RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 MFSD6Q6ZSS7 791 aa16.5■□□□□ 0.23
TRIO-218ENST00000512070 CEP83Q9Y592 693 aa16.5■□□□□ 0.23
TRIO-218ENST00000512070 ABCA10Q8WWZ4 1543 aa16.5■□□□□ 0.23
TRIO-218ENST00000512070 PSMA7O14818 248 aa16.49■□□□□ 0.23
TRIO-218ENST00000512070 HLA-DOAP06340 250 aa16.49■□□□□ 0.23
TRIO-218ENST00000512070 MAP7D1Q3KQU3 841 aa16.49■□□□□ 0.23
TRIO-218ENST00000512070 FAM200AQ8TCP9 573 aa16.49■□□□□ 0.23
TRIO-218ENST00000512070 CCDC129Q6ZRS4 1044 aa16.49■□□□□ 0.23
TRIO-218ENST00000512070 CDC5LQ99459 802 aaKnown RBP16.49■□□□□ 0.23
TRIO-218ENST00000512070 IQGAP2Q13576 1575 aa16.49■□□□□ 0.23
TRIO-218ENST00000512070 RANBP6O60518 1105 aaKnown RBP16.49■□□□□ 0.23
TRIO-218ENST00000512070 ATL3Q6DD88 541 aa16.49■□□□□ 0.23
TRIO-218ENST00000512070 CCDC121Q6ZUS5 278 aa16.49■□□□□ 0.23
TRIO-218ENST00000512070 ANKLE2Q86XL3 938 aa16.49■□□□□ 0.23
TRIO-218ENST00000512070 NAP1L3Q99457 506 aaPredicted RBP16.49■□□□□ 0.23
TRIO-218ENST00000512070 ECHDC1Q9NTX5 307 aa16.49■□□□□ 0.23
TRIO-218ENST00000512070 MAP3K1Q13233 1512 aa16.49■□□□□ 0.23
TRIO-218ENST00000512070 RARSP54136 660 aaKnown RBP16.49■□□□□ 0.23
TRIO-218ENST00000512070 TRIM47Q96LD4 638 aa16.49■□□□□ 0.23
TRIO-218ENST00000512070 METAP2P50579 478 aaKnown RBP eCLIP16.49■□□□□ 0.23
TRIO-218ENST00000512070 BICDL1Q6ZP65 573 aa16.49■□□□□ 0.23
TRIO-218ENST00000512070 ANKRD24Q8TF21 1146 aa16.49■□□□□ 0.23
TRIO-218ENST00000512070 SYNCQ9H7C4 482 aa16.49■□□□□ 0.23
TRIO-218ENST00000512070 TMEM87AQ8NBN3 555 aa16.48■□□□□ 0.23
TRIO-218ENST00000512070 SPAG5Q96R06 1193 aa16.48■□□□□ 0.23
TRIO-218ENST00000512070 TMOD3Q9NYL9 352 aa16.48■□□□□ 0.23
TRIO-218ENST00000512070 HDAC9Q9UKV0 1011 aa16.48■□□□□ 0.23
TRIO-218ENST00000512070 MPNDQ8N594 471 aa16.48■□□□□ 0.23
TRIO-218ENST00000512070 PIK3R4Q99570 1358 aa16.48■□□□□ 0.23
TRIO-218ENST00000512070 DDX54Q8TDD1 881 aaKnown RBP16.48■□□□□ 0.23
TRIO-218ENST00000512070 PPP1R2P41236 205 aa16.48■□□□□ 0.23
TRIO-218ENST00000512070 B4GALNT4Q76KP1 1039 aa16.48■□□□□ 0.23
TRIO-218ENST00000512070 IFT74Q96LB3 600 aa16.48■□□□□ 0.23
TRIO-218ENST00000512070 B4DLN1 442 aa16.48■□□□□ 0.23
TRIO-218ENST00000512070 MRPL12P52815 198 aaKnown RBP16.48■□□□□ 0.23
TRIO-218ENST00000512070 IMPG2Q9BZV3 1241 aa16.48■□□□□ 0.23
TRIO-218ENST00000512070 XPCQ01831 940 aaPredicted RBP16.47■□□□□ 0.23
TRIO-218ENST00000512070 KIF5AQ12840 1032 aa16.47■□□□□ 0.23
TRIO-218ENST00000512070 DNAJC21Q5F1R6 531 aaKnown RBP16.47■□□□□ 0.23
TRIO-218ENST00000512070 CKAP2LQ8IYA6 745 aa16.47■□□□□ 0.23
TRIO-218ENST00000512070 CNGA1P29973 690 aa16.47■□□□□ 0.23
TRIO-218ENST00000512070 CLUL1Q15846 466 aa16.47■□□□□ 0.23
TRIO-218ENST00000512070 TMEM67Q5HYA8 995 aa16.47■□□□□ 0.23
TRIO-218ENST00000512070 PRC1O43663 620 aa16.47■□□□□ 0.23
TRIO-218ENST00000512070 GJB2P29033 226 aa16.47■□□□□ 0.23
TRIO-218ENST00000512070 MXRA7P84157 204 aa16.47■□□□□ 0.23
TRIO-218ENST00000512070 RSRC1Q96IZ7 334 aaKnown RBP16.47■□□□□ 0.23
TRIO-218ENST00000512070 CROCCP2Q86T23 111 aa16.47■□□□□ 0.23
TRIO-218ENST00000512070 KAT14Q9H8E8 782 aa16.47■□□□□ 0.23
TRIO-218ENST00000512070 NDC80O14777 642 aa16.47■□□□□ 0.23
TRIO-218ENST00000512070 VAV2P52735 878 aa16.47■□□□□ 0.23
TRIO-218ENST00000512070 SH3BGRP55822 239 aaPredicted RBP16.47■□□□□ 0.23
TRIO-218ENST00000512070 TRMT1Q9NXH9 659 aaKnown RBP16.47■□□□□ 0.23
TRIO-218ENST00000512070 MTRF1LQ9UGC7 380 aaKnown RBP16.47■□□□□ 0.23
TRIO-218ENST00000512070 ZBTB16Q05516 673 aa16.47■□□□□ 0.23
TRIO-218ENST00000512070 KRT13P13646 458 aa16.46■□□□□ 0.23
TRIO-218ENST00000512070 GPATCH11Q8N954 259 aa16.46■□□□□ 0.23
TRIO-218ENST00000512070 BOLA2Q9H3K6 86 aa16.46■□□□□ 0.23
TRIO-218ENST00000512070 CALML3P27482 149 aa16.46■□□□□ 0.23
TRIO-218ENST00000512070 CLCN1P35523 988 aa16.46■□□□□ 0.23
TRIO-218ENST00000512070 STAT6P42226 847 aa16.46■□□□□ 0.23
TRIO-218ENST00000512070 ERCC6LQ2NKX8 1250 aa16.46■□□□□ 0.23
TRIO-218ENST00000512070 CCDC50Q8IVM0 306 aa16.46■□□□□ 0.23
TRIO-218ENST00000512070 GABPB2Q8TAK5 448 aaPredicted RBP16.46■□□□□ 0.23
TRIO-218ENST00000512070 SETDB1Q15047 1291 aa16.46■□□□□ 0.23
TRIO-218ENST00000512070 CFAP65Q6ZU64 1925 aaKnown RBP16.45■□□□□ 0.22
TRIO-218ENST00000512070 GMNNO75496 209 aa16.45■□□□□ 0.22
TRIO-218ENST00000512070 NUTM1Q86Y26 1132 aa16.45■□□□□ 0.22
TRIO-218ENST00000512070 TBC1D2Q9BYX2 928 aa16.45■□□□□ 0.22
TRIO-218ENST00000512070 SNAPC4Q5SXM2 1469 aa16.45■□□□□ 0.22
TRIO-218ENST00000512070 KIF3CO14782 793 aa16.45■□□□□ 0.22
TRIO-218ENST00000512070 IPO4Q8TEX9 1081 aaKnown RBP16.45■□□□□ 0.22
TRIO-218ENST00000512070 OTUD6BQ8N6M0 293 aa16.45■□□□□ 0.22
TRIO-218ENST00000512070 CSRNP2Q9H175 543 aa16.45■□□□□ 0.22
TRIO-218ENST00000512070 RPGRQ92834 1020 aaKnown RBP16.45■□□□□ 0.22
TRIO-218ENST00000512070 NEK1Q96PY6 1258 aa16.45■□□□□ 0.22
TRIO-218ENST00000512070 ZSCAN22P10073 491 aaPredicted RBP16.44■□□□□ 0.22
TRIO-218ENST00000512070 SSH1Q8WYL5 1049 aa16.44■□□□□ 0.22
TRIO-218ENST00000512070 SAMD15Q9P1V8 674 aa16.44■□□□□ 0.22
TRIO-218ENST00000512070 TXNDC16Q9P2K2 825 aa16.44■□□□□ 0.22
TRIO-218ENST00000512070 TBC1D32Q96NH3 1257 aa16.44■□□□□ 0.22
TRIO-218ENST00000512070 UQCRFS1P1P0C7P4 283 aa16.44■□□□□ 0.22
TRIO-218ENST00000512070 C10orf67Q8IYJ2 551 aa16.44■□□□□ 0.22
TRIO-218ENST00000512070 ZSCAN23Q3MJ62 389 aa16.43■□□□□ 0.22
TRIO-218ENST00000512070 CRNKL1Q9BZJ0 848 aaKnown RBP16.43■□□□□ 0.22
TRIO-218ENST00000512070 FAM184BQ9ULE4 1060 aa16.43■□□□□ 0.22
TRIO-218ENST00000512070 ODF2LQ9ULJ1 636 aa16.43■□□□□ 0.22
TRIO-218ENST00000512070 ARHGAP45Q92619 1136 aa16.43■□□□□ 0.22
TRIO-218ENST00000512070 SKILP12757 684 aa16.43■□□□□ 0.22
TRIO-218ENST00000512070 IDEP14735 1019 aa16.43■□□□□ 0.22
TRIO-218ENST00000512070 LACTBP83111 547 aaPredicted RBP16.43■□□□□ 0.22
TRIO-218ENST00000512070 APBB1IPQ7Z5R6 666 aaPredicted RBP16.43■□□□□ 0.22
TRIO-218ENST00000512070 GAS8O95995 478 aa16.43■□□□□ 0.22
TRIO-218ENST00000512070 FAM114A2Q9NRY5 505 aa16.43■□□□□ 0.22
TRIO-218ENST00000512070 USP16Q9Y5T5 823 aa16.43■□□□□ 0.22
TRIO-218ENST00000512070 A0A1B0GUA9 196 aa16.42■□□□□ 0.22
TRIO-218ENST00000512070 SETSIPP0DME0 302 aa16.42■□□□□ 0.22
TRIO-218ENST00000512070 PCF11O94913 1555 aaKnown RBP16.42■□□□□ 0.22
TRIO-218ENST00000512070 GPR161Q8N6U8 529 aaKnown RBP16.42■□□□□ 0.22
TRIO-218ENST00000512070 CABP5Q9NP86 173 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms