RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 GJD3Q8N144 294 aa6.64□□□□□ -1.35
CALCOCO2-220ENST00000511816 ALKBH8Q96BT7 664 aaKnown RBP6.64□□□□□ -1.35
CALCOCO2-220ENST00000511816 PNMA5Q96PV4 448 aa6.64□□□□□ -1.35
CALCOCO2-220ENST00000511816 FAM129BQ96TA1 746 aa6.64□□□□□ -1.35
CALCOCO2-220ENST00000511816 BCL2L13Q9BXK5 485 aa6.64□□□□□ -1.35
CALCOCO2-220ENST00000511816 AVENQ9NQS1 362 aaPredicted RBP6.64□□□□□ -1.35
CALCOCO2-220ENST00000511816 LRRC4BQ9NT99 713 aa6.64□□□□□ -1.35
CALCOCO2-220ENST00000511816 KCNH4Q9UQ05 1017 aa6.64□□□□□ -1.35
CALCOCO2-220ENST00000511816 LOC100996750A0A140TA64 210 aa6.63□□□□□ -1.35
CALCOCO2-220ENST00000511816 UBAP1LF5GYI3 381 aa6.63□□□□□ -1.35
CALCOCO2-220ENST00000511816 OPLAHO14841 1288 aa6.63□□□□□ -1.35
CALCOCO2-220ENST00000511816 EFSO43281 561 aa6.63□□□□□ -1.35
CALCOCO2-220ENST00000511816 AMPD1P23109 780 aa6.63□□□□□ -1.35
CALCOCO2-220ENST00000511816 KCNQ4P56696 695 aa6.63□□□□□ -1.35
CALCOCO2-220ENST00000511816 NPM2Q86SE8 214 aaKnown RBP6.63□□□□□ -1.35
CALCOCO2-220ENST00000511816 KLRG1Q96E93 195 aa6.63□□□□□ -1.35
CALCOCO2-220ENST00000511816 KRTAP4-6Q9BYQ5 205 aa6.63□□□□□ -1.35
CALCOCO2-220ENST00000511816 RNF225M0QZC1 329 aaPredicted RBP6.62□□□□□ -1.35
CALCOCO2-220ENST00000511816 TREHO43280 583 aa6.62□□□□□ -1.35
CALCOCO2-220ENST00000511816 XYLBO75191 536 aa6.62□□□□□ -1.35
CALCOCO2-220ENST00000511816 ALAS2P22557 587 aa6.62□□□□□ -1.35
CALCOCO2-220ENST00000511816 CTBSQ01459 385 aa6.62□□□□□ -1.35
CALCOCO2-220ENST00000511816 FAM26DQ5JW98 314 aa6.62□□□□□ -1.35
CALCOCO2-220ENST00000511816 XKR5Q6UX68 686 aa6.62□□□□□ -1.35
CALCOCO2-220ENST00000511816 ZNF438Q7Z4V0 828 aa6.62□□□□□ -1.35
CALCOCO2-220ENST00000511816 PODNQ7Z5L7 613 aa6.62□□□□□ -1.35
CALCOCO2-220ENST00000511816 FOXD4L4Q8WXT5 416 aaPredicted RBP6.62□□□□□ -1.35
CALCOCO2-220ENST00000511816 PMEPA1Q969W9 287 aa6.62□□□□□ -1.35
CALCOCO2-220ENST00000511816 PIK3R2O00459 728 aa6.61□□□□□ -1.35
CALCOCO2-220ENST00000511816 EGFRP00533 1210 aa6.61□□□□□ -1.35
CALCOCO2-220ENST00000511816 CELA2BP08218 269 aaPredicted RBP6.61□□□□□ -1.35
CALCOCO2-220ENST00000511816 RANGAP1P46060 587 aaPredicted RBP6.61□□□□□ -1.35
CALCOCO2-220ENST00000511816 SPEM2Q0P670 501 aa6.61□□□□□ -1.35
CALCOCO2-220ENST00000511816 CCINQ13939 588 aa6.61□□□□□ -1.35
CALCOCO2-220ENST00000511816 ZNF468Q5VIY5 522 aaPredicted RBP6.61□□□□□ -1.35
CALCOCO2-220ENST00000511816 ZNF385CQ66K41 422 aaPredicted RBP6.61□□□□□ -1.35
CALCOCO2-220ENST00000511816 SLCO4C1Q6ZQN7 724 aa6.61□□□□□ -1.35
CALCOCO2-220ENST00000511816 NPAS4Q8IUM7 802 aa6.61□□□□□ -1.35
CALCOCO2-220ENST00000511816 NIF3L1Q9GZT8 377 aa6.61□□□□□ -1.35
CALCOCO2-220ENST00000511816 DNAJC25Q9H1X3 360 aa6.61□□□□□ -1.35
CALCOCO2-220ENST00000511816 GGA1Q9UJY5 639 aa6.61□□□□□ -1.35
CALCOCO2-220ENST00000511816 RBM47A0AV96 593 aaKnown RBP6.6□□□□□ -1.35
CALCOCO2-220ENST00000511816 MAPK8P45983 427 aa6.6□□□□□ -1.35
CALCOCO2-220ENST00000511816 SFSWAPQ12872 951 aaKnown RBP6.6□□□□□ -1.35
CALCOCO2-220ENST00000511816 TTC39BQ5VTQ0 682 aaPredicted RBP6.6□□□□□ -1.35
CALCOCO2-220ENST00000511816 LYPD4Q6UWN0 246 aa6.6□□□□□ -1.35
CALCOCO2-220ENST00000511816 NLRP13Q86W25 1043 aa6.6□□□□□ -1.35
CALCOCO2-220ENST00000511816 GALNT6Q8NCL4 622 aa6.6□□□□□ -1.35
CALCOCO2-220ENST00000511816 ACDQ96AP0 544 aa6.6□□□□□ -1.35
CALCOCO2-220ENST00000511816 RRAGCQ9HB90 399 aa6.6□□□□□ -1.35
CALCOCO2-220ENST00000511816 NEURL1BA8MQ27 555 aa6.59□□□□□ -1.35
CALCOCO2-220ENST00000511816 OIP5O43482 229 aa6.59□□□□□ -1.35
CALCOCO2-220ENST00000511816 RBM25P49756 843 aaKnown RBP6.59□□□□□ -1.35
CALCOCO2-220ENST00000511816 FMR1Q06787 632 aaKnown RBP eCLIP6.59□□□□□ -1.35
CALCOCO2-220ENST00000511816 ALG1LQ6GMV1 187 aa6.59□□□□□ -1.35
CALCOCO2-220ENST00000511816 SYT9Q86SS6 491 aa6.59□□□□□ -1.35
CALCOCO2-220ENST00000511816 SNX29Q8TEQ0 813 aa6.59□□□□□ -1.35
CALCOCO2-220ENST00000511816 GIPC2Q8TF65 315 aa6.59□□□□□ -1.35
CALCOCO2-220ENST00000511816 EDARADDQ8WWZ3 215 aa6.59□□□□□ -1.35
CALCOCO2-220ENST00000511816 SCARF2Q96GP6 870 aaPredicted RBP6.59□□□□□ -1.35
CALCOCO2-220ENST00000511816 GGNBP2Q9H3C7 697 aa6.59□□□□□ -1.35
CALCOCO2-220ENST00000511816 ELP3Q9H9T3 547 aa6.59□□□□□ -1.35
CALCOCO2-220ENST00000511816 KCNMB2Q9Y691 235 aa6.59□□□□□ -1.35
CALCOCO2-220ENST00000511816 E9PSI1 815 aa6.58□□□□□ -1.36
CALCOCO2-220ENST00000511816 CPNE3O75131 537 aaKnown RBP6.58□□□□□ -1.36
CALCOCO2-220ENST00000511816 PHACTR2O75167 634 aa6.58□□□□□ -1.36
CALCOCO2-220ENST00000511816 SIN3BO75182 1162 aa6.58□□□□□ -1.36
CALCOCO2-220ENST00000511816 PCBP4P57723 403 aaKnown RBP6.58□□□□□ -1.36
CALCOCO2-220ENST00000511816 XPCQ01831 940 aaPredicted RBP6.58□□□□□ -1.36
CALCOCO2-220ENST00000511816 DSC3Q14574 896 aa6.58□□□□□ -1.36
CALCOCO2-220ENST00000511816 PCSK7Q16549 785 aa6.58□□□□□ -1.36
CALCOCO2-220ENST00000511816 BHMTQ93088 406 aa6.58□□□□□ -1.36
CALCOCO2-220ENST00000511816 STRN4Q9NRL3 753 aa6.58□□□□□ -1.36
CALCOCO2-220ENST00000511816 ABI2Q9NYB9 513 aaPredicted RBP6.58□□□□□ -1.36
CALCOCO2-220ENST00000511816 PHF20L1A8MW92 1017 aa6.57□□□□□ -1.36
CALCOCO2-220ENST00000511816 C2CD2LO14523 706 aa6.57□□□□□ -1.36
CALCOCO2-220ENST00000511816 GPR182O15218 404 aa6.57□□□□□ -1.36
CALCOCO2-220ENST00000511816 LDHBP07195 334 aaKnown RBP6.57□□□□□ -1.36
CALCOCO2-220ENST00000511816 TBC1D8BQ0IIM8 1120 aa6.57□□□□□ -1.36
CALCOCO2-220ENST00000511816 FBF1Q8TES7 1133 aa6.57□□□□□ -1.36
CALCOCO2-220ENST00000511816 WHAMMQ8TF30 809 aa6.57□□□□□ -1.36
CALCOCO2-220ENST00000511816 CSRNP1Q96S65 589 aa6.57□□□□□ -1.36
CALCOCO2-220ENST00000511816 UBE2OQ9C0C9 1292 aaKnown RBP6.57□□□□□ -1.36
CALCOCO2-220ENST00000511816 USP20Q9Y2K6 914 aa6.57□□□□□ -1.36
CALCOCO2-220ENST00000511816 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.57□□□□□ -1.36
CALCOCO2-220ENST00000511816 TNFRSF21O75509 655 aa6.56□□□□□ -1.36
CALCOCO2-220ENST00000511816 P4HBP07237 508 aaKnown RBP6.56□□□□□ -1.36
CALCOCO2-220ENST00000511816 PSAPP07602 524 aa6.56□□□□□ -1.36
CALCOCO2-220ENST00000511816 RARAP10276 462 aa6.56□□□□□ -1.36
CALCOCO2-220ENST00000511816 EPXP11678 715 aa6.56□□□□□ -1.36
CALCOCO2-220ENST00000511816 BEND7Q8N7W2 519 aaPredicted RBP6.56□□□□□ -1.36
CALCOCO2-220ENST00000511816 FRMD6Q96NE9 622 aa6.56□□□□□ -1.36
CALCOCO2-220ENST00000511816 GSX2Q9BZM3 304 aa6.56□□□□□ -1.36
CALCOCO2-220ENST00000511816 IGFLR1Q9H665 355 aa6.56□□□□□ -1.36
CALCOCO2-220ENST00000511816 ADAMTS8Q9UP79 889 aa6.56□□□□□ -1.36
CALCOCO2-220ENST00000511816 ELOA3CA0A087WX78 387 aaPredicted RBP6.55□□□□□ -1.36
CALCOCO2-220ENST00000511816 PNMA6FA0A0J9YX94 578 aa6.55□□□□□ -1.36
CALCOCO2-220ENST00000511816 ELOA3DA6NLF2 546 aaPredicted RBP6.55□□□□□ -1.36
CALCOCO2-220ENST00000511816 PRPF40AO75400 957 aaKnown RBP6.55□□□□□ -1.36
CALCOCO2-220ENST00000511816 SASH3O75995 380 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms