RNA–Protein interactions for RNA: ENST00000511905.5

SPOCK3-219, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,700 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-219ENST00000511905 FOXD4L5Q5VV16 416 aaPredicted RBP24.67■■□□□ 1.54
SPOCK3-219ENST00000511905 USP48Q86UV5 1035 aa24.67■■□□□ 1.54
SPOCK3-219ENST00000511905 FOXD4L4Q8WXT5 416 aaPredicted RBP24.67■■□□□ 1.54
SPOCK3-219ENST00000511905 RBM27Q9P2N5 1060 aaKnown RBP24.67■■□□□ 1.54
SPOCK3-219ENST00000511905 BLOC1S2Q6QNY1 142 aa24.66■■□□□ 1.54
SPOCK3-219ENST00000511905 FBXO3Q9UK99 471 aa24.66■■□□□ 1.54
SPOCK3-219ENST00000511905 NSFL1CQ9UNZ2 370 aaKnown RBP24.66■■□□□ 1.54
SPOCK3-219ENST00000511905 RPS6KB1P23443 525 aa24.66■■□□□ 1.54
SPOCK3-219ENST00000511905 IL15P40933 162 aaPredicted RBP24.66■■□□□ 1.54
SPOCK3-219ENST00000511905 SLAIN2Q9P270 581 aa24.66■■□□□ 1.54
SPOCK3-219ENST00000511905 U3KPZ7 1027 aaPredicted RBP24.66■■□□□ 1.54
SPOCK3-219ENST00000511905 SHANK3Q9BYB0 1731 aa24.66■■□□□ 1.54
SPOCK3-219ENST00000511905 ATP5J2-PTCD1G3V325 749 aa24.65■■□□□ 1.54
SPOCK3-219ENST00000511905 PTCD1O75127 700 aaKnown RBP24.65■■□□□ 1.54
SPOCK3-219ENST00000511905 CIAO1O76071 339 aa24.65■■□□□ 1.54
SPOCK3-219ENST00000511905 PDCP20941 246 aa24.65■■□□□ 1.54
SPOCK3-219ENST00000511905 LMBR1LQ6UX01 489 aa24.65■■□□□ 1.54
SPOCK3-219ENST00000511905 TJP1Q07157 1748 aa24.65■■□□□ 1.54
SPOCK3-219ENST00000511905 PALLDQ8WX93 1383 aa24.65■■□□□ 1.54
SPOCK3-219ENST00000511905 GJB2P29033 226 aa24.64■■□□□ 1.54
SPOCK3-219ENST00000511905 UBE2HP62256 183 aa24.64■■□□□ 1.54
SPOCK3-219ENST00000511905 TRIM28Q13263 835 aaKnown RBP24.64■■□□□ 1.54
SPOCK3-219ENST00000511905 ME3Q16798 604 aa24.64■■□□□ 1.54
SPOCK3-219ENST00000511905 TEX13AQ9BXU3 409 aaPredicted RBP24.64■■□□□ 1.54
SPOCK3-219ENST00000511905 SH3TC1Q8TE82 1336 aa24.64■■□□□ 1.53
SPOCK3-219ENST00000511905 LARGE1O95461 756 aa24.64■■□□□ 1.53
SPOCK3-219ENST00000511905 CCDC83Q8IWF9 413 aa24.64■■□□□ 1.53
SPOCK3-219ENST00000511905 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.64■■□□□ 1.53
SPOCK3-219ENST00000511905 CHAMP1Q96JM3 812 aa24.64■■□□□ 1.53
SPOCK3-219ENST00000511905 MTMR6Q9Y217 621 aa24.64■■□□□ 1.53
SPOCK3-219ENST00000511905 SYCE3A1L190 88 aa24.63■■□□□ 1.53
SPOCK3-219ENST00000511905 CPA1P15085 419 aa24.63■■□□□ 1.53
SPOCK3-219ENST00000511905 VSIG10Q8N0Z9 540 aa24.63■■□□□ 1.53
SPOCK3-219ENST00000511905 KBTBD3Q8NAB2 608 aa24.63■■□□□ 1.53
SPOCK3-219ENST00000511905 SPEF2Q9C093 1822 aa24.63■■□□□ 1.53
SPOCK3-219ENST00000511905 PIP4K2AP48426 406 aaPredicted RBP24.62■■□□□ 1.53
SPOCK3-219ENST00000511905 MCMDC2Q4G0Z9 681 aa24.62■■□□□ 1.53
SPOCK3-219ENST00000511905 ATG9AQ7Z3C6 839 aa24.62■■□□□ 1.53
SPOCK3-219ENST00000511905 ST3GAL1Q11201 340 aa24.61■■□□□ 1.53
SPOCK3-219ENST00000511905 FAM184AQ8NB25 1140 aa24.61■■□□□ 1.53
SPOCK3-219ENST00000511905 DBNDD2Q9BQY9 259 aa24.61■■□□□ 1.53
SPOCK3-219ENST00000511905 TSPY26PQ9H489 355 aa24.61■■□□□ 1.53
SPOCK3-219ENST00000511905 TPCN1Q9ULQ1 816 aa24.61■■□□□ 1.53
SPOCK3-219ENST00000511905 CCDC183Q5T5S1 534 aa24.61■■□□□ 1.53
SPOCK3-219ENST00000511905 TTLL7Q6ZT98 887 aa24.61■■□□□ 1.53
SPOCK3-219ENST00000511905 ZNF589Q86UQ0 364 aaPredicted RBP24.61■■□□□ 1.53
SPOCK3-219ENST00000511905 ISCA1Q9BUE6 129 aa24.61■■□□□ 1.53
SPOCK3-219ENST00000511905 HELLSQ9NRZ9 838 aa24.61■■□□□ 1.53
SPOCK3-219ENST00000511905 UVSSAQ2YD98 709 aa24.6■■□□□ 1.53
SPOCK3-219ENST00000511905 STRCQ7RTU9 1775 aa24.6■■□□□ 1.53
SPOCK3-219ENST00000511905 EYA2O00167 538 aa24.59■■□□□ 1.53
SPOCK3-219ENST00000511905 ZSCAN30Q86W11 494 aa24.59■■□□□ 1.53
SPOCK3-219ENST00000511905 GADD45BO75293 160 aaPredicted RBP24.58■■□□□ 1.53
SPOCK3-219ENST00000511905 HSPA2P54652 639 aa24.58■■□□□ 1.53
SPOCK3-219ENST00000511905 NHSL1Q5SYE7 1610 aa24.58■■□□□ 1.53
SPOCK3-219ENST00000511905 ZNF609O15014 1411 aa24.58■■□□□ 1.53
SPOCK3-219ENST00000511905 A1BGP04217 495 aa24.58■■□□□ 1.52
SPOCK3-219ENST00000511905 HMGB1P09429 215 aaKnown RBP24.58■■□□□ 1.52
SPOCK3-219ENST00000511905 JARID2Q92833 1246 aaPredicted RBP24.58■■□□□ 1.52
SPOCK3-219ENST00000511905 PLA2G12BQ9BX93 195 aa24.58■■□□□ 1.52
SPOCK3-219ENST00000511905 CNPY2Q9Y2B0 182 aa24.58■■□□□ 1.52
SPOCK3-219ENST00000511905 TOB2Q14106 344 aaPredicted RBP24.57■■□□□ 1.52
SPOCK3-219ENST00000511905 TCIRG1Q13488 830 aa24.56■■□□□ 1.52
SPOCK3-219ENST00000511905 NEK1Q96PY6 1258 aa24.56■■□□□ 1.52
SPOCK3-219ENST00000511905 DSCC1Q9BVC3 393 aa24.56■■□□□ 1.52
SPOCK3-219ENST00000511905 LARP6Q9BRS8 491 aaKnown RBP24.55■■□□□ 1.52
SPOCK3-219ENST00000511905 ELP1O95163 1332 aa24.55■■□□□ 1.52
SPOCK3-219ENST00000511905 MCM5P33992 734 aa24.55■■□□□ 1.52
SPOCK3-219ENST00000511905 LARP1BQ659C4 914 aaKnown RBP24.55■■□□□ 1.52
SPOCK3-219ENST00000511905 LRRFIP1Q32MZ4 808 aaKnown RBP24.54■■□□□ 1.52
SPOCK3-219ENST00000511905 EDC3Q96F86 508 aaKnown RBP24.54■■□□□ 1.52
SPOCK3-219ENST00000511905 PAG1Q9NWQ8 432 aa24.54■■□□□ 1.52
SPOCK3-219ENST00000511905 ABCC12Q96J65 1359 aa24.54■■□□□ 1.52
SPOCK3-219ENST00000511905 TOGARAM1Q9Y4F4 1720 aa24.54■■□□□ 1.52
SPOCK3-219ENST00000511905 EVA1CP58658 441 aa24.53■■□□□ 1.52
SPOCK3-219ENST00000511905 DNAJC2Q99543 621 aaKnown RBP24.53■■□□□ 1.52
SPOCK3-219ENST00000511905 GDPD2Q9HCC8 539 aa24.53■■□□□ 1.52
SPOCK3-219ENST00000511905 TMOD3Q9NYL9 352 aa24.53■■□□□ 1.52
SPOCK3-219ENST00000511905 TCHHQ07283 1943 aa24.53■■□□□ 1.52
SPOCK3-219ENST00000511905 PCCAP05165 728 aaPredicted RBP24.52■■□□□ 1.52
SPOCK3-219ENST00000511905 ZMYM1Q5SVZ6 1142 aa24.52■■□□□ 1.52
SPOCK3-219ENST00000511905 DNAJC5Q9H3Z4 198 aa24.52■■□□□ 1.52
SPOCK3-219ENST00000511905 AKAP2Q9Y2D5 859 aa24.52■■□□□ 1.52
SPOCK3-219ENST00000511905 NECAB1Q8N987 351 aa24.52■■□□□ 1.52
SPOCK3-219ENST00000511905 CHMP4CQ96CF2 233 aa24.52■■□□□ 1.52
SPOCK3-219ENST00000511905 NOL7Q9UMY1 257 aaKnown RBP24.52■■□□□ 1.52
SPOCK3-219ENST00000511905 DDX54Q8TDD1 881 aaKnown RBP24.51■■□□□ 1.51
SPOCK3-219ENST00000511905 LLPHQ9BRT6 129 aaKnown RBP24.51■■□□□ 1.51
SPOCK3-219ENST00000511905 CHMP3Q9Y3E7 222 aa24.51■■□□□ 1.51
SPOCK3-219ENST00000511905 LRP6O75581 1613 aa24.51■■□□□ 1.51
SPOCK3-219ENST00000511905 KRT85P78386 507 aa24.5■■□□□ 1.51
SPOCK3-219ENST00000511905 GTF3C6Q969F1 213 aa24.5■■□□□ 1.51
SPOCK3-219ENST00000511905 ZBTB3Q9H5J0 574 aa24.5■■□□□ 1.51
SPOCK3-219ENST00000511905 CDHR2Q9BYE9 1310 aa24.5■■□□□ 1.51
SPOCK3-219ENST00000511905 CSF1RP07333 972 aa24.49■■□□□ 1.51
SPOCK3-219ENST00000511905 CEP126Q9P2H0 1117 aa24.49■■□□□ 1.51
SPOCK3-219ENST00000511905 CYP21A2P08686 494 aa24.49■■□□□ 1.51
SPOCK3-219ENST00000511905 DNM1Q05193 864 aaKnown RBP24.49■■□□□ 1.51
SPOCK3-219ENST00000511905 DDX46Q7L014 1031 aaKnown RBP24.49■■□□□ 1.51
SPOCK3-219ENST00000511905 NEUROD6Q96NK8 337 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms