RNA–Protein interactions for RNA: ENST00000515022.5

TRIM6-211, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-211ENST00000515022 EVX2Q03828 476 aa11.28□□□□□ -0.6
TRIM6-211ENST00000515022 CC2D1BQ5T0F9 858 aaKnown RBP11.28□□□□□ -0.6
TRIM6-211ENST00000515022 USP48Q86UV5 1035 aa11.28□□□□□ -0.6
TRIM6-211ENST00000515022 GAS2L2Q8NHY3 880 aa11.28□□□□□ -0.6
TRIM6-211ENST00000515022 RPGRQ92834 1020 aaKnown RBP11.28□□□□□ -0.6
TRIM6-211ENST00000515022 PHACTR3Q96KR7 559 aa11.28□□□□□ -0.6
TRIM6-211ENST00000515022 PHF12Q96QT6 1004 aa11.28□□□□□ -0.6
TRIM6-211ENST00000515022 NUP98P52948 1817 aa11.28□□□□□ -0.6
TRIM6-211ENST00000515022 NPC1L1Q9UHC9 1359 aa11.28□□□□□ -0.6
TRIM6-211ENST00000515022 PPEF1O14829 653 aaPredicted RBP11.27□□□□□ -0.61
TRIM6-211ENST00000515022 SNRPA1P09661 255 aaKnown RBP11.27□□□□□ -0.61
TRIM6-211ENST00000515022 PYGBP11216 843 aa11.27□□□□□ -0.61
TRIM6-211ENST00000515022 HUNKP57058 714 aa11.27□□□□□ -0.61
TRIM6-211ENST00000515022 CXCL9Q07325 125 aa11.27□□□□□ -0.61
TRIM6-211ENST00000515022 CRY2Q49AN0 593 aa11.27□□□□□ -0.61
TRIM6-211ENST00000515022 TRPA1O75762 1119 aa11.26□□□□□ -0.61
TRIM6-211ENST00000515022 RAD17O75943 681 aa11.26□□□□□ -0.61
TRIM6-211ENST00000515022 CHRM1P11229 460 aaPredicted RBP11.26□□□□□ -0.61
TRIM6-211ENST00000515022 EIF4G2P78344 907 aaKnown RBP eCLIP11.26□□□□□ -0.61
TRIM6-211ENST00000515022 CC2D2BQ6DHV5 1058 aa11.26□□□□□ -0.61
TRIM6-211ENST00000515022 MCM10Q7L590 875 aa11.26□□□□□ -0.61
TRIM6-211ENST00000515022 AKAP11Q9UKA4 1901 aa11.26□□□□□ -0.61
TRIM6-211ENST00000515022 CEMIPQ8WUJ3 1361 aa11.26□□□□□ -0.61
TRIM6-211ENST00000515022 HOXA10P31260 410 aaPredicted RBP11.25□□□□□ -0.61
TRIM6-211ENST00000515022 KIF23Q02241 960 aaPredicted RBP11.25□□□□□ -0.61
TRIM6-211ENST00000515022 NOGQ13253 232 aa11.25□□□□□ -0.61
TRIM6-211ENST00000515022 DCTN1Q14203 1278 aa11.25□□□□□ -0.61
TRIM6-211ENST00000515022 PRPF38BQ5VTL8 546 aaKnown RBP11.25□□□□□ -0.61
TRIM6-211ENST00000515022 TTLL7Q6ZT98 887 aa11.25□□□□□ -0.61
TRIM6-211ENST00000515022 RBM17Q96I25 401 aaKnown RBP11.25□□□□□ -0.61
TRIM6-211ENST00000515022 BCL2L13Q9BXK5 485 aa11.25□□□□□ -0.61
TRIM6-211ENST00000515022 MIS18AQ9NYP9 233 aa11.25□□□□□ -0.61
TRIM6-211ENST00000515022 COL3A1P02461 1466 aaPredicted RBP11.25□□□□□ -0.61
TRIM6-211ENST00000515022 FAM155AB1AL88 458 aaPredicted RBP11.24□□□□□ -0.61
TRIM6-211ENST00000515022 PRKAR2BP31323 418 aa11.24□□□□□ -0.61
TRIM6-211ENST00000515022 SUSD4Q5VX71 490 aa11.24□□□□□ -0.61
TRIM6-211ENST00000515022 HHIPL1Q96JK4 782 aa11.24□□□□□ -0.61
TRIM6-211ENST00000515022 NYXQ9GZU5 481 aa11.24□□□□□ -0.61
TRIM6-211ENST00000515022 PGAP2Q9UHJ9 254 aa11.24□□□□□ -0.61
TRIM6-211ENST00000515022 ZNRF3Q9ULT6 936 aa11.24□□□□□ -0.61
TRIM6-211ENST00000515022 UBN2Q6ZU65 1347 aa11.24□□□□□ -0.61
TRIM6-211ENST00000515022 TAF1P21675 1872 aa11.23□□□□□ -0.61
TRIM6-211ENST00000515022 CLCN6P51797 869 aa11.23□□□□□ -0.61
TRIM6-211ENST00000515022 CDC37L1Q7L3B6 337 aa11.23□□□□□ -0.61
TRIM6-211ENST00000515022 KIF12Q96FN5 646 aa11.23□□□□□ -0.61
TRIM6-211ENST00000515022 CRAMP1Q96RY5 1269 aa11.23□□□□□ -0.61
TRIM6-211ENST00000515022 ZBTB3Q9H5J0 574 aa11.23□□□□□ -0.61
TRIM6-211ENST00000515022 RNF186Q9NXI6 227 aa11.23□□□□□ -0.61
TRIM6-211ENST00000515022 CNOT7Q9UIV1 285 aaKnown RBP11.23□□□□□ -0.61
TRIM6-211ENST00000515022 RRP7AQ9Y3A4 280 aaKnown RBP11.23□□□□□ -0.61
TRIM6-211ENST00000515022 ADM5C9JUS6 153 aa11.22□□□□□ -0.61
TRIM6-211ENST00000515022 RGMBQ6NW40 437 aa11.22□□□□□ -0.61
TRIM6-211ENST00000515022 SAMD7Q7Z3H4 446 aa11.22□□□□□ -0.61
TRIM6-211ENST00000515022 RIC1Q4ADV7 1423 aa11.21□□□□□ -0.61
TRIM6-211ENST00000515022 YDJCA8MPS7 323 aa11.21□□□□□ -0.61
TRIM6-211ENST00000515022 EGFRP00533 1210 aa11.21□□□□□ -0.61
TRIM6-211ENST00000515022 MYL6BP14649 208 aa11.21□□□□□ -0.61
TRIM6-211ENST00000515022 ZNF157P51786 506 aaPredicted RBP11.21□□□□□ -0.61
TRIM6-211ENST00000515022 TBC1D10BQ4KMP7 808 aaPredicted RBP11.21□□□□□ -0.61
TRIM6-211ENST00000515022 RBM26Q5T8P6 1007 aaKnown RBP11.21□□□□□ -0.61
TRIM6-211ENST00000515022 MICALL2Q8IY33 904 aa11.21□□□□□ -0.61
TRIM6-211ENST00000515022 ATP6V0A2Q9Y487 856 aa11.21□□□□□ -0.61
TRIM6-211ENST00000515022 ABCC4O15439 1325 aa11.2□□□□□ -0.62
TRIM6-211ENST00000515022 KIF7Q2M1P5 1343 aa11.2□□□□□ -0.62
TRIM6-211ENST00000515022 MAP3K15Q6ZN16 1313 aa11.2□□□□□ -0.62
TRIM6-211ENST00000515022 NTSR2O95665 410 aa11.2□□□□□ -0.62
TRIM6-211ENST00000515022 DPP8Q6V1X1 898 aaPredicted RBP11.2□□□□□ -0.62
TRIM6-211ENST00000515022 KRT26Q7Z3Y9 468 aa11.2□□□□□ -0.62
TRIM6-211ENST00000515022 CTU1Q7Z7A3 348 aaKnown RBP11.2□□□□□ -0.62
TRIM6-211ENST00000515022 ZC3H15Q8WU90 426 aaKnown RBP11.2□□□□□ -0.62
TRIM6-211ENST00000515022 ZNF428Q96B54 188 aa11.2□□□□□ -0.62
TRIM6-211ENST00000515022 CSRNP1Q96S65 589 aa11.2□□□□□ -0.62
TRIM6-211ENST00000515022 RSPH6AQ9H0K4 717 aa11.2□□□□□ -0.62
TRIM6-211ENST00000515022 GBA2Q9HCG7 927 aaPredicted RBP11.2□□□□□ -0.62
TRIM6-211ENST00000515022 HPS5Q9UPZ3 1129 aa11.2□□□□□ -0.62
TRIM6-211ENST00000515022 PCDHB13Q9Y5F0 798 aa11.2□□□□□ -0.62
TRIM6-211ENST00000515022 H7C1D1 291 aa11.19□□□□□ -0.62
TRIM6-211ENST00000515022 RGL2O15211 777 aa11.19□□□□□ -0.62
TRIM6-211ENST00000515022 MAP3K13O43283 966 aa11.19□□□□□ -0.62
TRIM6-211ENST00000515022 TNIP1Q15025 636 aa11.19□□□□□ -0.62
TRIM6-211ENST00000515022 GRIPAP1Q4V328 841 aa11.19□□□□□ -0.62
TRIM6-211ENST00000515022 KIF6Q6ZMV9 814 aa11.19□□□□□ -0.62
TRIM6-211ENST00000515022 RTF1Q92541 710 aaKnown RBP11.19□□□□□ -0.62
TRIM6-211ENST00000515022 TMX4Q9H1E5 349 aaPredicted RBP11.19□□□□□ -0.62
TRIM6-211ENST00000515022 SAGE1Q9NXZ1 904 aa11.19□□□□□ -0.62
TRIM6-211ENST00000515022 MKI67P46013 3256 aaKnown RBP11.19□□□□□ -0.62
TRIM6-211ENST00000515022 LAMB4A4D0S4 1761 aa11.18□□□□□ -0.62
TRIM6-211ENST00000515022 LAMB2P55268 1798 aa11.18□□□□□ -0.62
TRIM6-211ENST00000515022 ASTN2O75129 1339 aaPredicted RBP11.18□□□□□ -0.62
TRIM6-211ENST00000515022 ERVV-1B6SEH8 477 aa11.18□□□□□ -0.62
TRIM6-211ENST00000515022 KIAA2012Q0VF49 1180 aa11.18□□□□□ -0.62
TRIM6-211ENST00000515022 ZNF467Q7Z7K2 595 aaPredicted RBP11.18□□□□□ -0.62
TRIM6-211ENST00000515022 ZNF34Q8IZ26 560 aa11.18□□□□□ -0.62
TRIM6-211ENST00000515022 MPNDQ8N594 471 aa11.18□□□□□ -0.62
TRIM6-211ENST00000515022 C2orf69Q8N8R5 385 aa11.18□□□□□ -0.62
TRIM6-211ENST00000515022 RTFDC1Q9BY42 306 aaPredicted RBP11.18□□□□□ -0.62
TRIM6-211ENST00000515022 KCNQ5Q9NR82 932 aa11.18□□□□□ -0.62
TRIM6-211ENST00000515022 PSMD14O00487 310 aa11.17□□□□□ -0.62
TRIM6-211ENST00000515022 PER1O15534 1290 aaPredicted RBP11.17□□□□□ -0.62
TRIM6-211ENST00000515022 HCLS1P14317 486 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms