RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 PTK2Q05397 1052 aa7.03□□□□□ -1.28
HTT-211ENST00000513326 UNC93B1Q9H1C4 597 aa7.03□□□□□ -1.28
HTT-211ENST00000513326 GRIN3BO60391 1043 aa7.02□□□□□ -1.29
HTT-211ENST00000513326 PTCRAQ6ISU1 281 aaPredicted RBP7.02□□□□□ -1.29
HTT-211ENST00000513326 COL23A1Q86Y22 540 aaPredicted RBP7.02□□□□□ -1.29
HTT-211ENST00000513326 ZNF592Q92610 1267 aa7.02□□□□□ -1.29
HTT-211ENST00000513326 CDCA7Q9BWT1 371 aaPredicted RBP7.02□□□□□ -1.29
HTT-211ENST00000513326 CABP1Q9NZU7 370 aa7.02□□□□□ -1.29
HTT-211ENST00000513326 NSD2O96028 1365 aa7.02□□□□□ -1.29
HTT-211ENST00000513326 KAT6BQ8WYB5 2073 aa7.02□□□□□ -1.29
HTT-211ENST00000513326 QRICH2Q9H0J4 1663 aa7.01□□□□□ -1.29
HTT-211ENST00000513326 SRPK2P78362 688 aaKnown RBP7.01□□□□□ -1.29
HTT-211ENST00000513326 NBPF1Q3BBV0 1214 aa7.01□□□□□ -1.29
HTT-211ENST00000513326 SMIM5Q71RC9 77 aa7.01□□□□□ -1.29
HTT-211ENST00000513326 AMIGO3Q86WK7 504 aa7.01□□□□□ -1.29
HTT-211ENST00000513326 SLC16A10Q8TF71 515 aa7.01□□□□□ -1.29
HTT-211ENST00000513326 TFCP2L1Q9NZI6 479 aa7.01□□□□□ -1.29
HTT-211ENST00000513326 FCF1Q9Y324 198 aaKnown RBP7.01□□□□□ -1.29
HTT-211ENST00000513326 CCDC7Q96M83 1385 aa7□□□□□ -1.29
HTT-211ENST00000513326 GGCXP38435 758 aa7□□□□□ -1.29
HTT-211ENST00000513326 MCCD1P59942 119 aaPredicted RBP7□□□□□ -1.29
HTT-211ENST00000513326 LY75O60449 1722 aa7□□□□□ -1.29
HTT-211ENST00000513326 DOT1LQ8TEK3 1739 aa7□□□□□ -1.29
HTT-211ENST00000513326 WDR90Q96KV7 1748 aa6.99□□□□□ -1.29
HTT-211ENST00000513326 TOGARAM1Q9Y4F4 1720 aa6.99□□□□□ -1.29
HTT-211ENST00000513326 ARHGAP9Q9BRR9 750 aa6.99□□□□□ -1.29
HTT-211ENST00000513326 PPP1R12CQ9BZL4 782 aa6.99□□□□□ -1.29
HTT-211ENST00000513326 NLRP2Q9NX02 1062 aa6.99□□□□□ -1.29
HTT-211ENST00000513326 TTC21BQ7Z4L5 1316 aa6.99□□□□□ -1.29
HTT-211ENST00000513326 IL2RBP14784 551 aa6.98□□□□□ -1.29
HTT-211ENST00000513326 SLC27A3Q5K4L6 730 aa6.98□□□□□ -1.29
HTT-211ENST00000513326 SH3BP5LQ7L8J4 393 aa6.98□□□□□ -1.29
HTT-211ENST00000513326 DDX54Q8TDD1 881 aaKnown RBP6.98□□□□□ -1.29
HTT-211ENST00000513326 BAP1Q92560 729 aa6.98□□□□□ -1.29
HTT-211ENST00000513326 OCSTAMPQ9BR26 566 aa6.98□□□□□ -1.29
HTT-211ENST00000513326 NMRK2Q9NPI5 230 aa6.98□□□□□ -1.29
HTT-211ENST00000513326 IGSF1Q8N6C5 1336 aa6.98□□□□□ -1.29
HTT-211ENST00000513326 PALM3A6NDB9 673 aaPredicted RBP6.97□□□□□ -1.29
HTT-211ENST00000513326 PRELPP51888 382 aa6.97□□□□□ -1.29
HTT-211ENST00000513326 ZBTB33Q86T24 672 aa6.97□□□□□ -1.29
HTT-211ENST00000513326 BPHLQ86WA6 291 aaPredicted RBP6.97□□□□□ -1.29
HTT-211ENST00000513326 TNS4Q8IZW8 715 aa6.97□□□□□ -1.29
HTT-211ENST00000513326 ANKLE1Q8NAG6 615 aa6.97□□□□□ -1.29
HTT-211ENST00000513326 ADAM32Q8TC27 787 aa6.97□□□□□ -1.29
HTT-211ENST00000513326 SYTL4Q96C24 671 aaPredicted RBP6.97□□□□□ -1.29
HTT-211ENST00000513326 UCN2Q96RP3 112 aa6.97□□□□□ -1.29
HTT-211ENST00000513326 LTN1O94822 1766 aa6.97□□□□□ -1.29
HTT-211ENST00000513326 CICQ96RK0 1608 aaPredicted RBP6.97□□□□□ -1.29
HTT-211ENST00000513326 CENPJQ9HC77 1338 aaPredicted RBP6.97□□□□□ -1.29
HTT-211ENST00000513326 USP54Q70EL1 1684 aa6.96□□□□□ -1.29
HTT-211ENST00000513326 RNF223E7ERA6 249 aa6.96□□□□□ -1.3
HTT-211ENST00000513326 PPEF1O14829 653 aaPredicted RBP6.96□□□□□ -1.3
HTT-211ENST00000513326 ZBTB24O43167 697 aaPredicted RBP6.96□□□□□ -1.3
HTT-211ENST00000513326 SH3RF1Q7Z6J0 888 aa6.96□□□□□ -1.3
HTT-211ENST00000513326 ZNF511Q8NB15 262 aa6.96□□□□□ -1.3
HTT-211ENST00000513326 NFATC2IPQ8NCF5 419 aa6.96□□□□□ -1.3
HTT-211ENST00000513326 KLRG1Q96E93 195 aa6.96□□□□□ -1.3
HTT-211ENST00000513326 TFIP11Q9UBB9 837 aaKnown RBP6.96□□□□□ -1.3
HTT-211ENST00000513326 CCNL1Q9UK58 526 aaPredicted RBP6.96□□□□□ -1.3
HTT-211ENST00000513326 PCDHB9Q9Y5E1 797 aa6.96□□□□□ -1.3
HTT-211ENST00000513326 CD2APQ9Y5K6 639 aa6.96□□□□□ -1.3
HTT-211ENST00000513326 C5P01031 1676 aa6.96□□□□□ -1.3
HTT-211ENST00000513326 MEGF6O75095 1541 aa6.96□□□□□ -1.3
HTT-211ENST00000513326 KIAA1551Q9HCM1 1747 aa6.96□□□□□ -1.3
HTT-211ENST00000513326 ANKRD36BQ8N2N9 1353 aa6.95□□□□□ -1.3
HTT-211ENST00000513326 RAB3GAP2Q9H2M9 1393 aa6.95□□□□□ -1.3
HTT-211ENST00000513326 AGERQ15109 404 aa6.95□□□□□ -1.3
HTT-211ENST00000513326 NME9Q86XW9 330 aa6.95□□□□□ -1.3
HTT-211ENST00000513326 JMYQ8N9B5 988 aa6.95□□□□□ -1.3
HTT-211ENST00000513326 KCNH5Q8NCM2 988 aa6.95□□□□□ -1.3
HTT-211ENST00000513326 ANKRD24Q8TF21 1146 aa6.95□□□□□ -1.3
HTT-211ENST00000513326 PBXIP1Q96AQ6 731 aa6.95□□□□□ -1.3
HTT-211ENST00000513326 FAM208AQ9UK61 1670 aaKnown RBP6.95□□□□□ -1.3
HTT-211ENST00000513326 KIAA1210Q9ULL0 1709 aa6.95□□□□□ -1.3
HTT-211ENST00000513326 RGPD2P0DJD1 1756 aa6.95□□□□□ -1.3
HTT-211ENST00000513326 PCNTO95613 3336 aa6.94□□□□□ -1.3
HTT-211ENST00000513326 MON2Q7Z3U7 1717 aa6.94□□□□□ -1.3
HTT-211ENST00000513326 MAGEB6P1A0A0J9YX57 407 aa6.94□□□□□ -1.3
HTT-211ENST00000513326 ATP9BO43861 1147 aa6.94□□□□□ -1.3
HTT-211ENST00000513326 TOMM70O94826 608 aa6.94□□□□□ -1.3
HTT-211ENST00000513326 RFX1P22670 979 aa6.94□□□□□ -1.3
HTT-211ENST00000513326 LMOD1P29536 600 aaPredicted RBP6.94□□□□□ -1.3
HTT-211ENST00000513326 LINC01559Q495D7 138 aa6.94□□□□□ -1.3
HTT-211ENST00000513326 PPP1R18Q6NYC8 613 aa6.94□□□□□ -1.3
HTT-211ENST00000513326 TBC1D9Q6ZT07 1266 aa6.94□□□□□ -1.3
HTT-211ENST00000513326 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.94□□□□□ -1.3
HTT-211ENST00000513326 LTV1Q96GA3 475 aaPredicted RBP6.94□□□□□ -1.3
HTT-211ENST00000513326 CEP126Q9P2H0 1117 aa6.94□□□□□ -1.3
HTT-211ENST00000513326 TAF1LQ8IZX4 1826 aa6.94□□□□□ -1.3
HTT-211ENST00000513326 PXDNLA1KZ92 1463 aa6.93□□□□□ -1.3
HTT-211ENST00000513326 CD163L1Q9NR16 1453 aa6.93□□□□□ -1.3
HTT-211ENST00000513326 FBLN1P23142 703 aa6.93□□□□□ -1.3
HTT-211ENST00000513326 SH3BP2P78314 561 aa6.93□□□□□ -1.3
HTT-211ENST00000513326 MMRN1Q13201 1228 aa6.93□□□□□ -1.3
HTT-211ENST00000513326 SLFNL1Q499Z3 407 aa6.93□□□□□ -1.3
HTT-211ENST00000513326 DZIP3Q86Y13 1208 aaKnown RBP6.93□□□□□ -1.3
HTT-211ENST00000513326 FOXJ1Q92949 421 aa6.93□□□□□ -1.3
HTT-211ENST00000513326 CARD14Q9BXL6 1004 aa6.93□□□□□ -1.3
HTT-211ENST00000513326 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.93□□□□□ -1.3
HTT-211ENST00000513326 MAFBQ9Y5Q3 323 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms