RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 COL11A2P13942 1736 aaPredicted RBP26.46■■□□□ 1.83
NEIL3-202ENST00000513321 FOXO4P98177 505 aa26.45■■□□□ 1.83
NEIL3-202ENST00000513321 GPR162Q16538 588 aa26.45■■□□□ 1.83
NEIL3-202ENST00000513321 CCDC152Q4G0S7 254 aa26.45■■□□□ 1.83
NEIL3-202ENST00000513321 DDX46Q7L014 1031 aaKnown RBP26.45■■□□□ 1.83
NEIL3-202ENST00000513321 ITPRIPQ8IWB1 547 aa26.45■■□□□ 1.83
NEIL3-202ENST00000513321 MEIS3Q99687 375 aa26.45■■□□□ 1.83
NEIL3-202ENST00000513321 EPHA10Q5JZY3 1008 aa26.44■■□□□ 1.82
NEIL3-202ENST00000513321 KAZALD1Q96I82 304 aa26.44■■□□□ 1.82
NEIL3-202ENST00000513321 CSF1RP07333 972 aa26.44■■□□□ 1.82
NEIL3-202ENST00000513321 UBTFL1P0CB47 393 aaPredicted RBP26.44■■□□□ 1.82
NEIL3-202ENST00000513321 YBX3P16989 372 aaKnown RBP eCLIP26.44■■□□□ 1.82
NEIL3-202ENST00000513321 PRPF40BQ6NWY9 871 aaKnown RBP26.44■■□□□ 1.82
NEIL3-202ENST00000513321 RRP1P56182 461 aaKnown RBP26.43■■□□□ 1.82
NEIL3-202ENST00000513321 PDE3AQ14432 1141 aa26.43■■□□□ 1.82
NEIL3-202ENST00000513321 C20orf194Q5TEA3 1177 aa26.43■■□□□ 1.82
NEIL3-202ENST00000513321 GNAI3P08754 354 aa26.42■■□□□ 1.82
NEIL3-202ENST00000513321 LAMB2P55268 1798 aa26.42■■□□□ 1.82
NEIL3-202ENST00000513321 DLEC1Q9Y238 1755 aa26.41■■□□□ 1.82
NEIL3-202ENST00000513321 LMBR1LQ6UX01 489 aa26.41■■□□□ 1.82
NEIL3-202ENST00000513321 GREM2Q9H772 168 aa26.41■■□□□ 1.82
NEIL3-202ENST00000513321 SEC31BQ9NQW1 1179 aa26.41■■□□□ 1.82
NEIL3-202ENST00000513321 BICC1Q9H694 974 aaKnown RBP26.4■■□□□ 1.82
NEIL3-202ENST00000513321 ZNF219Q9P2Y4 722 aaPredicted RBP26.4■■□□□ 1.82
NEIL3-202ENST00000513321 HDAC5Q9UQL6 1122 aa26.4■■□□□ 1.82
NEIL3-202ENST00000513321 COG6Q9Y2V7 657 aa26.4■■□□□ 1.82
NEIL3-202ENST00000513321 DCAF8L1A6NGE4 600 aa26.39■■□□□ 1.82
NEIL3-202ENST00000513321 BBOX1O75936 387 aa26.39■■□□□ 1.82
NEIL3-202ENST00000513321 GRAPQ13588 217 aa26.39■■□□□ 1.82
NEIL3-202ENST00000513321 GRAPLQ8TC17 118 aaPredicted RBP26.39■■□□□ 1.82
NEIL3-202ENST00000513321 BRCA1P38398 1863 aaKnown RBP26.39■■□□□ 1.82
NEIL3-202ENST00000513321 ZBTB7BO15156 539 aaPredicted RBP26.39■■□□□ 1.81
NEIL3-202ENST00000513321 CELF1Q92879 486 aaKnown RBP26.39■■□□□ 1.81
NEIL3-202ENST00000513321 CHMP3Q9Y3E7 222 aa26.39■■□□□ 1.81
NEIL3-202ENST00000513321 C21orf2O43822 256 aa26.38■■□□□ 1.81
NEIL3-202ENST00000513321 MVPQ14764 893 aaKnown RBP26.38■■□□□ 1.81
NEIL3-202ENST00000513321 FAM161AQ3B820 660 aa26.38■■□□□ 1.81
NEIL3-202ENST00000513321 LRRFIP2Q9Y608 721 aaKnown RBP26.38■■□□□ 1.81
NEIL3-202ENST00000513321 RTL9Q8NET4 1388 aa26.37■■□□□ 1.81
NEIL3-202ENST00000513321 RPS8P62241 208 aaKnown RBP26.37■■□□□ 1.81
NEIL3-202ENST00000513321 ANKRD44Q8N8A2 993 aa26.37■■□□□ 1.81
NEIL3-202ENST00000513321 C7orf43Q8WVR3 580 aa26.37■■□□□ 1.81
NEIL3-202ENST00000513321 SUPT16HQ9Y5B9 1047 aaKnown RBP26.37■■□□□ 1.81
NEIL3-202ENST00000513321 PPEF1O14829 653 aaPredicted RBP26.36■■□□□ 1.81
NEIL3-202ENST00000513321 ITGA6P23229 1130 aa26.36■■□□□ 1.81
NEIL3-202ENST00000513321 RABL6Q3YEC7 729 aaPredicted RBP26.36■■□□□ 1.81
NEIL3-202ENST00000513321 SLX4Q8IY92 1834 aa26.36■■□□□ 1.81
NEIL3-202ENST00000513321 GRIN3BO60391 1043 aa26.35■■□□□ 1.81
NEIL3-202ENST00000513321 GOLGB1Q14789 3259 aaKnown RBP26.35■■□□□ 1.81
NEIL3-202ENST00000513321 GNAI2P04899 355 aa26.34■■□□□ 1.81
NEIL3-202ENST00000513321 IFIT5Q13325 482 aaKnown RBP26.34■■□□□ 1.81
NEIL3-202ENST00000513321 CDC5LQ99459 802 aaKnown RBP26.34■■□□□ 1.81
NEIL3-202ENST00000513321 DDX19BQ9UMR2 479 aa26.34■■□□□ 1.81
NEIL3-202ENST00000513321 ANKRD18BA2A2Z9 1011 aa26.34■■□□□ 1.81
NEIL3-202ENST00000513321 CCDC57Q2TAC2 916 aa26.34■■□□□ 1.81
NEIL3-202ENST00000513321 OLFM4Q6UX06 510 aa26.34■■□□□ 1.81
NEIL3-202ENST00000513321 ANKRD18AQ8IVF6 992 aa26.34■■□□□ 1.81
NEIL3-202ENST00000513321 MYH3P11055 1940 aa26.33■■□□□ 1.81
NEIL3-202ENST00000513321 ARHGAP27Q6ZUM4 889 aa26.33■■□□□ 1.81
NEIL3-202ENST00000513321 ATP6V0A2Q9Y487 856 aa26.33■■□□□ 1.81
NEIL3-202ENST00000513321 TMC4Q7Z404 712 aa26.32■■□□□ 1.8
NEIL3-202ENST00000513321 SLC51AQ86UW1 340 aa26.32■■□□□ 1.8
NEIL3-202ENST00000513321 SP8Q8IXZ3 490 aa26.32■■□□□ 1.8
NEIL3-202ENST00000513321 TAF1P21675 1872 aa26.32■■□□□ 1.8
NEIL3-202ENST00000513321 SOGA3Q5TF21 947 aa26.31■■□□□ 1.8
NEIL3-202ENST00000513321 COL4A1P02462 1669 aa26.3■■□□□ 1.8
NEIL3-202ENST00000513321 CC2D2BQ6DHV5 1058 aa26.3■■□□□ 1.8
NEIL3-202ENST00000513321 TMX4Q9H1E5 349 aaPredicted RBP26.3■■□□□ 1.8
NEIL3-202ENST00000513321 IGHMBP2P38935 993 aaKnown RBP26.29■■□□□ 1.8
NEIL3-202ENST00000513321 CACNA1SQ13698 1873 aa26.29■■□□□ 1.8
NEIL3-202ENST00000513321 CCDC93Q567U6 631 aa26.29■■□□□ 1.8
NEIL3-202ENST00000513321 C1orf115Q9H7X2 142 aa26.29■■□□□ 1.8
NEIL3-202ENST00000513321 ZNF594Q96JF6 807 aaPredicted RBP26.29■■□□□ 1.8
NEIL3-202ENST00000513321 CHMP4BQ9H444 224 aaKnown RBP26.29■■□□□ 1.8
NEIL3-202ENST00000513321 ARFGEF1Q9Y6D6 1849 aa26.28■■□□□ 1.8
NEIL3-202ENST00000513321 TAF7LQ5H9L4 462 aa26.28■■□□□ 1.8
NEIL3-202ENST00000513321 MPHOSPH8Q99549 860 aa26.28■■□□□ 1.8
NEIL3-202ENST00000513321 ZBTB40Q9NUA8 1239 aa26.28■■□□□ 1.8
NEIL3-202ENST00000513321 BSDC1Q9NW68 430 aaPredicted RBP26.28■■□□□ 1.8
NEIL3-202ENST00000513321 RTKN2Q8IZC4 609 aa26.27■■□□□ 1.8
NEIL3-202ENST00000513321 MTX1Q13505 466 aa26.25■■□□□ 1.79
NEIL3-202ENST00000513321 GRIPAP1Q4V328 841 aa26.25■■□□□ 1.79
NEIL3-202ENST00000513321 NFKBIEO00221 500 aa26.24■■□□□ 1.79
NEIL3-202ENST00000513321 LDHAL6AQ6ZMR3 332 aa26.24■■□□□ 1.79
NEIL3-202ENST00000513321 SRGAP3O43295 1099 aa26.24■■□□□ 1.79
NEIL3-202ENST00000513321 RFX5P48382 616 aaPredicted RBP26.24■■□□□ 1.79
NEIL3-202ENST00000513321 MPNDQ8N594 471 aa26.24■■□□□ 1.79
NEIL3-202ENST00000513321 KLHDC4Q8TBB5 520 aa26.24■■□□□ 1.79
NEIL3-202ENST00000513321 CRBNQ96SW2 442 aa26.24■■□□□ 1.79
NEIL3-202ENST00000513321 MINPP1Q9UNW1 487 aa26.24■■□□□ 1.79
NEIL3-202ENST00000513321 NSFL1CQ9UNZ2 370 aaKnown RBP26.23■■□□□ 1.79
NEIL3-202ENST00000513321 GPSM2P81274 684 aa26.22■■□□□ 1.79
NEIL3-202ENST00000513321 ATP8B2P98198 1209 aa26.22■■□□□ 1.79
NEIL3-202ENST00000513321 RASSF7Q02833 373 aa26.22■■□□□ 1.79
NEIL3-202ENST00000513321 TAOK3Q9H2K8 898 aa26.22■■□□□ 1.79
NEIL3-202ENST00000513321 CNNM1Q9NRU3 951 aa26.22■■□□□ 1.79
NEIL3-202ENST00000513321 SNED1Q8TER0 1413 aa26.21■■□□□ 1.79
NEIL3-202ENST00000513321 PNMA6EA0A0J9YXQ4 647 aa26.21■■□□□ 1.79
NEIL3-202ENST00000513321 FKBP4Q02790 459 aaKnown RBP eCLIP26.21■■□□□ 1.79
NEIL3-202ENST00000513321 PTPN12Q05209 780 aaKnown RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms