RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 POTEIP0CG38 1075 aa24.72■■□□□ 1.55
SMAD1-211ENST00000512019 POTEJP0CG39 1038 aa24.72■■□□□ 1.55
SMAD1-211ENST00000512019 CCT4P50991 539 aaKnown RBP24.72■■□□□ 1.55
SMAD1-211ENST00000512019 BEND3Q5T5X7 828 aa24.72■■□□□ 1.55
SMAD1-211ENST00000512019 CCDC191Q8NCU4 936 aa24.72■■□□□ 1.55
SMAD1-211ENST00000512019 SRCIN1Q9C0H9 1055 aa24.72■■□□□ 1.55
SMAD1-211ENST00000512019 IBTKQ9P2D0 1353 aaPredicted RBP24.71■■□□□ 1.55
SMAD1-211ENST00000512019 UBN2Q6ZU65 1347 aa24.71■■□□□ 1.55
SMAD1-211ENST00000512019 PLIN1O60240 522 aa24.71■■□□□ 1.55
SMAD1-211ENST00000512019 IGKV5-2P06315 115 aa24.71■■□□□ 1.55
SMAD1-211ENST00000512019 NLRP10Q86W26 655 aa24.71■■□□□ 1.55
SMAD1-211ENST00000512019 CLUAP1Q96AJ1 413 aa24.71■■□□□ 1.55
SMAD1-211ENST00000512019 NEURL1BA8MQ27 555 aa24.7■■□□□ 1.54
SMAD1-211ENST00000512019 ALDH1L1O75891 902 aa24.7■■□□□ 1.54
SMAD1-211ENST00000512019 PPP1R42Q7Z4L9 355 aa24.7■■□□□ 1.54
SMAD1-211ENST00000512019 NUTM1Q86Y26 1132 aa24.7■■□□□ 1.54
SMAD1-211ENST00000512019 CWC25Q9NXE8 425 aaPredicted RBP24.7■■□□□ 1.54
SMAD1-211ENST00000512019 GTF2E1P29083 439 aaPredicted RBP24.69■■□□□ 1.54
SMAD1-211ENST00000512019 FKBP4Q02790 459 aaKnown RBP eCLIP24.69■■□□□ 1.54
SMAD1-211ENST00000512019 CWF19L2Q2TBE0 894 aaKnown RBP24.69■■□□□ 1.54
SMAD1-211ENST00000512019 NYXQ9GZU5 481 aa24.69■■□□□ 1.54
SMAD1-211ENST00000512019 ZNF277Q9NRM2 450 aaPredicted RBP24.69■■□□□ 1.54
SMAD1-211ENST00000512019 RNF123Q5XPI4 1314 aa24.68■■□□□ 1.54
SMAD1-211ENST00000512019 PDE3AQ14432 1141 aa24.68■■□□□ 1.54
SMAD1-211ENST00000512019 INTS3Q68E01 1043 aaKnown RBP24.68■■□□□ 1.54
SMAD1-211ENST00000512019 TNNQ9UQP3 1299 aa24.68■■□□□ 1.54
SMAD1-211ENST00000512019 SUPT16HQ9Y5B9 1047 aaKnown RBP24.68■■□□□ 1.54
SMAD1-211ENST00000512019 ZNF541Q9H0D2 1346 aa24.67■■□□□ 1.54
SMAD1-211ENST00000512019 UTP14AQ9BVJ6 771 aaKnown RBP24.67■■□□□ 1.54
SMAD1-211ENST00000512019 GCKRQ14397 625 aa24.66■■□□□ 1.54
SMAD1-211ENST00000512019 SUSD4Q5VX71 490 aa24.66■■□□□ 1.54
SMAD1-211ENST00000512019 CHADLQ6NUI6 762 aa24.66■■□□□ 1.54
SMAD1-211ENST00000512019 SNED1Q8TER0 1413 aa24.66■■□□□ 1.54
SMAD1-211ENST00000512019 NTSR2O95665 410 aa24.65■■□□□ 1.54
SMAD1-211ENST00000512019 ALDH1B1P30837 517 aa24.65■■□□□ 1.54
SMAD1-211ENST00000512019 COL13A1Q5TAT6 717 aaPredicted RBP24.65■■□□□ 1.54
SMAD1-211ENST00000512019 TMEM57Q8N5G2 664 aa24.65■■□□□ 1.54
SMAD1-211ENST00000512019 PANK1Q8TE04 598 aa24.65■■□□□ 1.54
SMAD1-211ENST00000512019 TRMT112Q9UI30 125 aaKnown RBP24.65■■□□□ 1.54
SMAD1-211ENST00000512019 PCNTO95613 3336 aa24.65■■□□□ 1.54
SMAD1-211ENST00000512019 RLBP1P12271 317 aa24.64■■□□□ 1.54
SMAD1-211ENST00000512019 CRY2Q49AN0 593 aa24.64■■□□□ 1.54
SMAD1-211ENST00000512019 SLC51AQ86UW1 340 aa24.64■■□□□ 1.54
SMAD1-211ENST00000512019 ITPRIPQ8IWB1 547 aa24.64■■□□□ 1.54
SMAD1-211ENST00000512019 COL4A5P29400 1685 aa24.63■■□□□ 1.53
SMAD1-211ENST00000512019 RTKN2Q8IZC4 609 aa24.63■■□□□ 1.53
SMAD1-211ENST00000512019 SYNE4Q8N205 404 aa24.63■■□□□ 1.53
SMAD1-211ENST00000512019 ZBTB38Q8NAP3 1195 aaPredicted RBP24.63■■□□□ 1.53
SMAD1-211ENST00000512019 L3MBTL3Q96JM7 780 aaPredicted RBP24.63■■□□□ 1.53
SMAD1-211ENST00000512019 C9orf78Q9NZ63 289 aaPredicted RBP24.63■■□□□ 1.53
SMAD1-211ENST00000512019 SH3TC1Q8TE82 1336 aa24.62■■□□□ 1.53
SMAD1-211ENST00000512019 ADAMTSL1Q8N6G6 1762 aa24.62■■□□□ 1.53
SMAD1-211ENST00000512019 GRM8O00222 908 aa24.62■■□□□ 1.53
SMAD1-211ENST00000512019 PCCAP05165 728 aaPredicted RBP24.62■■□□□ 1.53
SMAD1-211ENST00000512019 IARSP41252 1262 aaKnown RBP24.62■■□□□ 1.53
SMAD1-211ENST00000512019 TAF1DQ9H5J8 278 aaPredicted RBP24.62■■□□□ 1.53
SMAD1-211ENST00000512019 LAMB2P55268 1798 aa24.62■■□□□ 1.53
SMAD1-211ENST00000512019 RIC1Q4ADV7 1423 aa24.61■■□□□ 1.53
SMAD1-211ENST00000512019 IQCA1LA6NCM1 817 aa24.6■■□□□ 1.53
SMAD1-211ENST00000512019 HSP90B1P14625 803 aaKnown RBP24.6■■□□□ 1.53
SMAD1-211ENST00000512019 MVPQ14764 893 aaKnown RBP24.6■■□□□ 1.53
SMAD1-211ENST00000512019 C20orf194Q5TEA3 1177 aa24.6■■□□□ 1.53
SMAD1-211ENST00000512019 HSPA1AP0DMV8 641 aaKnown RBP24.59■■□□□ 1.53
SMAD1-211ENST00000512019 HSPA1BP0DMV9 641 aaKnown RBP24.59■■□□□ 1.53
SMAD1-211ENST00000512019 C3orf67Q6ZVT6 689 aa24.59■■□□□ 1.53
SMAD1-211ENST00000512019 UBE3BQ7Z3V4 1068 aa24.59■■□□□ 1.53
SMAD1-211ENST00000512019 FAM89AQ96GI7 184 aa24.59■■□□□ 1.53
SMAD1-211ENST00000512019 CDHR2Q9BYE9 1310 aa24.59■■□□□ 1.53
SMAD1-211ENST00000512019 H7C1W4 665 aa24.58■■□□□ 1.53
SMAD1-211ENST00000512019 LDHDQ86WU2 507 aa24.58■■□□□ 1.53
SMAD1-211ENST00000512019 RPGRQ92834 1020 aaKnown RBP24.58■■□□□ 1.53
SMAD1-211ENST00000512019 DDX19BQ9UMR2 479 aa24.58■■□□□ 1.53
SMAD1-211ENST00000512019 COG6Q9Y2V7 657 aa24.58■■□□□ 1.53
SMAD1-211ENST00000512019 UTYO14607 1347 aa24.58■■□□□ 1.52
SMAD1-211ENST00000512019 LTBP1Q14766 1721 aa24.58■■□□□ 1.52
SMAD1-211ENST00000512019 FZD9O00144 591 aa24.57■■□□□ 1.52
SMAD1-211ENST00000512019 HOXA10P31260 410 aaPredicted RBP24.57■■□□□ 1.52
SMAD1-211ENST00000512019 PSMD1Q99460 953 aa24.57■■□□□ 1.52
SMAD1-211ENST00000512019 USP44Q9H0E7 712 aa24.57■■□□□ 1.52
SMAD1-211ENST00000512019 CHMP4BQ9H444 224 aaKnown RBP24.57■■□□□ 1.52
SMAD1-211ENST00000512019 CREBZFQ9NS37 354 aa24.57■■□□□ 1.52
SMAD1-211ENST00000512019 MKRN1Q9UHC7 482 aaKnown RBP24.57■■□□□ 1.52
SMAD1-211ENST00000512019 PASKQ96RG2 1323 aa24.57■■□□□ 1.52
SMAD1-211ENST00000512019 IRS4O14654 1257 aaPredicted RBP24.56■■□□□ 1.52
SMAD1-211ENST00000512019 GNAI3P08754 354 aa24.56■■□□□ 1.52
SMAD1-211ENST00000512019 EAPPQ56P03 285 aaPredicted RBP24.56■■□□□ 1.52
SMAD1-211ENST00000512019 RTL5Q5HYW3 569 aaPredicted RBP24.56■■□□□ 1.52
SMAD1-211ENST00000512019 HACL1Q9UJ83 578 aa24.56■■□□□ 1.52
SMAD1-211ENST00000512019 HDAC5Q9UQL6 1122 aa24.56■■□□□ 1.52
SMAD1-211ENST00000512019 UBTFL1P0CB47 393 aaPredicted RBP24.55■■□□□ 1.52
SMAD1-211ENST00000512019 TAF1P21675 1872 aa24.55■■□□□ 1.52
SMAD1-211ENST00000512019 NBPF7P0C2Y1 421 aaPredicted RBP24.54■■□□□ 1.52
SMAD1-211ENST00000512019 EPHX2P34913 555 aa24.54■■□□□ 1.52
SMAD1-211ENST00000512019 CASP7P55210 303 aa24.54■■□□□ 1.52
SMAD1-211ENST00000512019 SLC10A5Q5PT55 438 aa24.54■■□□□ 1.52
SMAD1-211ENST00000512019 JARID2Q92833 1246 aaPredicted RBP24.54■■□□□ 1.52
SMAD1-211ENST00000512019 MEIS3Q99687 375 aa24.54■■□□□ 1.52
SMAD1-211ENST00000512019 DDX60Q8IY21 1712 aaKnown RBP24.54■■□□□ 1.52
SMAD1-211ENST00000512019 ITGBL1O95965 494 aaPredicted RBP24.53■■□□□ 1.52
SMAD1-211ENST00000512019 RBM17Q96I25 401 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms