RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 EGFRP00533 1210 aa9.72□□□□□ -0.85
CHD1-209ENST00000512844 PDGFAP04085 211 aa9.72□□□□□ -0.85
CHD1-209ENST00000512844 EHHADHQ08426 723 aa9.72□□□□□ -0.85
CHD1-209ENST00000512844 TTC39BQ5VTQ0 682 aaPredicted RBP9.72□□□□□ -0.85
CHD1-209ENST00000512844 LYPD4Q6UWN0 246 aa9.72□□□□□ -0.85
CHD1-209ENST00000512844 ZNF438Q7Z4V0 828 aa9.72□□□□□ -0.85
CHD1-209ENST00000512844 NLRP13Q86W25 1043 aa9.72□□□□□ -0.85
CHD1-209ENST00000512844 TMC1Q8TDI8 760 aa9.72□□□□□ -0.85
CHD1-209ENST00000512844 EDARADDQ8WWZ3 215 aa9.72□□□□□ -0.85
CHD1-209ENST00000512844 HCN2Q9UL51 889 aa9.72□□□□□ -0.85
CHD1-209ENST00000512844 POLIQ9UNA4 740 aa9.72□□□□□ -0.85
CHD1-209ENST00000512844 KCNMB2Q9Y691 235 aa9.72□□□□□ -0.85
CHD1-209ENST00000512844 OIP5O43482 229 aa9.71□□□□□ -0.86
CHD1-209ENST00000512844 PSAPP07602 524 aa9.71□□□□□ -0.86
CHD1-209ENST00000512844 ELOA3CA0A087WX78 387 aaPredicted RBP9.7□□□□□ -0.86
CHD1-209ENST00000512844 ELOA3DA6NLF2 546 aaPredicted RBP9.7□□□□□ -0.86
CHD1-209ENST00000512844 EPXP11678 715 aa9.7□□□□□ -0.86
CHD1-209ENST00000512844 TARSP26639 723 aaKnown RBP9.7□□□□□ -0.86
CHD1-209ENST00000512844 ELOA3BQ3SY89 546 aa9.7□□□□□ -0.86
CHD1-209ENST00000512844 ZNF385CQ66K41 422 aaPredicted RBP9.7□□□□□ -0.86
CHD1-209ENST00000512844 PDE12Q6L8Q7 609 aaKnown RBP9.7□□□□□ -0.86
CHD1-209ENST00000512844 ELOA3Q8NG57 546 aa9.7□□□□□ -0.86
CHD1-209ENST00000512844 RRAGCQ9HB90 399 aa9.7□□□□□ -0.86
CHD1-209ENST00000512844 ZBTB7CA1YPR0 619 aa9.69□□□□□ -0.86
CHD1-209ENST00000512844 MAP3K6O95382 1288 aa9.69□□□□□ -0.86
CHD1-209ENST00000512844 GRNP28799 593 aaKnown RBP9.69□□□□□ -0.86
CHD1-209ENST00000512844 ADH7P40394 386 aa9.69□□□□□ -0.86
CHD1-209ENST00000512844 PDE3BQ13370 1112 aa9.69□□□□□ -0.86
CHD1-209ENST00000512844 TRIP4Q15650 581 aaPredicted RBP9.69□□□□□ -0.86
CHD1-209ENST00000512844 WHAMMQ8TF30 809 aa9.69□□□□□ -0.86
CHD1-209ENST00000512844 PHF20L1A8MW92 1017 aa9.68□□□□□ -0.86
CHD1-209ENST00000512844 MARSP56192 900 aaKnown RBP9.68□□□□□ -0.86
CHD1-209ENST00000512844 PLAURQ03405 335 aa9.68□□□□□ -0.86
CHD1-209ENST00000512844 DHX32Q7L7V1 743 aaKnown RBP9.68□□□□□ -0.86
CHD1-209ENST00000512844 FCHSD1Q86WN1 690 aa9.68□□□□□ -0.86
CHD1-209ENST00000512844 TNFRSF25Q93038 417 aa9.68□□□□□ -0.86
CHD1-209ENST00000512844 FZD6O60353 706 aa9.67□□□□□ -0.86
CHD1-209ENST00000512844 PODNQ7Z5L7 613 aa9.67□□□□□ -0.86
CHD1-209ENST00000512844 RBSNQ9H1K0 784 aa9.67□□□□□ -0.86
CHD1-209ENST00000512844 ELP3Q9H9T3 547 aa9.67□□□□□ -0.86
CHD1-209ENST00000512844 CCDC87Q9NVE4 849 aa9.67□□□□□ -0.86
CHD1-209ENST00000512844 DNAJB12Q9NXW2 375 aaKnown RBP9.67□□□□□ -0.86
CHD1-209ENST00000512844 ABI2Q9NYB9 513 aaPredicted RBP9.67□□□□□ -0.86
CHD1-209ENST00000512844 ADARB2-AS1A8MUL3 147 aa9.66□□□□□ -0.86
CHD1-209ENST00000512844 NEFLP07196 543 aa9.66□□□□□ -0.86
CHD1-209ENST00000512844 ARHGAP4P98171 946 aa9.66□□□□□ -0.86
CHD1-209ENST00000512844 CITED4Q96RK1 184 aa9.66□□□□□ -0.86
CHD1-209ENST00000512844 TLR7Q9NYK1 1049 aaKnown RBP9.66□□□□□ -0.86
CHD1-209ENST00000512844 ZFATQ9P243 1243 aa9.66□□□□□ -0.86
CHD1-209ENST00000512844 STK17AQ9UEE5 414 aa9.66□□□□□ -0.86
CHD1-209ENST00000512844 KLF15Q9UIH9 416 aa9.66□□□□□ -0.86
CHD1-209ENST00000512844 PIK3R2O00459 728 aa9.65□□□□□ -0.86
CHD1-209ENST00000512844 MMP20O60882 483 aa9.65□□□□□ -0.86
CHD1-209ENST00000512844 MAPK1P28482 360 aa9.65□□□□□ -0.86
CHD1-209ENST00000512844 KANK3Q6NY19 840 aa9.65□□□□□ -0.86
CHD1-209ENST00000512844 SPACA7Q96KW9 195 aa9.65□□□□□ -0.86
CHD1-209ENST00000512844 DCTN4Q9UJW0 460 aa9.65□□□□□ -0.86
CHD1-209ENST00000512844 NRLP54845 237 aa9.64□□□□□ -0.87
CHD1-209ENST00000512844 CHSY3Q70JA7 882 aa9.64□□□□□ -0.87
CHD1-209ENST00000512844 FAM35AQ86V20 835 aa9.64□□□□□ -0.87
CHD1-209ENST00000512844 MICALL1Q8N3F8 863 aa9.64□□□□□ -0.87
CHD1-209ENST00000512844 PMEPA1Q969W9 287 aa9.64□□□□□ -0.87
CHD1-209ENST00000512844 SLC6A14Q9UN76 642 aa9.64□□□□□ -0.87
CHD1-209ENST00000512844 GHRHP01286 108 aa9.63□□□□□ -0.87
CHD1-209ENST00000512844 LORP23490 312 aaPredicted RBP9.63□□□□□ -0.87
CHD1-209ENST00000512844 SOX18P35713 384 aa9.63□□□□□ -0.87
CHD1-209ENST00000512844 GPLD1P80108 840 aa9.63□□□□□ -0.87
CHD1-209ENST00000512844 MLLT1Q03111 559 aaPredicted RBP9.63□□□□□ -0.87
CHD1-209ENST00000512844 HYAL2Q12891 473 aa9.63□□□□□ -0.87
CHD1-209ENST00000512844 GJD3Q8N144 294 aa9.63□□□□□ -0.87
CHD1-209ENST00000512844 SNX29Q8TEQ0 813 aa9.63□□□□□ -0.87
CHD1-209ENST00000512844 BTBD6Q96KE9 485 aa9.63□□□□□ -0.87
CHD1-209ENST00000512844 GGNBP2Q9H3C7 697 aa9.63□□□□□ -0.87
CHD1-209ENST00000512844 A6NHS1 94 aa9.62□□□□□ -0.87
CHD1-209ENST00000512844 SHISA8B8ZZ34 492 aa9.62□□□□□ -0.87
CHD1-209ENST00000512844 PHACTR2O75167 634 aa9.62□□□□□ -0.87
CHD1-209ENST00000512844 CPB1P15086 417 aa9.62□□□□□ -0.87
CHD1-209ENST00000512844 EIF2AK2P19525 551 aaKnown RBP9.62□□□□□ -0.87
CHD1-209ENST00000512844 XKR5Q6UX68 686 aa9.62□□□□□ -0.87
CHD1-209ENST00000512844 ZSCAN29Q8IWY8 852 aaPredicted RBP9.62□□□□□ -0.87
CHD1-209ENST00000512844 NSUN5Q96P11 429 aaKnown RBP9.62□□□□□ -0.87
CHD1-209ENST00000512844 CES1P23141 567 aa9.61□□□□□ -0.87
CHD1-209ENST00000512844 ELMSAN1Q6PJG2 1045 aa9.61□□□□□ -0.87
CHD1-209ENST00000512844 C1orf229Q6ZS94 237 aaPredicted RBP9.61□□□□□ -0.87
CHD1-209ENST00000512844 SND1Q7KZF4 910 aaKnown RBP eCLIP9.61□□□□□ -0.87
CHD1-209ENST00000512844 NCAPG2Q86XI2 1143 aa9.61□□□□□ -0.87
CHD1-209ENST00000512844 OR13H1Q8NG92 308 aa9.61□□□□□ -0.87
CHD1-209ENST00000512844 TRPM4Q8TD43 1214 aa9.61□□□□□ -0.87
CHD1-209ENST00000512844 DMRTB1Q96MA1 342 aa9.61□□□□□ -0.87
CHD1-209ENST00000512844 TMEM63CQ9P1W3 806 aa9.61□□□□□ -0.87
CHD1-209ENST00000512844 ADAMTS8Q9UP79 889 aa9.61□□□□□ -0.87
CHD1-209ENST00000512844 ARHGEF15O94989 841 aa9.6□□□□□ -0.87
CHD1-209ENST00000512844 SCARF2Q96GP6 870 aaPredicted RBP9.6□□□□□ -0.87
CHD1-209ENST00000512844 GZF1Q9H116 711 aaPredicted RBP9.6□□□□□ -0.87
CHD1-209ENST00000512844 MKL2Q9ULH7 1088 aa9.6□□□□□ -0.87
CHD1-209ENST00000512844 LOC102724428A0A0B4J2F2 783 aa9.59□□□□□ -0.87
CHD1-209ENST00000512844 RNF225M0QZC1 329 aaPredicted RBP9.59□□□□□ -0.87
CHD1-209ENST00000512844 RGS9O75916 674 aaPredicted RBP9.59□□□□□ -0.87
CHD1-209ENST00000512844 SIK1P57059 783 aa9.59□□□□□ -0.87
CHD1-209ENST00000512844 ECM1Q16610 540 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms