RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 TIAM2Q8IVF5 1701 aa22.63■■□□□ 1.21
DDR1-272ENST00000513243 GLTPD2A6NH11 291 aa22.63■■□□□ 1.21
DDR1-272ENST00000513243 PDE8AO60658 829 aa22.63■■□□□ 1.21
DDR1-272ENST00000513243 C1QTNF8P60827 252 aa22.63■■□□□ 1.21
DDR1-272ENST00000513243 SP8Q8IXZ3 490 aa22.63■■□□□ 1.21
DDR1-272ENST00000513243 LINS1Q8NG48 757 aa22.63■■□□□ 1.21
DDR1-272ENST00000513243 DICER1Q9UPY3 1922 aaKnown RBP22.63■■□□□ 1.21
DDR1-272ENST00000513243 H7C1W4 665 aa22.62■■□□□ 1.21
DDR1-272ENST00000513243 IARSP41252 1262 aaKnown RBP22.62■■□□□ 1.21
DDR1-272ENST00000513243 GCKRQ14397 625 aa22.62■■□□□ 1.21
DDR1-272ENST00000513243 CELF1Q92879 486 aaKnown RBP22.62■■□□□ 1.21
DDR1-272ENST00000513243 TAF1P21675 1872 aa22.62■■□□□ 1.21
DDR1-272ENST00000513243 MRPL50Q8N5N7 158 aaKnown RBP22.61■■□□□ 1.21
DDR1-272ENST00000513243 TMX4Q9H1E5 349 aaPredicted RBP22.61■■□□□ 1.21
DDR1-272ENST00000513243 BEND3Q5T5X7 828 aa22.6■■□□□ 1.21
DDR1-272ENST00000513243 UBE3BQ7Z3V4 1068 aa22.6■■□□□ 1.21
DDR1-272ENST00000513243 SSH1Q8WYL5 1049 aa22.6■■□□□ 1.21
DDR1-272ENST00000513243 RRAGCQ9HB90 399 aa22.6■■□□□ 1.21
DDR1-272ENST00000513243 COL4A1P02462 1669 aa22.59■■□□□ 1.21
DDR1-272ENST00000513243 CCDC152Q4G0S7 254 aa22.59■■□□□ 1.21
DDR1-272ENST00000513243 DPY19L2Q6NUT2 758 aa22.59■■□□□ 1.21
DDR1-272ENST00000513243 TMC4Q7Z404 712 aa22.59■■□□□ 1.21
DDR1-272ENST00000513243 CCDC85AQ96PX6 553 aaPredicted RBP22.59■■□□□ 1.21
DDR1-272ENST00000513243 SEC31BQ9NQW1 1179 aa22.59■■□□□ 1.21
DDR1-272ENST00000513243 CASP7P55210 303 aa22.58■■□□□ 1.21
DDR1-272ENST00000513243 RPS8P62241 208 aaKnown RBP22.58■■□□□ 1.21
DDR1-272ENST00000513243 CTSWP56202 376 aa22.57■■□□□ 1.2
DDR1-272ENST00000513243 DPP8Q6V1X1 898 aaPredicted RBP22.57■■□□□ 1.2
DDR1-272ENST00000513243 MPNDQ8N594 471 aa22.57■■□□□ 1.2
DDR1-272ENST00000513243 BCL2L13Q9BXK5 485 aa22.57■■□□□ 1.2
DDR1-272ENST00000513243 RTFDC1Q9BY42 306 aaPredicted RBP22.57■■□□□ 1.2
DDR1-272ENST00000513243 TTLL11Q8NHH1 800 aa22.56■■□□□ 1.2
DDR1-272ENST00000513243 DDNO94850 711 aaPredicted RBP22.55■■□□□ 1.2
DDR1-272ENST00000513243 HNRNPUQ00839 825 aaKnown RBP eCLIP22.55■■□□□ 1.2
DDR1-272ENST00000513243 ALDH1L2Q3SY69 923 aa22.55■■□□□ 1.2
DDR1-272ENST00000513243 SLC4A10Q6U841 1118 aa22.55■■□□□ 1.2
DDR1-272ENST00000513243 COL4A5P29400 1685 aa22.55■■□□□ 1.2
DDR1-272ENST00000513243 POTECB2RU33 542 aa22.54■■□□□ 1.2
DDR1-272ENST00000513243 FZD9O00144 591 aa22.54■■□□□ 1.2
DDR1-272ENST00000513243 TOMM70O94826 608 aa22.54■■□□□ 1.2
DDR1-272ENST00000513243 CT47B1P0C2W7 299 aaPredicted RBP22.54■■□□□ 1.2
DDR1-272ENST00000513243 LARGE2Q8N3Y3 721 aa22.54■■□□□ 1.2
DDR1-272ENST00000513243 SUPT20HQ8NEM7 779 aa22.54■■□□□ 1.2
DDR1-272ENST00000513243 JDP2Q8WYK2 163 aa22.54■■□□□ 1.2
DDR1-272ENST00000513243 PLA2G12BQ9BX93 195 aa22.54■■□□□ 1.2
DDR1-272ENST00000513243 ZNF541Q9H0D2 1346 aa22.54■■□□□ 1.2
DDR1-272ENST00000513243 PPIP5K2O43314 1243 aa22.53■■□□□ 1.2
DDR1-272ENST00000513243 VEGFAP15692 232 aaPredicted RBP22.53■■□□□ 1.2
DDR1-272ENST00000513243 AOC3Q16853 763 aa22.53■■□□□ 1.2
DDR1-272ENST00000513243 VPS33BQ9H267 617 aa22.53■■□□□ 1.2
DDR1-272ENST00000513243 GREM2Q9H772 168 aa22.53■■□□□ 1.2
DDR1-272ENST00000513243 NSFL1CQ9UNZ2 370 aaKnown RBP22.53■■□□□ 1.2
DDR1-272ENST00000513243 LRRC37AA6NMS7 1700 aa22.53■■□□□ 1.2
DDR1-272ENST00000513243 PTPRCP08575 1304 aa22.53■■□□□ 1.2
DDR1-272ENST00000513243 ALDH1L1O75891 902 aa22.52■■□□□ 1.2
DDR1-272ENST00000513243 GPSM2P81274 684 aa22.52■■□□□ 1.2
DDR1-272ENST00000513243 SRCIN1Q9C0H9 1055 aa22.52■■□□□ 1.2
DDR1-272ENST00000513243 SMC4Q9NTJ3 1288 aa22.52■■□□□ 1.2
DDR1-272ENST00000513243 ANKRD18AQ8IVF6 992 aa22.51■■□□□ 1.19
DDR1-272ENST00000513243 C16orf71Q8IYS4 520 aaPredicted RBP22.51■■□□□ 1.19
DDR1-272ENST00000513243 RTL9Q8NET4 1388 aa22.5■■□□□ 1.19
DDR1-272ENST00000513243 GRM8O00222 908 aa22.5■■□□□ 1.19
DDR1-272ENST00000513243 CSF1RP07333 972 aa22.5■■□□□ 1.19
DDR1-272ENST00000513243 NIM1KQ8IY84 436 aa22.5■■□□□ 1.19
DDR1-272ENST00000513243 WDR90Q96KV7 1748 aa22.5■■□□□ 1.19
DDR1-272ENST00000513243 DUOX1Q9NRD9 1551 aa22.5■■□□□ 1.19
DDR1-272ENST00000513243 KIAA2012Q0VF49 1180 aa22.49■■□□□ 1.19
DDR1-272ENST00000513243 CDC5LQ99459 802 aaKnown RBP22.49■■□□□ 1.19
DDR1-272ENST00000513243 POLLQ9UGP5 575 aa22.49■■□□□ 1.19
DDR1-272ENST00000513243 EIF6P56537 245 aaKnown RBP22.48■■□□□ 1.19
DDR1-272ENST00000513243 FOXO4P98177 505 aa22.48■■□□□ 1.19
DDR1-272ENST00000513243 RBM46Q8TBY0 533 aaKnown RBP22.48■■□□□ 1.19
DDR1-272ENST00000513243 L3MBTL3Q96JM7 780 aaPredicted RBP22.48■■□□□ 1.19
DDR1-272ENST00000513243 C9orf78Q9NZ63 289 aaPredicted RBP22.48■■□□□ 1.19
DDR1-272ENST00000513243 MYH3P11055 1940 aa22.48■■□□□ 1.19
DDR1-272ENST00000513243 C6orf229H3BNL8 230 aa22.47■■□□□ 1.19
DDR1-272ENST00000513243 RARSP54136 660 aaKnown RBP22.47■■□□□ 1.19
DDR1-272ENST00000513243 FAM161AQ3B820 660 aa22.47■■□□□ 1.19
DDR1-272ENST00000513243 PODXL2Q9NZ53 605 aa22.47■■□□□ 1.19
DDR1-272ENST00000513243 ITGA6P23229 1130 aa22.46■■□□□ 1.19
DDR1-272ENST00000513243 BRPF1P55201 1214 aaPredicted RBP22.46■■□□□ 1.19
DDR1-272ENST00000513243 WASHC4Q2M389 1173 aa22.46■■□□□ 1.19
DDR1-272ENST00000513243 EPHA10Q5JZY3 1008 aa22.46■■□□□ 1.19
DDR1-272ENST00000513243 GPC2Q8N158 579 aa22.46■■□□□ 1.19
DDR1-272ENST00000513243 TBC1D16Q8TBP0 767 aa22.46■■□□□ 1.19
DDR1-272ENST00000513243 ZNRF3Q9ULT6 936 aa22.46■■□□□ 1.19
DDR1-272ENST00000513243 LTBP1Q14766 1721 aa22.45■■□□□ 1.19
DDR1-272ENST00000513243 BSDC1Q9NW68 430 aaPredicted RBP22.45■■□□□ 1.18
DDR1-272ENST00000513243 ANKIB1Q9P2G1 1089 aa22.45■■□□□ 1.18
DDR1-272ENST00000513243 NOB1Q9ULX3 412 aaKnown RBP22.45■■□□□ 1.18
DDR1-272ENST00000513243 GJA3Q9Y6H8 435 aa22.45■■□□□ 1.18
DDR1-272ENST00000513243 NBPF7P0C2Y1 421 aaPredicted RBP22.44■■□□□ 1.18
DDR1-272ENST00000513243 GPR101Q96P66 508 aaPredicted RBP22.44■■□□□ 1.18
DDR1-272ENST00000513243 UTYO14607 1347 aa22.43■■□□□ 1.18
DDR1-272ENST00000513243 IQCA1LA6NCM1 817 aa22.43■■□□□ 1.18
DDR1-272ENST00000513243 RIMBP2O15034 1052 aa22.43■■□□□ 1.18
DDR1-272ENST00000513243 CXCL9Q07325 125 aa22.43■■□□□ 1.18
DDR1-272ENST00000513243 LMBR1LQ6UX01 489 aa22.43■■□□□ 1.18
DDR1-272ENST00000513243 GGA1Q9UJY5 639 aa22.43■■□□□ 1.18
DDR1-272ENST00000513243 MINPP1Q9UNW1 487 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms