RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 BOLA2Q9H3K6 86 aa18.13■□□□□ 0.49
VCAN-211ENST00000513984 CHMP5Q9NZZ3 219 aa18.13■□□□□ 0.49
VCAN-211ENST00000513984 UBN2Q6ZU65 1347 aa18.12■□□□□ 0.49
VCAN-211ENST00000513984 ST18O60284 1047 aa18.12■□□□□ 0.49
VCAN-211ENST00000513984 LRRC24Q50LG9 513 aa18.12■□□□□ 0.49
VCAN-211ENST00000513984 ZNF594Q96JF6 807 aaPredicted RBP18.12■□□□□ 0.49
VCAN-211ENST00000513984 DBNDD2Q9BQY9 259 aa18.12■□□□□ 0.49
VCAN-211ENST00000513984 LY75O60449 1722 aa18.12■□□□□ 0.49
VCAN-211ENST00000513984 RFX7Q2KHR2 1363 aa18.12■□□□□ 0.49
VCAN-211ENST00000513984 LRP5O75197 1615 aa18.12■□□□□ 0.49
VCAN-211ENST00000513984 HSPA4P34932 840 aa18.12■□□□□ 0.49
VCAN-211ENST00000513984 PALD1Q9ULE6 856 aa18.12■□□□□ 0.49
VCAN-211ENST00000513984 SCN7AQ01118 1682 aa18.11■□□□□ 0.49
VCAN-211ENST00000513984 TAF1LQ8IZX4 1826 aa18.11■□□□□ 0.49
VCAN-211ENST00000513984 CAMTA2O94983 1202 aa18.11■□□□□ 0.49
VCAN-211ENST00000513984 SNRKQ9NRH2 765 aa18.11■□□□□ 0.49
VCAN-211ENST00000513984 CTSWP56202 376 aa18.1■□□□□ 0.49
VCAN-211ENST00000513984 IFIT5Q13325 482 aaKnown RBP18.1■□□□□ 0.49
VCAN-211ENST00000513984 SYNE4Q8N205 404 aa18.1■□□□□ 0.49
VCAN-211ENST00000513984 IL27Q8NEV9 243 aa18.1■□□□□ 0.49
VCAN-211ENST00000513984 TTLL11Q8NHH1 800 aa18.1■□□□□ 0.49
VCAN-211ENST00000513984 TRMT112Q9UI30 125 aaKnown RBP18.1■□□□□ 0.49
VCAN-211ENST00000513984 CASZ1Q86V15 1759 aa18.1■□□□□ 0.49
VCAN-211ENST00000513984 IRS4O14654 1257 aaPredicted RBP18.09■□□□□ 0.49
VCAN-211ENST00000513984 HSPA1LP34931 641 aa18.09■□□□□ 0.49
VCAN-211ENST00000513984 PUS3Q9BZE2 481 aaKnown RBP18.09■□□□□ 0.49
VCAN-211ENST00000513984 CIZ1Q9ULV3 898 aaPredicted RBP18.09■□□□□ 0.49
VCAN-211ENST00000513984 ATRNO75882 1429 aa18.09■□□□□ 0.49
VCAN-211ENST00000513984 PDE8AO60658 829 aa18.09■□□□□ 0.49
VCAN-211ENST00000513984 MYT1Q01538 1121 aa18.09■□□□□ 0.49
VCAN-211ENST00000513984 KIAA1211Q6ZU35 1233 aa18.09■□□□□ 0.49
VCAN-211ENST00000513984 AK7Q96M32 723 aa18.09■□□□□ 0.49
VCAN-211ENST00000513984 HAUS7Q99871 368 aa18.09■□□□□ 0.49
VCAN-211ENST00000513984 FSD1Q9BTV5 496 aa18.09■□□□□ 0.49
VCAN-211ENST00000513984 MEX3CQ5U5Q3 659 aaKnown RBP18.08■□□□□ 0.48
VCAN-211ENST00000513984 GJD4Q96KN9 370 aaPredicted RBP18.08■□□□□ 0.48
VCAN-211ENST00000513984 CEP126Q9P2H0 1117 aa18.08■□□□□ 0.48
VCAN-211ENST00000513984 RIC1Q4ADV7 1423 aa18.08■□□□□ 0.48
VCAN-211ENST00000513984 FRAT2O75474 233 aaPredicted RBP18.07■□□□□ 0.48
VCAN-211ENST00000513984 NMIQ13287 307 aaPredicted RBP18.07■□□□□ 0.48
VCAN-211ENST00000513984 PARP10Q53GL7 1025 aa18.07■□□□□ 0.48
VCAN-211ENST00000513984 LINC00116Q8NCU8 138 aa18.07■□□□□ 0.48
VCAN-211ENST00000513984 AFF2P51816 1311 aa18.07■□□□□ 0.48
VCAN-211ENST00000513984 CNTNAP4Q9C0A0 1308 aa18.07■□□□□ 0.48
VCAN-211ENST00000513984 ARAP2Q8WZ64 1704 aa18.07■□□□□ 0.48
VCAN-211ENST00000513984 MED23Q9ULK4 1368 aa18.07■□□□□ 0.48
VCAN-211ENST00000513984 A0A1B0GUL7 405 aa18.07■□□□□ 0.48
VCAN-211ENST00000513984 ITGA6P23229 1130 aa18.07■□□□□ 0.48
VCAN-211ENST00000513984 TAF7LQ5H9L4 462 aa18.07■□□□□ 0.48
VCAN-211ENST00000513984 GREM2Q9H772 168 aa18.07■□□□□ 0.48
VCAN-211ENST00000513984 MYH7P12883 1935 aa18.06■□□□□ 0.48
VCAN-211ENST00000513984 HSP90AA1P07900 732 aaKnown RBP18.06■□□□□ 0.48
VCAN-211ENST00000513984 NEK4P51957 841 aa18.06■□□□□ 0.48
VCAN-211ENST00000513984 TIMM10P62072 90 aa18.06■□□□□ 0.48
VCAN-211ENST00000513984 FAM227BQ96M60 508 aa18.06■□□□□ 0.48
VCAN-211ENST00000513984 NEUROD6Q96NK8 337 aa18.06■□□□□ 0.48
VCAN-211ENST00000513984 AKAP2Q9Y2D5 859 aa18.06■□□□□ 0.48
VCAN-211ENST00000513984 CCDC171Q6TFL3 1326 aa18.06■□□□□ 0.48
VCAN-211ENST00000513984 SH3TC1Q8TE82 1336 aa18.06■□□□□ 0.48
VCAN-211ENST00000513984 ANKRD18BA2A2Z9 1011 aa18.05■□□□□ 0.48
VCAN-211ENST00000513984 MCM2P49736 904 aa18.05■□□□□ 0.48
VCAN-211ENST00000513984 SUSD4Q5VX71 490 aa18.05■□□□□ 0.48
VCAN-211ENST00000513984 TICAM2Q86XR7 235 aa18.05■□□□□ 0.48
VCAN-211ENST00000513984 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.05■□□□□ 0.48
VCAN-211ENST00000513984 EDC3Q96F86 508 aaKnown RBP18.05■□□□□ 0.48
VCAN-211ENST00000513984 CCDC85AQ96PX6 553 aaPredicted RBP18.05■□□□□ 0.48
VCAN-211ENST00000513984 AKAP11Q9UKA4 1901 aa18.05■□□□□ 0.48
VCAN-211ENST00000513984 A0A0D9SFI3 127 aa18.05■□□□□ 0.48
VCAN-211ENST00000513984 ONECUT3O60422 494 aaPredicted RBP18.05■□□□□ 0.48
VCAN-211ENST00000513984 PTH1RQ03431 593 aa18.05■□□□□ 0.48
VCAN-211ENST00000513984 PTF1AQ7RTS3 328 aa18.05■□□□□ 0.48
VCAN-211ENST00000513984 RIPOR2Q9Y4F9 1068 aa18.05■□□□□ 0.48
VCAN-211ENST00000513984 SNX14Q9Y5W7 946 aa18.05■□□□□ 0.48
VCAN-211ENST00000513984 RGL2O15211 777 aa18.04■□□□□ 0.48
VCAN-211ENST00000513984 KCNB2Q92953 911 aa18.04■□□□□ 0.48
VCAN-211ENST00000513984 DNAJC2Q99543 621 aaKnown RBP18.04■□□□□ 0.48
VCAN-211ENST00000513984 UTP14AQ9BVJ6 771 aaKnown RBP18.04■□□□□ 0.48
VCAN-211ENST00000513984 ZNF652Q9Y2D9 606 aa18.04■□□□□ 0.48
VCAN-211ENST00000513984 COL24A1Q17RW2 1714 aa18.03■□□□□ 0.48
VCAN-211ENST00000513984 RC3H1Q5TC82 1133 aaKnown RBP18.03■□□□□ 0.48
VCAN-211ENST00000513984 CLEC4GQ6UXB4 293 aa18.03■□□□□ 0.48
VCAN-211ENST00000513984 ABCC12Q96J65 1359 aa18.03■□□□□ 0.48
VCAN-211ENST00000513984 LDHAL6AQ6ZMR3 332 aa18.02■□□□□ 0.48
VCAN-211ENST00000513984 KBTBD3Q8NAB2 608 aa18.02■□□□□ 0.48
VCAN-211ENST00000513984 TRPC5Q9UL62 973 aaPredicted RBP18.02■□□□□ 0.48
VCAN-211ENST00000513984 NTSR2O95665 410 aa18.02■□□□□ 0.47
VCAN-211ENST00000513984 MAP4K1Q92918 833 aa18.02■□□□□ 0.47
VCAN-211ENST00000513984 NIP7Q9Y221 180 aaKnown RBP eCLIP18.02■□□□□ 0.47
VCAN-211ENST00000513984 NDUFB9Q9Y6M9 179 aa18.02■□□□□ 0.47
VCAN-211ENST00000513984 HSP90B1P14625 803 aaKnown RBP18.01■□□□□ 0.47
VCAN-211ENST00000513984 NECTIN1Q15223 517 aa18.01■□□□□ 0.47
VCAN-211ENST00000513984 RASEFQ8IZ41 740 aa18.01■□□□□ 0.47
VCAN-211ENST00000513984 PAG1Q9NWQ8 432 aa18.01■□□□□ 0.47
VCAN-211ENST00000513984 RTL9Q8NET4 1388 aa18.01■□□□□ 0.47
VCAN-211ENST00000513984 C4AP0C0L4 1744 aa18.01■□□□□ 0.47
VCAN-211ENST00000513984 C4BP0C0L5 1744 aa18.01■□□□□ 0.47
VCAN-211ENST00000513984 A0A1B0GUL6 1792 aa18.01■□□□□ 0.47
VCAN-211ENST00000513984 BRWD3Q6RI45 1802 aa18.01■□□□□ 0.47
VCAN-211ENST00000513984 IFIT1P09914 478 aaKnown RBP18■□□□□ 0.47
VCAN-211ENST00000513984 RAB3GAP1Q15042 981 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms