RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 NPR1P16066 1061 aa20.73■□□□□ 0.91
HMGCL-209ENST00000513148 TMEM57Q8N5G2 664 aa20.73■□□□□ 0.91
HMGCL-209ENST00000513148 TAF1P21675 1872 aa20.73■□□□□ 0.91
HMGCL-209ENST00000513148 HSP90B1P14625 803 aaKnown RBP20.73■□□□□ 0.91
HMGCL-209ENST00000513148 INTS3Q68E01 1043 aaKnown RBP20.73■□□□□ 0.91
HMGCL-209ENST00000513148 PANK1Q8TE04 598 aa20.73■□□□□ 0.91
HMGCL-209ENST00000513148 GPR162Q16538 588 aa20.72■□□□□ 0.91
HMGCL-209ENST00000513148 STYK1Q6J9G0 422 aa20.72■□□□□ 0.91
HMGCL-209ENST00000513148 TTLL6Q8N841 843 aa20.72■□□□□ 0.91
HMGCL-209ENST00000513148 YBX3P16989 372 aaKnown RBP eCLIP20.71■□□□□ 0.91
HMGCL-209ENST00000513148 DALRD3Q5D0E6 543 aaKnown RBP20.71■□□□□ 0.91
HMGCL-209ENST00000513148 USP44Q9H0E7 712 aa20.71■□□□□ 0.91
HMGCL-209ENST00000513148 SLX4Q8IY92 1834 aa20.71■□□□□ 0.91
HMGCL-209ENST00000513148 CTSWP56202 376 aa20.71■□□□□ 0.91
HMGCL-209ENST00000513148 ITPRIPQ8IWB1 547 aa20.71■□□□□ 0.91
HMGCL-209ENST00000513148 ZNF219Q9P2Y4 722 aaPredicted RBP20.71■□□□□ 0.91
HMGCL-209ENST00000513148 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.7■□□□□ 0.9
HMGCL-209ENST00000513148 RBM17Q96I25 401 aaKnown RBP20.7■□□□□ 0.9
HMGCL-209ENST00000513148 PRPF40BQ6NWY9 871 aaKnown RBP20.7■□□□□ 0.9
HMGCL-209ENST00000513148 CNKSR1Q969H4 720 aa20.7■□□□□ 0.9
HMGCL-209ENST00000513148 SUCLG2Q96I99 432 aa20.7■□□□□ 0.9
HMGCL-209ENST00000513148 MEIS3Q99687 375 aa20.7■□□□□ 0.9
HMGCL-209ENST00000513148 SF3B3Q15393 1217 aaKnown RBP20.69■□□□□ 0.9
HMGCL-209ENST00000513148 DDX46Q7L014 1031 aaKnown RBP20.69■□□□□ 0.9
HMGCL-209ENST00000513148 ARFGEF1Q9Y6D6 1849 aa20.69■□□□□ 0.9
HMGCL-209ENST00000513148 COL4A1P02462 1669 aa20.69■□□□□ 0.9
HMGCL-209ENST00000513148 UTYO14607 1347 aa20.68■□□□□ 0.9
HMGCL-209ENST00000513148 CCDC152Q4G0S7 254 aa20.68■□□□□ 0.9
HMGCL-209ENST00000513148 CHMP3Q9Y3E7 222 aa20.68■□□□□ 0.9
HMGCL-209ENST00000513148 UBTFL1P0CB47 393 aaPredicted RBP20.68■□□□□ 0.9
HMGCL-209ENST00000513148 ALDH1B1P30837 517 aa20.68■□□□□ 0.9
HMGCL-209ENST00000513148 HOXA10P31260 410 aaPredicted RBP20.68■□□□□ 0.9
HMGCL-209ENST00000513148 EPHA10Q5JZY3 1008 aa20.68■□□□□ 0.9
HMGCL-209ENST00000513148 C20orf194Q5TEA3 1177 aa20.68■□□□□ 0.9
HMGCL-209ENST00000513148 TTLL11Q8NHH1 800 aa20.68■□□□□ 0.9
HMGCL-209ENST00000513148 PLA2G12BQ9BX93 195 aa20.68■□□□□ 0.9
HMGCL-209ENST00000513148 SEC31BQ9NQW1 1179 aa20.67■□□□□ 0.9
HMGCL-209ENST00000513148 SPEF2Q9C093 1822 aa20.67■□□□□ 0.9
HMGCL-209ENST00000513148 FOXO4P98177 505 aa20.66■□□□□ 0.9
HMGCL-209ENST00000513148 CRAMP1Q96RY5 1269 aa20.66■□□□□ 0.9
HMGCL-209ENST00000513148 GREM2Q9H772 168 aa20.66■□□□□ 0.9
HMGCL-209ENST00000513148 DCAF8L1A6NGE4 600 aa20.66■□□□□ 0.9
HMGCL-209ENST00000513148 C21orf2O43822 256 aa20.66■□□□□ 0.9
HMGCL-209ENST00000513148 MS4A1P11836 297 aa20.66■□□□□ 0.9
HMGCL-209ENST00000513148 RRP1P56182 461 aaKnown RBP20.66■□□□□ 0.9
HMGCL-209ENST00000513148 FAM161AQ3B820 660 aa20.66■□□□□ 0.9
HMGCL-209ENST00000513148 SLC51AQ86UW1 340 aa20.66■□□□□ 0.9
HMGCL-209ENST00000513148 KAZALD1Q96I82 304 aa20.66■□□□□ 0.9
HMGCL-209ENST00000513148 BICC1Q9H694 974 aaKnown RBP20.66■□□□□ 0.9
HMGCL-209ENST00000513148 LMBR1LQ6UX01 489 aa20.65■□□□□ 0.9
HMGCL-209ENST00000513148 COG6Q9Y2V7 657 aa20.65■□□□□ 0.9
HMGCL-209ENST00000513148 GRAPQ13588 217 aa20.65■□□□□ 0.9
HMGCL-209ENST00000513148 OLFM4Q6UX06 510 aa20.65■□□□□ 0.9
HMGCL-209ENST00000513148 GRAPLQ8TC17 118 aaPredicted RBP20.65■□□□□ 0.9
HMGCL-209ENST00000513148 CELF1Q92879 486 aaKnown RBP20.65■□□□□ 0.9
HMGCL-209ENST00000513148 PPEF1O14829 653 aaPredicted RBP20.64■□□□□ 0.89
HMGCL-209ENST00000513148 LRRFIP2Q9Y608 721 aaKnown RBP20.64■□□□□ 0.89
HMGCL-209ENST00000513148 CSF1RP07333 972 aa20.63■□□□□ 0.89
HMGCL-209ENST00000513148 GNAI3P08754 354 aa20.63■□□□□ 0.89
HMGCL-209ENST00000513148 ITGA6P23229 1130 aa20.63■□□□□ 0.89
HMGCL-209ENST00000513148 MVPQ14764 893 aaKnown RBP20.62■□□□□ 0.89
HMGCL-209ENST00000513148 ANKRD44Q8N8A2 993 aa20.61■□□□□ 0.89
HMGCL-209ENST00000513148 PDE3AQ14432 1141 aa20.61■□□□□ 0.89
HMGCL-209ENST00000513148 ARHGAP27Q6ZUM4 889 aa20.61■□□□□ 0.89
HMGCL-209ENST00000513148 RTL9Q8NET4 1388 aa20.6■□□□□ 0.89
HMGCL-209ENST00000513148 CDC5LQ99459 802 aaKnown RBP20.6■□□□□ 0.89
HMGCL-209ENST00000513148 C1orf115Q9H7X2 142 aa20.6■□□□□ 0.89
HMGCL-209ENST00000513148 GRIN3BO60391 1043 aa20.6■□□□□ 0.89
HMGCL-209ENST00000513148 RPS8P62241 208 aaKnown RBP20.6■□□□□ 0.89
HMGCL-209ENST00000513148 IFIT5Q13325 482 aaKnown RBP20.6■□□□□ 0.89
HMGCL-209ENST00000513148 ANKRD18AQ8IVF6 992 aa20.6■□□□□ 0.89
HMGCL-209ENST00000513148 C7orf43Q8WVR3 580 aa20.6■□□□□ 0.89
HMGCL-209ENST00000513148 ANKRD18BA2A2Z9 1011 aa20.59■□□□□ 0.89
HMGCL-209ENST00000513148 ZBTB7BO15156 539 aaPredicted RBP20.59■□□□□ 0.89
HMGCL-209ENST00000513148 BBOX1O75936 387 aa20.59■□□□□ 0.89
HMGCL-209ENST00000513148 CCDC57Q2TAC2 916 aa20.59■□□□□ 0.89
HMGCL-209ENST00000513148 RABL6Q3YEC7 729 aaPredicted RBP20.59■□□□□ 0.89
HMGCL-209ENST00000513148 HDAC5Q9UQL6 1122 aa20.58■□□□□ 0.89
HMGCL-209ENST00000513148 GNAI2P04899 355 aa20.58■□□□□ 0.88
HMGCL-209ENST00000513148 CCDC93Q567U6 631 aa20.58■□□□□ 0.88
HMGCL-209ENST00000513148 TAF7LQ5H9L4 462 aa20.58■□□□□ 0.88
HMGCL-209ENST00000513148 ZNF594Q96JF6 807 aaPredicted RBP20.58■□□□□ 0.88
HMGCL-209ENST00000513148 DDX19BQ9UMR2 479 aa20.58■□□□□ 0.88
HMGCL-209ENST00000513148 ATP6V0A2Q9Y487 856 aa20.58■□□□□ 0.88
HMGCL-209ENST00000513148 LRRC37AA6NMS7 1700 aa20.57■□□□□ 0.88
HMGCL-209ENST00000513148 FER1L6Q2WGJ9 1857 aa20.57■□□□□ 0.88
HMGCL-209ENST00000513148 IGHMBP2P38935 993 aaKnown RBP20.57■□□□□ 0.88
HMGCL-209ENST00000513148 TMX4Q9H1E5 349 aaPredicted RBP20.57■□□□□ 0.88
HMGCL-209ENST00000513148 RASSF7Q02833 373 aa20.56■□□□□ 0.88
HMGCL-209ENST00000513148 SOGA3Q5TF21 947 aa20.56■□□□□ 0.88
HMGCL-209ENST00000513148 IPO9Q96P70 1041 aaKnown RBP20.56■□□□□ 0.88
HMGCL-209ENST00000513148 MPHOSPH8Q99549 860 aa20.56■□□□□ 0.88
HMGCL-209ENST00000513148 SP8Q8IXZ3 490 aa20.55■□□□□ 0.88
HMGCL-209ENST00000513148 KLHDC4Q8TBB5 520 aa20.55■□□□□ 0.88
HMGCL-209ENST00000513148 NFKBIEO00221 500 aa20.54■□□□□ 0.88
HMGCL-209ENST00000513148 TMC4Q7Z404 712 aa20.54■□□□□ 0.88
HMGCL-209ENST00000513148 RTKN2Q8IZC4 609 aa20.53■□□□□ 0.88
HMGCL-209ENST00000513148 BSDC1Q9NW68 430 aaPredicted RBP20.53■□□□□ 0.88
HMGCL-209ENST00000513148 TAOK3Q9H2K8 898 aa20.53■□□□□ 0.88
HMGCL-209ENST00000513148 NSFL1CQ9UNZ2 370 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms