0.93
AP3S1-208ENST00000515066 IFIT5Q13325 482 aaKnown RBP20.85■□□□□ 0.93
AP3S1-208ENST00000515066 CCDC57Q2TAC2 916 aa20.85■□□□□ 0.93
AP3S1-208ENST00000515066 SIL1Q9H173 461 aa20.85■□□□□ 0.93
AP3S1-208ENST00000515066 KIF13BQ9NQT8 1826 aa20.85■□□□□ 0.93
AP3S1-208ENST00000515066 GOLGB1Q14789 3259 aaKnown RBP20.84■□□□□ 0.93
AP3S1-208ENST00000515066 NLRP3Q96P20 1036 aa20.84■□□□□ 0.93
AP3S1-208ENST00000515066 SEC31BQ9NQW1 1179 aa20.84■□□□□ 0.93
AP3S1-208ENST00000515066 ANKRD18BA2A2Z9 1011 aa20.83■□□□□ 0.92
AP3S1-208ENST00000515066 KLRG2A4D1S0 409 aaPredicted RBP20.83■□□□□ 0.92
AP3S1-208ENST00000515066 PSDA5PKW4 1024 aaPredicted RBP20.83■□□□□ 0.92
AP3S1-208ENST00000515066 APBB1O00213 710 aa20.83■□□□□ 0.92
AP3S1-208ENST00000515066 CRY2Q49AN0 593 aa20.83■□□□□ 0.92
AP3S1-208ENST00000515066 ANKRD45Q5TZF3 282 aa20.83■□□□□ 0.92
AP3S1-208ENST00000515066 ZBTB7AO95365 584 aa20.82■□□□□ 0.92
AP3S1-208ENST00000515066 ATG9AQ7Z3C6 839 aa20.82■□□□□ 0.92
AP3S1-208ENST00000515066 CHD1LQ86WJ1 897 aa20.82■□□□□ 0.92
AP3S1-208ENST00000515066 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.82■□□□□ 0.92
AP3S1-208ENST00000515066 CACNA1SQ13698 1873 aa20.81■□□□□ 0.92
AP3S1-208ENST00000515066 SMARCA5O60264 1052 aaPredicted RBP20.81■□□□□ 0.92
AP3S1-208ENST00000515066 RAB11FIP3O75154 756 aa20.81■□□□□ 0.92
AP3S1-208ENST00000515066 SASH1O94885 1247 aa20.81■□□□□ 0.92
AP3S1-208ENST00000515066 HSP90AB4PQ58FF6 505 aa20.81■□□□□ 0.92
AP3S1-208ENST00000515066 PUS3Q9BZE2 481 aaKnown RBP20.81■□□□□ 0.92
AP3S1-208ENST00000515066 LNPKQ9C0E8 428 aa20.81■□□□□ 0.92
AP3S1-208ENST00000515066 MTFR1LQ9H019 292 aa20.81■□□□□ 0.92
AP3S1-208ENST00000515066 LRRC24Q50LG9 513 aa20.8■□□□□ 0.92
AP3S1-208ENST00000515066 RHPN1Q8TCX5 695 aa20.8■□□□□ 0.92
AP3S1-208ENST00000515066 BRIP1Q9BX63 1249 aa20.8■□□□□ 0.92
AP3S1-208ENST00000515066 LRRCC1Q9C099 1032 aa20.8■□□□□ 0.92
AP3S1-208ENST00000515066 DLEC1Q9Y238 1755 aa20.8■□□□□ 0.92
AP3S1-208ENST00000515066 EYA2O00167 538 aa20.8■□□□□ 0.92
AP3S1-208ENST00000515066 CIAO1O76071 339 aa20.8■□□□□ 0.92
AP3S1-208ENST00000515066 PDE4AP27815 886 aa20.8■□□□□ 0.92
AP3S1-208ENST00000515066 G3BP1Q13283 466 aaKnown RBP eCLIP20.8■□□□□ 0.92
AP3S1-208ENST00000515066 KIF1BPQ96EK5 621 aa20.8■□□□□ 0.92
AP3S1-208ENST00000515066 C10orf71Q711Q0 1435 aa20.79■□□□□ 0.92
AP3S1-208ENST00000515066 FBXO3Q9UK99 471 aa20.79■□□□□ 0.92
AP3S1-208ENST00000515066 SRCAPQ6ZRS2 3230 aa20.78■□□□□ 0.92
AP3S1-208ENST00000515066 OS9Q13438 667 aaPredicted RBP20.78■□□□□ 0.92
AP3S1-208ENST00000515066 TAF7LQ5H9L4 462 aa20.78■□□□□ 0.92
AP3S1-208ENST00000515066 ERC1Q8IUD2 1116 aa20.78■□□□□ 0.92
AP3S1-208ENST00000515066 RIPOR2Q9Y4F9 1068 aa20.78■□□□□ 0.92
AP3S1-208ENST00000515066 KIAA1551Q9HCM1 1747 aa20.78■□□□□ 0.92
AP3S1-208ENST00000515066 CELF1Q92879 486 aaKnown RBP20.77■□□□□ 0.92
AP3S1-208ENST00000515066 SGIP1Q9BQI5 828 aa20.77■□□□□ 0.92
AP3S1-208ENST00000515066 IL1RAPL2Q9NP60 686 aa20.77■□□□□ 0.92
AP3S1-208ENST00000515066 ATF5Q9Y2D1 282 aaPredicted RBP20.77■□□□□ 0.92
AP3S1-208ENST00000515066 IL15P40933 162 aaPredicted RBP20.77■□□□□ 0.91
AP3S1-208ENST00000515066 LDHAL6AQ6ZMR3 332 aa20.77■□□□□ 0.91
AP3S1-208ENST00000515066 CDC5LQ99459 802 aaKnown RBP20.77■□□□□ 0.91
AP3S1-208ENST00000515066 C16orf71Q8IYS4 520 aaPredicted RBP20.76■□□□□ 0.91
AP3S1-208ENST00000515066 LRRC37AA6NMS7 1700 aa20.76■□□□□ 0.91
AP3S1-208ENST00000515066 TFCP2Q12800 502 aa20.75■□□□□ 0.91
AP3S1-208ENST00000515066 OTUD7AQ8TE49 926 aaPredicted RBP20.75■□□□□ 0.91
AP3S1-208ENST00000515066 SALL3Q9BXA9 1300 aa20.74■□□□□ 0.91
AP3S1-208ENST00000515066 SRGNP10124 158 aa20.74■□□□□ 0.91
AP3S1-208ENST00000515066 HOXA10P31260 410 aaPredicted RBP20.74■□□□□ 0.91
AP3S1-208ENST00000515066 DDX46Q7L014 1031 aaKnown RBP20.74■□□□□ 0.91
AP3S1-208ENST00000515066 ANKRD18AQ8IVF6 992 aa20.74■□□□□ 0.91
AP3S1-208ENST00000515066 VGLL2Q8N8G2 317 aa20.74■□□□□ 0.91
AP3S1-208ENST00000515066 ARAP2Q8WZ64 1704 aa20.74■□□□□ 0.91
AP3S1-208ENST00000515066 PDE6BP35913 854 aa20.73■□□□□ 0.91
AP3S1-208ENST00000515066 IGHMBP2P38935 993 aaKnown RBP20.73■□□□□ 0.91
AP3S1-208ENST00000515066 RPGRQ92834 1020 aaKnown RBP20.73■□□□□ 0.91
AP3S1-208ENST00000515066 CNNM1Q9NRU3 951 aa20.73■□□□□ 0.91
AP3S1-208ENST00000515066 PTGER2P43116 358 aa20.73■□□□□ 0.91
AP3S1-208ENST00000515066 RGS3P49796 1198 aa20.73■□□□□ 0.91
AP3S1-208ENST00000515066 RPS8P62241 208 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms