RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 DCAF8Q5TAQ9 597 aa8.96□□□□□ -0.98
CLCN3-209ENST00000513761 ABCC10Q5T3U5 1492 aa8.96□□□□□ -0.98
CLCN3-209ENST00000513761 GOLGA8AA7E2F4 631 aa8.96□□□□□ -0.98
CLCN3-209ENST00000513761 DNA2P51530 1060 aa8.96□□□□□ -0.98
CLCN3-209ENST00000513761 PYCARDQ9ULZ3 195 aa8.96□□□□□ -0.98
CLCN3-209ENST00000513761 TTC41PQ6P2S7 1318 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 CEP131Q9UPN4 1083 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 RAD50Q92878 1312 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 ODF2Q5BJF6 829 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 PTPDC1A2A3K4 754 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 GOLGA6L9A6NEM1 432 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 HSPA4P34932 840 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 KARSQ15046 597 aaKnown RBP8.95□□□□□ -0.98
CLCN3-209ENST00000513761 KCNG4Q8TDN1 519 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 SMARCC1Q92922 1105 aaPredicted RBP8.95□□□□□ -0.98
CLCN3-209ENST00000513761 ERO1AQ96HE7 468 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 FAM227BQ96M60 508 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 PLEKHF1Q96S99 279 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 ZFYVE9O95405 1425 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 MAST1Q9Y2H9 1570 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 IQCEQ6IPM2 695 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 SLC12A7Q9Y666 1083 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 GRM8O00222 908 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 UTP14AQ9BVJ6 771 aaKnown RBP8.95□□□□□ -0.98
CLCN3-209ENST00000513761 CHL1O00533 1208 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 IFIT3O14879 490 aaKnown RBP8.95□□□□□ -0.98
CLCN3-209ENST00000513761 MAP9Q49MG5 647 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 MCMDC2Q4G0Z9 681 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 LEO1Q8WVC0 666 aaPredicted RBP8.95□□□□□ -0.98
CLCN3-209ENST00000513761 CLSTN2Q9H4D0 955 aa8.95□□□□□ -0.98
CLCN3-209ENST00000513761 KIF21AQ7Z4S6 1674 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 MINDY4BA8MYZ0 360 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 IARSP41252 1262 aaKnown RBP8.94□□□□□ -0.98
CLCN3-209ENST00000513761 NAPBQ9H115 298 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 ADGBQ8N7X0 1667 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 SHTN1A0MZ66 631 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 SPTLC2O15270 562 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 PHACTR2O75167 634 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 ATF3P18847 181 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 METAP2P50579 478 aaKnown RBP eCLIP8.94□□□□□ -0.98
CLCN3-209ENST00000513761 SIRT2Q8IXJ6 389 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 RSPH14Q9UHP6 348 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 SSRP1Q08945 709 aaKnown RBP8.94□□□□□ -0.98
CLCN3-209ENST00000513761 CCDC191Q8NCU4 936 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 AMOTL2Q9Y2J4 779 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 SLC27A2O14975 620 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.94□□□□□ -0.98
CLCN3-209ENST00000513761 GPATCH11Q8N954 259 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 MPHOSPH8Q99549 860 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 SLC26A6Q9BXS9 759 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 STRN4Q9NRL3 753 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 LRP2BPQ9P2M1 347 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 PUF60Q9UHX1 559 aaKnown RBP8.94□□□□□ -0.98
CLCN3-209ENST00000513761 USP8P40818 1118 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 ZHX3Q9H4I2 956 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 ABCC1P33527 1531 aa8.94□□□□□ -0.98
CLCN3-209ENST00000513761 AMOTQ4VCS5 1084 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 CTR9Q6PD62 1173 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 CCDC129Q6ZRS4 1044 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 C10orf67Q8IYJ2 551 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 VGLL3A8MV65 326 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 CAPN2P17655 700 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 EYA1Q99502 592 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 ALG1Q9BT22 464 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 ZBTB3Q9H5J0 574 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 LZTFL1Q9NQ48 299 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 ABCF2Q9UG63 623 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 JAK2O60674 1132 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 RPS6KB1P23443 525 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 NPATQ14207 1427 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 ME3Q16798 604 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 PLCD3Q8N3E9 789 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 AKAP2Q9Y2D5 859 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 AFMP43652 599 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 NCOA7Q8NI08 942 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 EVCP57679 992 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 TMEM67Q5HYA8 995 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 VPS18Q9P253 973 aa8.93□□□□□ -0.98
CLCN3-209ENST00000513761 KDM5AP29375 1690 aaKnown RBP8.92□□□□□ -0.98
CLCN3-209ENST00000513761 POTEB2H3BUK9 544 aa8.92□□□□□ -0.98
CLCN3-209ENST00000513761 MATR3P43243 847 aaKnown RBP eCLIP8.92□□□□□ -0.983e-6■■■■□ 21.7
CLCN3-209ENST00000513761 SPA17Q15506 151 aa8.92□□□□□ -0.98
CLCN3-209ENST00000513761 YEATS4O95619 227 aa8.92□□□□□ -0.98
CLCN3-209ENST00000513761 NBPF7P0C2Y1 421 aaPredicted RBP8.92□□□□□ -0.98
CLCN3-209ENST00000513761 SLC39A6Q13433 755 aa8.92□□□□□ -0.98
CLCN3-209ENST00000513761 KSR2Q6VAB6 950 aa8.92□□□□□ -0.98
CLCN3-209ENST00000513761 NCOA5Q9HCD5 579 aaKnown RBP8.92□□□□□ -0.98
CLCN3-209ENST00000513761 IBTKQ9P2D0 1353 aaPredicted RBP8.92□□□□□ -0.98
CLCN3-209ENST00000513761 SSBP05455 408 aaKnown RBP eCLIP8.92□□□□□ -0.98
CLCN3-209ENST00000513761 FAM160A1Q05DH4 1040 aa8.92□□□□□ -0.98
CLCN3-209ENST00000513761 GABPB1Q06547 395 aaPredicted RBP8.92□□□□□ -0.98
CLCN3-209ENST00000513761 SAMD1Q6SPF0 538 aaPredicted RBP8.92□□□□□ -0.98
CLCN3-209ENST00000513761 THEMISQ8N1K5 641 aaPredicted RBP8.92□□□□□ -0.98
CLCN3-209ENST00000513761 KCNH5Q8NCM2 988 aa8.92□□□□□ -0.98
CLCN3-209ENST00000513761 XAGE3Q8WTP9 111 aa8.92□□□□□ -0.98
CLCN3-209ENST00000513761 SRRTQ9BXP5 876 aaKnown RBP8.92□□□□□ -0.98
CLCN3-209ENST00000513761 NRBP1Q9UHY1 535 aa8.92□□□□□ -0.98
CLCN3-209ENST00000513761 KRT18P05783 430 aaKnown RBP8.92□□□□□ -0.98
CLCN3-209ENST00000513761 CT47A1Q5JQC4 288 aaPredicted RBP8.92□□□□□ -0.98
CLCN3-209ENST00000513761 TOM1L2Q6ZVM7 507 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms