RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 MICALL1Q8N3F8 863 aa6.57□□□□□ -1.36
CAST-242ENST00000515063 TNFRSF10BO14763 440 aa6.56□□□□□ -1.36
CAST-242ENST00000515063 SASH3O75995 380 aa6.56□□□□□ -1.36
CAST-242ENST00000515063 ALBP02768 609 aa6.56□□□□□ -1.36
CAST-242ENST00000515063 RPLP1P05386 114 aaKnown RBP6.56□□□□□ -1.36
CAST-242ENST00000515063 PSAPP07602 524 aa6.56□□□□□ -1.36
CAST-242ENST00000515063 SPATA31C1P0DKV0 1188 aa6.56□□□□□ -1.36
CAST-242ENST00000515063 GRNP28799 593 aaKnown RBP6.56□□□□□ -1.36
CAST-242ENST00000515063 ZAP70P43403 619 aa6.56□□□□□ -1.36
CAST-242ENST00000515063 GPAT2Q6NUI2 795 aa6.56□□□□□ -1.36
CAST-242ENST00000515063 PLVAPQ9BX97 442 aa6.56□□□□□ -1.36
CAST-242ENST00000515063 STARD13Q9Y3M8 1113 aa6.56□□□□□ -1.36
CAST-242ENST00000515063 UBAP1LF5GYI3 381 aa6.55□□□□□ -1.36
CAST-242ENST00000515063 MSTNO14793 375 aa6.55□□□□□ -1.36
CAST-242ENST00000515063 PCSK2P16519 638 aa6.55□□□□□ -1.36
CAST-242ENST00000515063 COL8A1P27658 744 aa6.55□□□□□ -1.36
CAST-242ENST00000515063 SSFA2P28290 1259 aa6.55□□□□□ -1.36
CAST-242ENST00000515063 NRLP54845 237 aa6.55□□□□□ -1.36
CAST-242ENST00000515063 GPLD1P80108 840 aa6.55□□□□□ -1.36
CAST-242ENST00000515063 PLAURQ03405 335 aa6.55□□□□□ -1.36
CAST-242ENST00000515063 PLA2G4EQ3MJ16 856 aa6.55□□□□□ -1.36
CAST-242ENST00000515063 CAPN12Q6ZSI9 719 aa6.55□□□□□ -1.36
CAST-242ENST00000515063 FAM35AQ86V20 835 aa6.55□□□□□ -1.36
CAST-242ENST00000515063 TRPM4Q8TD43 1214 aa6.55□□□□□ -1.36
CAST-242ENST00000515063 HELQQ8TDG4 1101 aa6.55□□□□□ -1.36
CAST-242ENST00000515063 RBSNQ9H1K0 784 aa6.55□□□□□ -1.36
CAST-242ENST00000515063 SUV39H2Q9H5I1 410 aa6.55□□□□□ -1.36
CAST-242ENST00000515063 JPH1Q9HDC5 661 aaPredicted RBP6.55□□□□□ -1.36
CAST-242ENST00000515063 FRRS1LQ9P0K9 344 aa6.55□□□□□ -1.36
CAST-242ENST00000515063 SLAIN2Q9P270 581 aa6.55□□□□□ -1.36
CAST-242ENST00000515063 RGS9O75916 674 aaPredicted RBP6.54□□□□□ -1.36
CAST-242ENST00000515063 TARSP26639 723 aaKnown RBP6.54□□□□□ -1.36
CAST-242ENST00000515063 SOX18P35713 384 aa6.54□□□□□ -1.36
CAST-242ENST00000515063 ALKBH2Q6NS38 261 aa6.54□□□□□ -1.36
CAST-242ENST00000515063 PSAPL1Q6NUJ1 521 aa6.54□□□□□ -1.36
CAST-242ENST00000515063 C20orf204Q6ZNR8 217 aa6.54□□□□□ -1.36
CAST-242ENST00000515063 NLRP13Q86W25 1043 aa6.54□□□□□ -1.36
CAST-242ENST00000515063 TTC16Q8NEE8 873 aa6.54□□□□□ -1.36
CAST-242ENST00000515063 TRIM11Q96F44 468 aa6.54□□□□□ -1.36
CAST-242ENST00000515063 TLR7Q9NYK1 1049 aaKnown RBP6.54□□□□□ -1.36
CAST-242ENST00000515063 ZFATQ9P243 1243 aa6.54□□□□□ -1.36
CAST-242ENST00000515063 SEPT3Q9UH03 358 aa6.54□□□□□ -1.36
CAST-242ENST00000515063 KCNMB2Q9Y691 235 aa6.54□□□□□ -1.36
CAST-242ENST00000515063 SUPT5HO00267 1087 aaKnown RBP6.53□□□□□ -1.36
CAST-242ENST00000515063 TRIM28Q13263 835 aaKnown RBP6.53□□□□□ -1.36
CAST-242ENST00000515063 ELMSAN1Q6PJG2 1045 aa6.53□□□□□ -1.36
CAST-242ENST00000515063 NACC1Q96RE7 527 aa6.53□□□□□ -1.36
CAST-242ENST00000515063 ARID3AQ99856 593 aa6.53□□□□□ -1.36
CAST-242ENST00000515063 TIMELESSQ9UNS1 1208 aa6.53□□□□□ -1.36
CAST-242ENST00000515063 USP20Q9Y2K6 914 aa6.53□□□□□ -1.36
CAST-242ENST00000515063 KRBA1A5PL33 1030 aa6.52□□□□□ -1.37
CAST-242ENST00000515063 APBA3O96018 575 aa6.52□□□□□ -1.37
CAST-242ENST00000515063 HOXD8P13378 290 aaPredicted RBP6.52□□□□□ -1.37
CAST-242ENST00000515063 NID1P14543 1247 aa6.52□□□□□ -1.37
CAST-242ENST00000515063 CPB1P15086 417 aa6.52□□□□□ -1.37
CAST-242ENST00000515063 RAC1P63000 192 aa6.52□□□□□ -1.37
CAST-242ENST00000515063 NOM1Q5C9Z4 860 aaKnown RBP6.52□□□□□ -1.37
CAST-242ENST00000515063 GPR152Q8TDT2 470 aa6.52□□□□□ -1.37
CAST-242ENST00000515063 FAM13AO94988 1023 aa6.51□□□□□ -1.37
CAST-242ENST00000515063 GHRHP01286 108 aa6.51□□□□□ -1.37
CAST-242ENST00000515063 EIF2AK2P19525 551 aaKnown RBP6.51□□□□□ -1.37
CAST-242ENST00000515063 SF3B2Q13435 895 aaKnown RBP6.51□□□□□ -1.37
CAST-242ENST00000515063 TRAPPC3LQ5T215 181 aa6.51□□□□□ -1.37
CAST-242ENST00000515063 TTC39BQ5VTQ0 682 aaPredicted RBP6.51□□□□□ -1.37
CAST-242ENST00000515063 PDE12Q6L8Q7 609 aaKnown RBP6.51□□□□□ -1.37
CAST-242ENST00000515063 GTF3C2Q8WUA4 911 aaPredicted RBP6.51□□□□□ -1.37
CAST-242ENST00000515063 NUDT8Q8WV74 236 aa6.51□□□□□ -1.37
CAST-242ENST00000515063 TTC9Q92623 222 aa6.51□□□□□ -1.37
CAST-242ENST00000515063 NAGPAQ9UK23 515 aa6.51□□□□□ -1.37
CAST-242ENST00000515063 LOC102724428A0A0B4J2F2 783 aa6.5□□□□□ -1.37
CAST-242ENST00000515063 MMP20O60882 483 aa6.5□□□□□ -1.37
CAST-242ENST00000515063 SIK1P57059 783 aa6.5□□□□□ -1.37
CAST-242ENST00000515063 TRIP4Q15650 581 aaPredicted RBP6.5□□□□□ -1.37
CAST-242ENST00000515063 SPACA7Q96KW9 195 aa6.5□□□□□ -1.37
CAST-242ENST00000515063 SPOCK3Q9BQ16 436 aa6.5□□□□□ -1.37
CAST-242ENST00000515063 ZBTB42B2RXF5 422 aa6.49□□□□□ -1.37
CAST-242ENST00000515063 AFF1P51825 1210 aaKnown RBP6.49□□□□□ -1.37
CAST-242ENST00000515063 MLLT1Q03111 559 aaPredicted RBP6.49□□□□□ -1.37
CAST-242ENST00000515063 COL9A3Q14050 684 aaPredicted RBP6.49□□□□□ -1.37
CAST-242ENST00000515063 PERM1Q5SV97 790 aa6.49□□□□□ -1.37
CAST-242ENST00000515063 C8orf86Q6ZUL3 223 aa6.49□□□□□ -1.37
CAST-242ENST00000515063 CACTIN-AS1Q8N1I8 211 aa6.49□□□□□ -1.37
CAST-242ENST00000515063 DTWD1Q8N5C7 304 aa6.49□□□□□ -1.37
CAST-242ENST00000515063 OR13H1Q8NG92 308 aa6.49□□□□□ -1.37
CAST-242ENST00000515063 DCAF11Q8TEB1 546 aa6.49□□□□□ -1.37
CAST-242ENST00000515063 NUDT16Q96DE0 195 aaKnown RBP6.49□□□□□ -1.37
CAST-242ENST00000515063 LPIN3Q9BQK8 851 aa6.49□□□□□ -1.37
CAST-242ENST00000515063 ABI2Q9NYB9 513 aaPredicted RBP6.49□□□□□ -1.37
CAST-242ENST00000515063 ZBTB39O15060 712 aa6.48□□□□□ -1.37
CAST-242ENST00000515063 ELNP15502 786 aa6.48□□□□□ -1.37
CAST-242ENST00000515063 MZF1P28698 734 aaPredicted RBP6.48□□□□□ -1.37
CAST-242ENST00000515063 USP5P45974 858 aa6.48□□□□□ -1.37
CAST-242ENST00000515063 EIF1AXP47813 144 aaKnown RBP6.48□□□□□ -1.37
CAST-242ENST00000515063 HYAL2Q12891 473 aa6.48□□□□□ -1.37
CAST-242ENST00000515063 AAMPQ13685 434 aa6.48□□□□□ -1.37
CAST-242ENST00000515063 FAM26DQ5JW98 314 aa6.48□□□□□ -1.37
CAST-242ENST00000515063 ZNF438Q7Z4V0 828 aa6.48□□□□□ -1.37
CAST-242ENST00000515063 WFDC8Q8IUA0 241 aa6.48□□□□□ -1.37
CAST-242ENST00000515063 NSUN5Q96P11 429 aaKnown RBP6.48□□□□□ -1.37
CAST-242ENST00000515063 SMG9Q9H0W8 520 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms