RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 IRS1P35568 1242 aa11.37□□□□□ -0.59
TRAPPC11-210ENST00000513600 SF3B2Q13435 895 aaKnown RBP11.37□□□□□ -0.59
TRAPPC11-210ENST00000513600 GPR152Q8TDT2 470 aa11.37□□□□□ -0.59
TRAPPC11-210ENST00000513600 UBAP1LF5GYI3 381 aa11.36□□□□□ -0.59
TRAPPC11-210ENST00000513600 NPR3P17342 541 aa11.36□□□□□ -0.59
TRAPPC11-210ENST00000513600 ALKBH2Q6NS38 261 aa11.36□□□□□ -0.59
TRAPPC11-210ENST00000513600 LINC00114Q6XXX2 140 aa11.36□□□□□ -0.59
TRAPPC11-210ENST00000513600 DNAJB12Q9NXW2 375 aaKnown RBP11.36□□□□□ -0.59
TRAPPC11-210ENST00000513600 FAM13AO94988 1023 aa11.35□□□□□ -0.59
TRAPPC11-210ENST00000513600 ABL1P00519 1130 aa11.35□□□□□ -0.59
TRAPPC11-210ENST00000513600 MPSTP25325 297 aa11.35□□□□□ -0.59
TRAPPC11-210ENST00000513600 FKBP4Q02790 459 aaKnown RBP eCLIP11.35□□□□□ -0.59
TRAPPC11-210ENST00000513600 DHX32Q7L7V1 743 aaKnown RBP11.35□□□□□ -0.59
TRAPPC11-210ENST00000513600 NLRP13Q86W25 1043 aa11.35□□□□□ -0.59
TRAPPC11-210ENST00000513600 SLC6A14Q9UN76 642 aa11.35□□□□□ -0.59
TRAPPC11-210ENST00000513600 GNB5O14775 395 aa11.34□□□□□ -0.59
TRAPPC11-210ENST00000513600 RPLP1P05386 114 aaKnown RBP11.34□□□□□ -0.59
TRAPPC11-210ENST00000513600 EIF1AXP47813 144 aaKnown RBP11.34□□□□□ -0.59
TRAPPC11-210ENST00000513600 GSK3AP49840 483 aa11.34□□□□□ -0.59
TRAPPC11-210ENST00000513600 RASSF7Q02833 373 aa11.34□□□□□ -0.59
TRAPPC11-210ENST00000513600 MTMR3Q13615 1198 aa11.34□□□□□ -0.59
TRAPPC11-210ENST00000513600 TRIP4Q15650 581 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC11-210ENST00000513600 EGFL7Q9UHF1 273 aa11.34□□□□□ -0.59
TRAPPC11-210ENST00000513600 STARD13Q9Y3M8 1113 aa11.34□□□□□ -0.59
TRAPPC11-210ENST00000513600 ATCAYQ86WG3 371 aa11.33□□□□□ -0.6
TRAPPC11-210ENST00000513600 TRPM4Q8TD43 1214 aa11.33□□□□□ -0.6
TRAPPC11-210ENST00000513600 TLR7Q9NYK1 1049 aaKnown RBP11.33□□□□□ -0.6
TRAPPC11-210ENST00000513600 M0R082 166 aa11.32□□□□□ -0.6
TRAPPC11-210ENST00000513600 PCSK2P16519 638 aa11.32□□□□□ -0.6
TRAPPC11-210ENST00000513600 ZNF417Q8TAU3 575 aa11.32□□□□□ -0.6
TRAPPC11-210ENST00000513600 NUDT16Q96DE0 195 aaKnown RBP11.32□□□□□ -0.6
TRAPPC11-210ENST00000513600 ZNF587Q96SQ5 575 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC11-210ENST00000513600 PRDM6Q9NQX0 595 aa11.32□□□□□ -0.6
TRAPPC11-210ENST00000513600 PSAPP07602 524 aa11.31□□□□□ -0.6
TRAPPC11-210ENST00000513600 GPLD1P80108 840 aa11.31□□□□□ -0.6
TRAPPC11-210ENST00000513600 ZNF211Q13398 564 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC11-210ENST00000513600 MICALL1Q8N3F8 863 aa11.31□□□□□ -0.6
TRAPPC11-210ENST00000513600 TMEM151AQ8N4L1 468 aa11.31□□□□□ -0.6
TRAPPC11-210ENST00000513600 EDEM1Q92611 657 aa11.31□□□□□ -0.6
TRAPPC11-210ENST00000513600 GDF11O95390 407 aa11.3□□□□□ -0.6
TRAPPC11-210ENST00000513600 ALBP02768 609 aa11.3□□□□□ -0.6
TRAPPC11-210ENST00000513600 MZF1P28698 734 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC11-210ENST00000513600 NRLP54845 237 aa11.3□□□□□ -0.6
TRAPPC11-210ENST00000513600 C20orf204Q6ZNR8 217 aa11.3□□□□□ -0.6
TRAPPC11-210ENST00000513600 TXNDC2Q86VQ3 553 aa11.3□□□□□ -0.6
TRAPPC11-210ENST00000513600 ANO2Q9NQ90 1003 aa11.3□□□□□ -0.6
TRAPPC11-210ENST00000513600 ZBTB42B2RXF5 422 aa11.29□□□□□ -0.6
TRAPPC11-210ENST00000513600 ICMTO60725 284 aa11.29□□□□□ -0.6
TRAPPC11-210ENST00000513600 MMP20O60882 483 aa11.29□□□□□ -0.6
TRAPPC11-210ENST00000513600 BRD1O95696 1058 aa11.29□□□□□ -0.6
TRAPPC11-210ENST00000513600 SOX18P35713 384 aa11.29□□□□□ -0.6
TRAPPC11-210ENST00000513600 PLAURQ03405 335 aa11.29□□□□□ -0.6
TRAPPC11-210ENST00000513600 DNM1Q05193 864 aaKnown RBP11.29□□□□□ -0.6
TRAPPC11-210ENST00000513600 AAMPQ13685 434 aa11.29□□□□□ -0.6
TRAPPC11-210ENST00000513600 ALYREFQ86V81 257 aaKnown RBP11.29□□□□□ -0.6
TRAPPC11-210ENST00000513600 TTC16Q8NEE8 873 aa11.29□□□□□ -0.6
TRAPPC11-210ENST00000513600 CCER1Q8TC90 406 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC11-210ENST00000513600 NOP53Q9NZM5 478 aaKnown RBP11.29□□□□□ -0.6
TRAPPC11-210ENST00000513600 PDGFAP04085 211 aa11.28□□□□□ -0.6
TRAPPC11-210ENST00000513600 HOXD8P13378 290 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC11-210ENST00000513600 SERPINB4P48594 390 aa11.28□□□□□ -0.6
TRAPPC11-210ENST00000513600 TTC39BQ5VTQ0 682 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC11-210ENST00000513600 PDE12Q6L8Q7 609 aaKnown RBP11.28□□□□□ -0.6
TRAPPC11-210ENST00000513600 FAM35AQ86V20 835 aa11.28□□□□□ -0.6
TRAPPC11-210ENST00000513600 LILRB5O75023 590 aa11.27□□□□□ -0.61
TRAPPC11-210ENST00000513600 FRRS1LQ9P0K9 344 aa11.27□□□□□ -0.61
TRAPPC11-210ENST00000513600 NAGPAQ9UK23 515 aa11.27□□□□□ -0.61
TRAPPC11-210ENST00000513600 CPB1P15086 417 aa11.26□□□□□ -0.61
TRAPPC11-210ENST00000513600 PSAPL1Q6NUJ1 521 aa11.26□□□□□ -0.61
TRAPPC11-210ENST00000513600 POLIQ9UNA4 740 aa11.26□□□□□ -0.61
TRAPPC11-210ENST00000513600 SPDYE3A6NKU9 549 aa11.25□□□□□ -0.61
TRAPPC11-210ENST00000513600 H3BRB1 525 aa11.25□□□□□ -0.61
TRAPPC11-210ENST00000513600 RGS9O75916 674 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC11-210ENST00000513600 USP5P45974 858 aa11.25□□□□□ -0.61
TRAPPC11-210ENST00000513600 MLLT1Q03111 559 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC11-210ENST00000513600 XKR5Q6UX68 686 aa11.25□□□□□ -0.61
TRAPPC11-210ENST00000513600 ZNF438Q7Z4V0 828 aa11.25□□□□□ -0.61
TRAPPC11-210ENST00000513600 GLYCTKQ8IVS8 523 aa11.25□□□□□ -0.61
TRAPPC11-210ENST00000513600 OR13H1Q8NG92 308 aa11.25□□□□□ -0.61
TRAPPC11-210ENST00000513600 NUDT8Q8WV74 236 aa11.25□□□□□ -0.61
TRAPPC11-210ENST00000513600 PLVAPQ9BX97 442 aa11.25□□□□□ -0.61
TRAPPC11-210ENST00000513600 SUV39H2Q9H5I1 410 aa11.25□□□□□ -0.61
TRAPPC11-210ENST00000513600 TUT1Q9H6E5 874 aaKnown RBP11.25□□□□□ -0.61
TRAPPC11-210ENST00000513600 ELP3Q9H9T3 547 aa11.25□□□□□ -0.61
TRAPPC11-210ENST00000513600 JPH1Q9HDC5 661 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC11-210ENST00000513600 ABI2Q9NYB9 513 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC11-210ENST00000513600 LOC102724428A0A0B4J2F2 783 aa11.24□□□□□ -0.61
TRAPPC11-210ENST00000513600 SIK1P57059 783 aa11.24□□□□□ -0.61
TRAPPC11-210ENST00000513600 ELMSAN1Q6PJG2 1045 aa11.24□□□□□ -0.61
TRAPPC11-210ENST00000513600 C8orf86Q6ZUL3 223 aa11.24□□□□□ -0.61
TRAPPC11-210ENST00000513600 TRIM11Q96F44 468 aa11.24□□□□□ -0.61
TRAPPC11-210ENST00000513600 FZD6O60353 706 aa11.23□□□□□ -0.61
TRAPPC11-210ENST00000513600 COL9A3Q14050 684 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC11-210ENST00000513600 C8orf34Q49A92 452 aa11.23□□□□□ -0.61
TRAPPC11-210ENST00000513600 PERM1Q5SV97 790 aa11.23□□□□□ -0.61
TRAPPC11-210ENST00000513600 HFE2Q6ZVN8 426 aa11.23□□□□□ -0.61
TRAPPC11-210ENST00000513600 TTC9Q92623 222 aa11.23□□□□□ -0.61
TRAPPC11-210ENST00000513600 DCAF5Q96JK2 942 aa11.23□□□□□ -0.61
TRAPPC11-210ENST00000513600 GGNBP2Q9H3C7 697 aa11.23□□□□□ -0.61
TRAPPC11-210ENST00000513600 NID1P14543 1247 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms