RNA–Protein interactions for RNA: ENST00000514561.5

SEC24D-214, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 3,806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-214ENST00000514561 CYP46A1Q9Y6A2 500 aa5.61□□□□□ -1.51
SEC24D-214ENST00000514561 SETD1BQ9UPS6 1966 aaKnown RBP5.61□□□□□ -1.51
SEC24D-214ENST00000514561 GLRX3O76003 335 aaKnown RBP5.61□□□□□ -1.51
SEC24D-214ENST00000514561 TRDNQ13061 729 aa5.61□□□□□ -1.51
SEC24D-214ENST00000514561 RRP12Q5JTH9 1297 aaKnown RBP5.61□□□□□ -1.51
SEC24D-214ENST00000514561 NFXL1Q6ZNB6 911 aa5.61□□□□□ -1.51
SEC24D-214ENST00000514561 DDX11Q96FC9 970 aa5.61□□□□□ -1.51
SEC24D-214ENST00000514561 BCL2L12Q9HB09 334 aa5.61□□□□□ -1.51
SEC24D-214ENST00000514561 TMOD3Q9NYL9 352 aa5.61□□□□□ -1.51
SEC24D-214ENST00000514561 CICQ96RK0 1608 aaPredicted RBP5.61□□□□□ -1.51
SEC24D-214ENST00000514561 PPFIA4O75335 1185 aa5.61□□□□□ -1.51
SEC24D-214ENST00000514561 NBPF7P0C2Y1 421 aaPredicted RBP5.61□□□□□ -1.51
SEC24D-214ENST00000514561 ATP2B1P20020 1258 aa5.61□□□□□ -1.51
SEC24D-214ENST00000514561 PRIM1P49642 420 aaKnown RBP5.61□□□□□ -1.51
SEC24D-214ENST00000514561 GABPB1Q06547 395 aaPredicted RBP5.61□□□□□ -1.51
SEC24D-214ENST00000514561 PDE4DQ08499 809 aa5.61□□□□□ -1.51
SEC24D-214ENST00000514561 IL17REQ8NFR9 667 aa5.61□□□□□ -1.51
SEC24D-214ENST00000514561 IP6K1Q92551 441 aa5.61□□□□□ -1.51
SEC24D-214ENST00000514561 TSC1Q92574 1164 aa5.61□□□□□ -1.51
SEC24D-214ENST00000514561 SLC39A13Q96H72 371 aa5.61□□□□□ -1.51
SEC24D-214ENST00000514561 FMNL2Q96PY5 1086 aa5.61□□□□□ -1.51
SEC24D-214ENST00000514561 C19orf44Q9H6X5 657 aa5.61□□□□□ -1.51
SEC24D-214ENST00000514561 CEP126Q9P2H0 1117 aa5.61□□□□□ -1.51
SEC24D-214ENST00000514561 FMN2Q9NZ56 1722 aa5.61□□□□□ -1.51
SEC24D-214ENST00000514561 MAP3K5Q99683 1374 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 RAD50Q92878 1312 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 RBM47A0AV96 593 aaKnown RBP5.6□□□□□ -1.51
SEC24D-214ENST00000514561 VGLL3A8MV65 326 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 HTATSF1O43719 755 aaKnown RBP5.6□□□□□ -1.51
SEC24D-214ENST00000514561 PHF14O94880 888 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 SYCP1Q15431 976 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 AKAP4Q5JQC9 854 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 ANKRD13DQ6ZTN6 518 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 TMTC2Q8N394 836 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 SECISBP2LQ93073 1101 aaKnown RBP5.6□□□□□ -1.51
SEC24D-214ENST00000514561 HYPKQ9NX55 129 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 CCDC39Q9UFE4 941 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 ZDHHC9Q9Y397 364 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.6□□□□□ -1.51
SEC24D-214ENST00000514561 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.6□□□□□ -1.511e-6■■■■□ 21.6
SEC24D-214ENST00000514561 IDH1O75874 414 aaKnown RBP5.6□□□□□ -1.51
SEC24D-214ENST00000514561 CBX1P83916 185 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 TTC39AQ5SRH9 613 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 MEX3CQ5U5Q3 659 aaKnown RBP5.6□□□□□ -1.51
SEC24D-214ENST00000514561 BLOC1S2Q6QNY1 142 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 KIF3AQ9Y496 699 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 SBNO1A3KN83 1393 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 RAB11FIP3O75154 756 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 PSMA5P28066 241 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 LDLRAD1Q5T700 205 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 LRSAM1Q6UWE0 723 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 DDX46Q7L014 1031 aaKnown RBP5.6□□□□□ -1.51
SEC24D-214ENST00000514561 PDRG1Q9NUG6 133 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 NDUFB9Q9Y6M9 179 aa5.6□□□□□ -1.51
SEC24D-214ENST00000514561 CPA1P15085 419 aa5.59□□□□□ -1.51
SEC24D-214ENST00000514561 CCDC158Q5M9N0 1113 aa5.59□□□□□ -1.51
SEC24D-214ENST00000514561 LARP1BQ659C4 914 aaKnown RBP5.59□□□□□ -1.51
SEC24D-214ENST00000514561 ZGPATQ8N5A5 531 aaKnown RBP5.59□□□□□ -1.51
SEC24D-214ENST00000514561 ZNF526Q8TF50 670 aaPredicted RBP5.59□□□□□ -1.51
SEC24D-214ENST00000514561 FEZ1Q99689 392 aa5.59□□□□□ -1.51
SEC24D-214ENST00000514561 ECHDC1Q9NTX5 307 aa5.59□□□□□ -1.51
SEC24D-214ENST00000514561 CTNNA3Q9UI47 895 aa5.59□□□□□ -1.51
SEC24D-214ENST00000514561 ADAMTS7Q9UKP4 1686 aa5.59□□□□□ -1.51
SEC24D-214ENST00000514561 SYCE3A1L190 88 aa5.59□□□□□ -1.51
SEC24D-214ENST00000514561 GRM8O00222 908 aa5.59□□□□□ -1.51
SEC24D-214ENST00000514561 GOLIM4O00461 696 aa5.59□□□□□ -1.51
SEC24D-214ENST00000514561 PSEN1P49768 467 aa5.59□□□□□ -1.51
SEC24D-214ENST00000514561 ATP8B2P98198 1209 aa5.59□□□□□ -1.51
SEC24D-214ENST00000514561 LRRFIP1Q32MZ4 808 aaKnown RBP5.59□□□□□ -1.51
SEC24D-214ENST00000514561 RAB11FIP4Q86YS3 637 aa5.59□□□□□ -1.51
SEC24D-214ENST00000514561 RASSF8Q8NHQ8 419 aa5.59□□□□□ -1.51
SEC24D-214ENST00000514561 ACSBG1Q96GR2 724 aa5.59□□□□□ -1.51
SEC24D-214ENST00000514561 LRRC2Q9BYS8 371 aa5.59□□□□□ -1.51
SEC24D-214ENST00000514561 PPME1Q9Y570 386 aa5.59□□□□□ -1.51
SEC24D-214ENST00000514561 MORC2Q9Y6X9 1032 aaPredicted RBP5.59□□□□□ -1.51
SEC24D-214ENST00000514561 NPHP3Q7Z494 1330 aa5.59□□□□□ -1.51
SEC24D-214ENST00000514561 BECN2A8MW95 431 aa5.59□□□□□ -1.52
SEC24D-214ENST00000514561 G3V3G9 751 aa5.59□□□□□ -1.52
SEC24D-214ENST00000514561 RNMTO43148 476 aaKnown RBP5.59□□□□□ -1.52
SEC24D-214ENST00000514561 SNRPA1P09661 255 aaKnown RBP5.59□□□□□ -1.52
SEC24D-214ENST00000514561 MCM2P49736 904 aa5.59□□□□□ -1.52
SEC24D-214ENST00000514561 METTL24Q5JXM2 366 aa5.59□□□□□ -1.52
SEC24D-214ENST00000514561 DCAF8Q5TAQ9 597 aa5.59□□□□□ -1.52
SEC24D-214ENST00000514561 LMBR1LQ6UX01 489 aa5.59□□□□□ -1.52
SEC24D-214ENST00000514561 MPHOSPH8Q99549 860 aa5.59□□□□□ -1.52
SEC24D-214ENST00000514561 TMEM63CQ9P1W3 806 aa5.59□□□□□ -1.52
SEC24D-214ENST00000514561 PRAMEF22A3QJZ6 481 aa5.58□□□□□ -1.52
SEC24D-214ENST00000514561 GRIPAP1Q4V328 841 aa5.58□□□□□ -1.52
SEC24D-214ENST00000514561 KSR2Q6VAB6 950 aa5.58□□□□□ -1.52
SEC24D-214ENST00000514561 RBM27Q9P2N5 1060 aaKnown RBP5.58□□□□□ -1.52
SEC24D-214ENST00000514561 RGPD1P0DJD0 1748 aa5.58□□□□□ -1.52
SEC24D-214ENST00000514561 KIF1AQ12756 1690 aa5.58□□□□□ -1.52
SEC24D-214ENST00000514561 XIRP1Q702N8 1843 aaKnown RBP5.58□□□□□ -1.52
SEC24D-214ENST00000514561 TCHHQ07283 1943 aa5.58□□□□□ -1.52
SEC24D-214ENST00000514561 HAND2P61296 217 aa5.58□□□□□ -1.52
SEC24D-214ENST00000514561 GUCY1B3Q02153 619 aa5.58□□□□□ -1.52
SEC24D-214ENST00000514561 CPLX2Q6PUV4 134 aaKnown RBP5.58□□□□□ -1.52
SEC24D-214ENST00000514561 SYNE3Q6ZMZ3 975 aa5.58□□□□□ -1.52
SEC24D-214ENST00000514561 NECAB1Q8N987 351 aa5.58□□□□□ -1.52
SEC24D-214ENST00000514561 ZCRB1Q8TBF4 217 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 1616.8 ms