RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 PPP1R1BQ9UD71 204 aaPredicted RBP14.32□□□□□ -0.12
COL11A1-210ENST00000512756 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.32□□□□□ -0.12
COL11A1-210ENST00000512756 GSTTP1A0A1W2PQM5 241 aa14.32□□□□□ -0.12
COL11A1-210ENST00000512756 N4BP3O15049 544 aa14.32□□□□□ -0.12
COL11A1-210ENST00000512756 ZBTB43O43298 467 aa14.32□□□□□ -0.12
COL11A1-210ENST00000512756 SMC1AQ14683 1233 aaKnown RBP14.32□□□□□ -0.12
COL11A1-210ENST00000512756 CCDC113Q9H0I3 377 aa14.32□□□□□ -0.12
COL11A1-210ENST00000512756 CNPY2Q9Y2B0 182 aa14.32□□□□□ -0.12
COL11A1-210ENST00000512756 NEBLO76041 1014 aa14.32□□□□□ -0.12
COL11A1-210ENST00000512756 UBASH3AP57075 661 aa14.32□□□□□ -0.12
COL11A1-210ENST00000512756 NOLC1Q14978 699 aaKnown RBP eCLIP14.32□□□□□ -0.12
COL11A1-210ENST00000512756 WTAPQ15007 396 aa14.32□□□□□ -0.12
COL11A1-210ENST00000512756 HS1BP3Q53T59 392 aa14.32□□□□□ -0.12
COL11A1-210ENST00000512756 DDX46Q7L014 1031 aaKnown RBP14.32□□□□□ -0.12
COL11A1-210ENST00000512756 RPGRQ92834 1020 aaKnown RBP14.32□□□□□ -0.12
COL11A1-210ENST00000512756 PHF23Q9BUL5 403 aaPredicted RBP14.32□□□□□ -0.12
COL11A1-210ENST00000512756 GRM8O00222 908 aa14.31□□□□□ -0.12
COL11A1-210ENST00000512756 KSR2Q6VAB6 950 aa14.31□□□□□ -0.12
COL11A1-210ENST00000512756 PANK2Q9BZ23 570 aa14.31□□□□□ -0.12
COL11A1-210ENST00000512756 CHPF2Q9P2E5 772 aa14.31□□□□□ -0.12
COL11A1-210ENST00000512756 DUOX2Q9NRD8 1548 aa14.31□□□□□ -0.12
COL11A1-210ENST00000512756 UGGT2Q9NYU1 1516 aa14.31□□□□□ -0.12
COL11A1-210ENST00000512756 CCDC144CPQ8IYA2 1237 aa14.31□□□□□ -0.12
COL11A1-210ENST00000512756 PIK3C2GO75747 1445 aa14.31□□□□□ -0.12
COL11A1-210ENST00000512756 ANO6Q4KMQ2 910 aa14.31□□□□□ -0.12
COL11A1-210ENST00000512756 SPECC1Q5M775 1068 aa14.31□□□□□ -0.12
COL11A1-210ENST00000512756 C8orf58Q8NAV2 365 aa14.31□□□□□ -0.12
COL11A1-210ENST00000512756 IL15P40933 162 aaPredicted RBP14.31□□□□□ -0.12
COL11A1-210ENST00000512756 RAB3GAP1Q15042 981 aa14.3□□□□□ -0.12
COL11A1-210ENST00000512756 IFI16Q16666 785 aaKnown RBP14.3□□□□□ -0.12
COL11A1-210ENST00000512756 INTS4Q96HW7 963 aaKnown RBP14.3□□□□□ -0.12
COL11A1-210ENST00000512756 ALG1Q9BT22 464 aa14.3□□□□□ -0.12
COL11A1-210ENST00000512756 CRNKL1Q9BZJ0 848 aaKnown RBP14.3□□□□□ -0.12
COL11A1-210ENST00000512756 SKILP12757 684 aa14.3□□□□□ -0.12
COL11A1-210ENST00000512756 HLTFQ14527 1009 aaKnown RBP eCLIP14.3□□□□□ -0.12
COL11A1-210ENST00000512756 ZKSCAN5Q9Y2L8 839 aa14.3□□□□□ -0.12
COL11A1-210ENST00000512756 CTR9Q6PD62 1173 aa14.3□□□□□ -0.12
COL11A1-210ENST00000512756 CKAP4Q07065 602 aaKnown RBP14.3□□□□□ -0.12
COL11A1-210ENST00000512756 ESR2Q92731 530 aa14.29□□□□□ -0.12
COL11A1-210ENST00000512756 TRIM47Q96LD4 638 aa14.29□□□□□ -0.12
COL11A1-210ENST00000512756 PRDM10Q9NQV6 1147 aa14.29□□□□□ -0.12
COL11A1-210ENST00000512756 DACT1Q9NYF0 836 aa14.29□□□□□ -0.12
COL11A1-210ENST00000512756 GOPCQ9HD26 462 aa14.29□□□□□ -0.12
COL11A1-210ENST00000512756 TMCO5BA8MYB1 307 aa14.29□□□□□ -0.12
COL11A1-210ENST00000512756 CCDC186Q7Z3E2 898 aa14.29□□□□□ -0.12
COL11A1-210ENST00000512756 HOOK3Q86VS8 718 aa14.29□□□□□ -0.12
COL11A1-210ENST00000512756 DNA2P51530 1060 aa14.29□□□□□ -0.12
COL11A1-210ENST00000512756 AKAP4Q5JQC9 854 aa14.29□□□□□ -0.12
COL11A1-210ENST00000512756 PTPRKQ15262 1439 aa14.29□□□□□ -0.12
COL11A1-210ENST00000512756 ANXA1P04083 346 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 CYLC1P35663 651 aaPredicted RBP14.28□□□□□ -0.12
COL11A1-210ENST00000512756 TCERG1LQ5VWI1 586 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 SRRTQ9BXP5 876 aaKnown RBP14.28□□□□□ -0.12
COL11A1-210ENST00000512756 GNAQP50148 359 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 GSTO1P78417 241 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 CCDC152Q4G0S7 254 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 ISM2Q6H9L7 571 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 XAGE3Q8WTP9 111 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 ZBTB40Q9NUA8 1239 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 EXOC1Q9NV70 894 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 EIF2AK4Q9P2K8 1649 aaKnown RBP14.28□□□□□ -0.12
COL11A1-210ENST00000512756 SOS1Q07889 1333 aaPredicted RBP14.28□□□□□ -0.12
COL11A1-210ENST00000512756 AKR1B10O60218 316 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 VAMP4O75379 141 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 CCDC172P0C7W6 258 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 ATP2B3Q16720 1220 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 Q6ZUG5 572 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 LINS1Q8NG48 757 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 GIMAP7Q8NHV1 300 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 JADE2Q9NQC1 790 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 CCDC175P0C221 793 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 RTN1Q16799 776 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 TMX1Q9H3N1 280 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 GOLGA6L10A0A0M3HER8 536 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 KRT222Q8N1A0 295 aa14.28□□□□□ -0.12
COL11A1-210ENST00000512756 NPHP3Q7Z494 1330 aa14.27□□□□□ -0.12
COL11A1-210ENST00000512756 CEP85Q6P2H3 762 aa14.27□□□□□ -0.12
COL11A1-210ENST00000512756 COPS6Q7L5N1 327 aa14.27□□□□□ -0.12
COL11A1-210ENST00000512756 RRAGBQ5VZM2 374 aa14.27□□□□□ -0.12
COL11A1-210ENST00000512756 HLA-DOAP06340 250 aa14.27□□□□□ -0.13
COL11A1-210ENST00000512756 GTF2F1P35269 517 aaKnown RBP eCLIP14.27□□□□□ -0.13
COL11A1-210ENST00000512756 NOP2P46087 812 aaKnown RBP14.27□□□□□ -0.13
COL11A1-210ENST00000512756 DNM1Q05193 864 aaKnown RBP14.27□□□□□ -0.13
COL11A1-210ENST00000512756 CTNNBL1Q8WYA6 563 aaPredicted RBP14.27□□□□□ -0.13
COL11A1-210ENST00000512756 BCCIPQ9P287 314 aaKnown RBP eCLIP14.27□□□□□ -0.13
COL11A1-210ENST00000512756 PPIP5K1Q6PFW1 1433 aa14.27□□□□□ -0.13
COL11A1-210ENST00000512756 DCAF8L1A6NGE4 600 aa14.27□□□□□ -0.13
COL11A1-210ENST00000512756 POLKQ9UBT6 870 aa14.27□□□□□ -0.13
COL11A1-210ENST00000512756 RAD50Q92878 1312 aa14.27□□□□□ -0.13
COL11A1-210ENST00000512756 TRAF1Q13077 416 aa14.26□□□□□ -0.13
COL11A1-210ENST00000512756 EIF4A2Q14240 407 aaKnown RBP14.26□□□□□ -0.13
COL11A1-210ENST00000512756 RAB11FIP4Q86YS3 637 aa14.26□□□□□ -0.13
COL11A1-210ENST00000512756 ITSN2Q9NZM3 1697 aa14.26□□□□□ -0.13
COL11A1-210ENST00000512756 PEG3Q9GZU2 1588 aa14.26□□□□□ -0.13
COL11A1-210ENST00000512756 PLCH2O75038 1416 aa14.26□□□□□ -0.13
COL11A1-210ENST00000512756 TUBB4BP68371 445 aa14.26□□□□□ -0.13
COL11A1-210ENST00000512756 ERMNQ8TAM6 284 aa14.26□□□□□ -0.13
COL11A1-210ENST00000512756 ARFGAP3Q9NP61 516 aa14.26□□□□□ -0.13
COL11A1-210ENST00000512756 ZFYVE9O95405 1425 aa14.26□□□□□ -0.13
COL11A1-210ENST00000512756 CTAGE15A4D2H0 777 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms