RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 C9orf78Q9NZ63 289 aaPredicted RBP10.07□□□□□ -0.8
HTT-209ENST00000512068 USP16Q9Y5T5 823 aa10.07□□□□□ -0.8
HTT-209ENST00000512068 AFDNP55196 1824 aaKnown RBP10.07□□□□□ -0.8
HTT-209ENST00000512068 ADCY9O60503 1353 aa10.06□□□□□ -0.8
HTT-209ENST00000512068 COL9A1P20849 921 aa10.06□□□□□ -0.8
HTT-209ENST00000512068 KIF6Q6ZMV9 814 aa10.06□□□□□ -0.8
HTT-209ENST00000512068 ANKRD13DQ6ZTN6 518 aa10.06□□□□□ -0.8
HTT-209ENST00000512068 COPS6Q7L5N1 327 aa10.06□□□□□ -0.8
HTT-209ENST00000512068 ANKRD44Q8N8A2 993 aa10.06□□□□□ -0.8
HTT-209ENST00000512068 MARCH10Q8NA82 808 aaPredicted RBP10.06□□□□□ -0.8
HTT-209ENST00000512068 TTC13Q8NBP0 860 aa10.06□□□□□ -0.8
HTT-209ENST00000512068 GJD4Q96KN9 370 aaPredicted RBP10.06□□□□□ -0.8
HTT-209ENST00000512068 ASAP1Q9ULH1 1129 aa10.06□□□□□ -0.8
HTT-209ENST00000512068 ZNF330Q9Y3S2 320 aaPredicted RBP10.06□□□□□ -0.8
HTT-209ENST00000512068 TRIM66O15016 1216 aa10.05□□□□□ -0.8
HTT-209ENST00000512068 PRSS12P56730 875 aa10.05□□□□□ -0.8
HTT-209ENST00000512068 BEND3Q5T5X7 828 aa10.05□□□□□ -0.8
HTT-209ENST00000512068 CEP85Q6P2H3 762 aa10.05□□□□□ -0.8
HTT-209ENST00000512068 LINS1Q8NG48 757 aa10.05□□□□□ -0.8
HTT-209ENST00000512068 PDZRN3Q9UPQ7 1066 aa10.05□□□□□ -0.8
HTT-209ENST00000512068 ARFGEF2Q9Y6D5 1785 aa10.05□□□□□ -0.8
HTT-209ENST00000512068 ATRNO75882 1429 aa10.05□□□□□ -0.8
HTT-209ENST00000512068 THSD7AQ9UPZ6 1657 aa10.05□□□□□ -0.8
HTT-209ENST00000512068 GLI3P10071 1580 aa10.05□□□□□ -0.8
HTT-209ENST00000512068 PIP4K2AP48426 406 aaPredicted RBP10.04□□□□□ -0.8
HTT-209ENST00000512068 DNAJC10Q8IXB1 793 aa10.04□□□□□ -0.8
HTT-209ENST00000512068 SMC5Q8IY18 1101 aa10.04□□□□□ -0.8
HTT-209ENST00000512068 PLBD2Q8NHP8 589 aa10.04□□□□□ -0.8
HTT-209ENST00000512068 CCDC102AQ96A19 550 aa10.04□□□□□ -0.8
HTT-209ENST00000512068 ARXQ96QS3 562 aa10.04□□□□□ -0.8
HTT-209ENST00000512068 MYD88Q99836 296 aa10.04□□□□□ -0.8
HTT-209ENST00000512068 METTL22Q9BUU2 404 aaPredicted RBP10.04□□□□□ -0.8
HTT-209ENST00000512068 FAM205CA6NFA0 338 aa10.03□□□□□ -0.8
HTT-209ENST00000512068 ANKRD45Q5TZF3 282 aa10.03□□□□□ -0.8
HTT-209ENST00000512068 ZNF772Q68DY9 489 aaPredicted RBP10.03□□□□□ -0.8
HTT-209ENST00000512068 KCNK17Q96T54 332 aa10.03□□□□□ -0.8
HTT-209ENST00000512068 QTRT2Q9H974 415 aaKnown RBP10.03□□□□□ -0.8
HTT-209ENST00000512068 LRRFIP2Q9Y608 721 aaKnown RBP10.03□□□□□ -0.8
HTT-209ENST00000512068 PALLDQ8WX93 1383 aa10.02□□□□□ -0.8
HTT-209ENST00000512068 GRM8O00222 908 aa10.02□□□□□ -0.81
HTT-209ENST00000512068 A1BGP04217 495 aa10.02□□□□□ -0.81
HTT-209ENST00000512068 ATP6V1AP38606 617 aa10.02□□□□□ -0.81
HTT-209ENST00000512068 PADI6Q6TGC4 694 aa10.02□□□□□ -0.81
HTT-209ENST00000512068 CHD1LQ86WJ1 897 aa10.02□□□□□ -0.81
HTT-209ENST00000512068 ZNF687Q8N1G0 1237 aa10.02□□□□□ -0.81
HTT-209ENST00000512068 USP44Q9H0E7 712 aa10.02□□□□□ -0.81
HTT-209ENST00000512068 ARHGAP33O14559 1287 aa10.01□□□□□ -0.81
HTT-209ENST00000512068 PBX2P40425 430 aa10.01□□□□□ -0.81
HTT-209ENST00000512068 ATP8B2P98198 1209 aa10.01□□□□□ -0.81
HTT-209ENST00000512068 NUCB1Q02818 461 aa10.01□□□□□ -0.81
HTT-209ENST00000512068 CWF19L2Q2TBE0 894 aaKnown RBP10.01□□□□□ -0.81
HTT-209ENST00000512068 HSP90AB3PQ58FF7 597 aa10.01□□□□□ -0.81
HTT-209ENST00000512068 POTEEQ6S8J3 1075 aa10.01□□□□□ -0.81
HTT-209ENST00000512068 LNPKQ9C0E8 428 aa10.01□□□□□ -0.81
HTT-209ENST00000512068 DCTPP1Q9H773 170 aa10.01□□□□□ -0.81
HTT-209ENST00000512068 NHSQ6T4R5 1651 aa10.01□□□□□ -0.81
HTT-209ENST00000512068 TJP1Q07157 1748 aa10.01□□□□□ -0.81
HTT-209ENST00000512068 NUP188Q5SRE5 1749 aa10.01□□□□□ -0.81
HTT-209ENST00000512068 LOC102724428A0A0B4J2F2 783 aa10□□□□□ -0.81
HTT-209ENST00000512068 NEURL1BA8MQ27 555 aa10□□□□□ -0.81
HTT-209ENST00000512068 NBPF26B4DH59 902 aa10□□□□□ -0.81
HTT-209ENST00000512068 SIK1P57059 783 aa10□□□□□ -0.81
HTT-209ENST00000512068 OS9Q13438 667 aaPredicted RBP10□□□□□ -0.81
HTT-209ENST00000512068 FAM161AQ3B820 660 aa10□□□□□ -0.81
HTT-209ENST00000512068 HSP90AB4PQ58FF6 505 aa10□□□□□ -0.81
HTT-209ENST00000512068 NBPF14Q5TI25 921 aa10□□□□□ -0.81
HTT-209ENST00000512068 NBPF10Q6P3W6 841 aaKnown RBP10□□□□□ -0.81
HTT-209ENST00000512068 SEPT12Q8IYM1 358 aa10□□□□□ -0.81
HTT-209ENST00000512068 NBPF15Q8N660 670 aa10□□□□□ -0.81
HTT-209ENST00000512068 HS3ST6Q96QI5 342 aa10□□□□□ -0.81
HTT-209ENST00000512068 BCL11AQ9H165 835 aa10□□□□□ -0.81
HTT-209ENST00000512068 ZBTB3Q9H5J0 574 aa10□□□□□ -0.81
HTT-209ENST00000512068 IBTKQ9P2D0 1353 aaPredicted RBP10□□□□□ -0.81
HTT-209ENST00000512068 BTAF1O14981 1849 aa9.99□□□□□ -0.81
HTT-209ENST00000512068 POTEB3A0JP26 581 aa9.99□□□□□ -0.81
HTT-209ENST00000512068 APBB1O00213 710 aa9.99□□□□□ -0.81
HTT-209ENST00000512068 SRGAP3O43295 1099 aa9.99□□□□□ -0.81
HTT-209ENST00000512068 OATP04181 439 aa9.99□□□□□ -0.81
HTT-209ENST00000512068 CYP19A1P11511 503 aaPredicted RBP9.99□□□□□ -0.81
HTT-209ENST00000512068 GCKRQ14397 625 aa9.99□□□□□ -0.81
HTT-209ENST00000512068 POTEBQ6S5H4 581 aa9.99□□□□□ -0.81
HTT-209ENST00000512068 SKAP1Q86WV1 359 aa9.99□□□□□ -0.81
HTT-209ENST00000512068 SIRT2Q8IXJ6 389 aa9.99□□□□□ -0.81
HTT-209ENST00000512068 CCDC87Q9NVE4 849 aa9.99□□□□□ -0.81
HTT-209ENST00000512068 CWC25Q9NXE8 425 aaPredicted RBP9.99□□□□□ -0.81
HTT-209ENST00000512068 ADGRG1Q9Y653 693 aa9.99□□□□□ -0.81
HTT-209ENST00000512068 CICQ96RK0 1608 aaPredicted RBP9.98□□□□□ -0.81
HTT-209ENST00000512068 A0A087WZG4 1122 aa9.98□□□□□ -0.81
HTT-209ENST00000512068 ATP5J2-PTCD1G3V325 749 aa9.98□□□□□ -0.81
HTT-209ENST00000512068 ONECUT3O60422 494 aaPredicted RBP9.98□□□□□ -0.81
HTT-209ENST00000512068 RAB11FIP3O75154 756 aa9.98□□□□□ -0.81
HTT-209ENST00000512068 NBPF7P0C2Y1 421 aaPredicted RBP9.98□□□□□ -0.81
HTT-209ENST00000512068 HMGB2P26583 209 aaKnown RBP9.98□□□□□ -0.81
HTT-209ENST00000512068 IL6STP40189 918 aaPredicted RBP9.98□□□□□ -0.81
HTT-209ENST00000512068 PSEN2P49810 448 aa9.98□□□□□ -0.81
HTT-209ENST00000512068 PDE4DQ08499 809 aa9.98□□□□□ -0.81
HTT-209ENST00000512068 AMHR2Q16671 573 aa9.98□□□□□ -0.81
HTT-209ENST00000512068 TTLL7Q6ZT98 887 aa9.98□□□□□ -0.81
HTT-209ENST00000512068 LRP10Q7Z4F1 713 aa9.98□□□□□ -0.81
HTT-209ENST00000512068 PPP1R42Q7Z4L9 355 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms