RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 PDE8AO60658 829 aa19.89■□□□□ 0.77
CXCL3-204ENST00000511669 GPTP24298 496 aa19.89■□□□□ 0.77
CXCL3-204ENST00000511669 NEK4P51957 841 aa19.89■□□□□ 0.77
CXCL3-204ENST00000511669 HLFQ16534 295 aa19.89■□□□□ 0.77
CXCL3-204ENST00000511669 LRRFIP1Q32MZ4 808 aaKnown RBP19.89■□□□□ 0.77
CXCL3-204ENST00000511669 ATG9AQ7Z3C6 839 aa19.89■□□□□ 0.77
CXCL3-204ENST00000511669 ANKRD18BA2A2Z9 1011 aa19.88■□□□□ 0.77
CXCL3-204ENST00000511669 INTS5Q6P9B9 1019 aaKnown RBP19.88■□□□□ 0.77
CXCL3-204ENST00000511669 NEUROD6Q96NK8 337 aa19.88■□□□□ 0.77
CXCL3-204ENST00000511669 HAUS7Q99871 368 aa19.88■□□□□ 0.77
CXCL3-204ENST00000511669 LSG1Q9H089 658 aaKnown RBP19.88■□□□□ 0.77
CXCL3-204ENST00000511669 TBC1D2BQ9UPU7 963 aa19.88■□□□□ 0.77
CXCL3-204ENST00000511669 ZNF609O15014 1411 aa19.88■□□□□ 0.77
CXCL3-204ENST00000511669 SPEF2Q9C093 1822 aa19.88■□□□□ 0.77
CXCL3-204ENST00000511669 IRS4O14654 1257 aaPredicted RBP19.87■□□□□ 0.77
CXCL3-204ENST00000511669 PTMSP20962 102 aa19.87■□□□□ 0.77
CXCL3-204ENST00000511669 CTSWP56202 376 aa19.87■□□□□ 0.77
CXCL3-204ENST00000511669 ZNF34Q8IZ26 560 aa19.87■□□□□ 0.77
CXCL3-204ENST00000511669 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.87■□□□□ 0.77
CXCL3-204ENST00000511669 COL5A3P25940 1745 aaPredicted RBP19.87■□□□□ 0.77
CXCL3-204ENST00000511669 RGL2O15211 777 aa19.87■□□□□ 0.77
CXCL3-204ENST00000511669 ZKSCAN1P17029 563 aaPredicted RBP19.87■□□□□ 0.77
CXCL3-204ENST00000511669 RNF20Q5VTR2 975 aa19.87■□□□□ 0.77
CXCL3-204ENST00000511669 FBXO41Q8TF61 875 aa19.87■□□□□ 0.77
CXCL3-204ENST00000511669 DBNDD2Q9BQY9 259 aa19.87■□□□□ 0.77
CXCL3-204ENST00000511669 FRAT2O75474 233 aaPredicted RBP19.86■□□□□ 0.77
CXCL3-204ENST00000511669 CD2BP2O95400 341 aaKnown RBP19.86■□□□□ 0.77
CXCL3-204ENST00000511669 KCNJ4P48050 445 aa19.86■□□□□ 0.77
CXCL3-204ENST00000511669 CCDC158Q5M9N0 1113 aa19.86■□□□□ 0.77
CXCL3-204ENST00000511669 GBP4Q96PP9 640 aa19.86■□□□□ 0.77
CXCL3-204ENST00000511669 SNRKQ9NRH2 765 aa19.86■□□□□ 0.77
CXCL3-204ENST00000511669 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.86■□□□□ 0.77
CXCL3-204ENST00000511669 THSD7AQ9UPZ6 1657 aa19.86■□□□□ 0.77
CXCL3-204ENST00000511669 DDIT3P35638 169 aa19.85■□□□□ 0.77
CXCL3-204ENST00000511669 GORABQ5T7V8 394 aa19.85■□□□□ 0.77
CXCL3-204ENST00000511669 SH3TC1Q8TE82 1336 aa19.85■□□□□ 0.77
CXCL3-204ENST00000511669 NUCB2P80303 420 aa19.84■□□□□ 0.77
CXCL3-204ENST00000511669 NMIQ13287 307 aaPredicted RBP19.84■□□□□ 0.77
CXCL3-204ENST00000511669 TTLL11Q8NHH1 800 aa19.84■□□□□ 0.77
CXCL3-204ENST00000511669 UTP14AQ9BVJ6 771 aaKnown RBP19.84■□□□□ 0.77
CXCL3-204ENST00000511669 CCDC171Q6TFL3 1326 aa19.84■□□□□ 0.77
CXCL3-204ENST00000511669 A0A1B0GUL7 405 aa19.84■□□□□ 0.77
CXCL3-204ENST00000511669 LRRC24Q50LG9 513 aa19.84■□□□□ 0.77
CXCL3-204ENST00000511669 CLEC4GQ6UXB4 293 aa19.84■□□□□ 0.77
CXCL3-204ENST00000511669 ZNF594Q96JF6 807 aaPredicted RBP19.84■□□□□ 0.77
CXCL3-204ENST00000511669 DNAJC2Q99543 621 aaKnown RBP19.84■□□□□ 0.77
CXCL3-204ENST00000511669 NHSQ6T4R5 1651 aa19.83■□□□□ 0.77
CXCL3-204ENST00000511669 ABCC12Q96J65 1359 aa19.83■□□□□ 0.77
CXCL3-204ENST00000511669 DDX11L8A8MPP1 907 aa19.83■□□□□ 0.76
CXCL3-204ENST00000511669 ITGA6P23229 1130 aa19.83■□□□□ 0.76
CXCL3-204ENST00000511669 ITPK1Q13572 414 aa19.83■□□□□ 0.76
CXCL3-204ENST00000511669 LDHAL6AQ6ZMR3 332 aa19.83■□□□□ 0.76
CXCL3-204ENST00000511669 CNTNAP4Q9C0A0 1308 aa19.83■□□□□ 0.76
CXCL3-204ENST00000511669 CAMTA2O94983 1202 aa19.82■□□□□ 0.76
CXCL3-204ENST00000511669 IFIT1P09914 478 aaKnown RBP19.82■□□□□ 0.76
CXCL3-204ENST00000511669 KBTBD3Q8NAB2 608 aa19.82■□□□□ 0.76
CXCL3-204ENST00000511669 CNNM1Q9NRU3 951 aa19.82■□□□□ 0.76
CXCL3-204ENST00000511669 PALD1Q9ULE6 856 aa19.82■□□□□ 0.76
CXCL3-204ENST00000511669 BCORQ6W2J9 1755 aa19.82■□□□□ 0.76
CXCL3-204ENST00000511669 PSMA5P28066 241 aa19.81■□□□□ 0.76
CXCL3-204ENST00000511669 METTL24Q5JXM2 366 aa19.81■□□□□ 0.76
CXCL3-204ENST00000511669 TTC39AQ5SRH9 613 aa19.81■□□□□ 0.76
CXCL3-204ENST00000511669 TM6SF1Q9BZW5 370 aa19.81■□□□□ 0.76
CXCL3-204ENST00000511669 PAG1Q9NWQ8 432 aa19.81■□□□□ 0.76
CXCL3-204ENST00000511669 HMG20BQ9P0W2 317 aa19.81■□□□□ 0.76
CXCL3-204ENST00000511669 SNX14Q9Y5W7 946 aa19.81■□□□□ 0.76
CXCL3-204ENST00000511669 LAMB2P55268 1798 aa19.8■□□□□ 0.76
CXCL3-204ENST00000511669 UBN2Q6ZU65 1347 aa19.8■□□□□ 0.76
CXCL3-204ENST00000511669 KCNQ2O43526 872 aa19.8■□□□□ 0.76
CXCL3-204ENST00000511669 RAB3GAP1Q15042 981 aa19.8■□□□□ 0.76
CXCL3-204ENST00000511669 RC3H1Q5TC82 1133 aaKnown RBP19.8■□□□□ 0.76
CXCL3-204ENST00000511669 IL25Q9H293 177 aa19.8■□□□□ 0.76
CXCL3-204ENST00000511669 MED23Q9ULK4 1368 aa19.8■□□□□ 0.76
CXCL3-204ENST00000511669 GOLGA6L22H0YM25 854 aa19.8■□□□□ 0.76
CXCL3-204ENST00000511669 TIMM10P62072 90 aa19.8■□□□□ 0.76
CXCL3-204ENST00000511669 MAP4K1Q92918 833 aa19.8■□□□□ 0.76
CXCL3-204ENST00000511669 INTS4Q96HW7 963 aaKnown RBP19.8■□□□□ 0.76
CXCL3-204ENST00000511669 GJD4Q96KN9 370 aaPredicted RBP19.8■□□□□ 0.76
CXCL3-204ENST00000511669 TRPC5Q9UL62 973 aaPredicted RBP19.8■□□□□ 0.76
CXCL3-204ENST00000511669 MROH5Q6ZUA9 1318 aa19.79■□□□□ 0.76
CXCL3-204ENST00000511669 MCM4P33991 863 aa19.79■□□□□ 0.76
CXCL3-204ENST00000511669 ATP2B3Q16720 1220 aa19.79■□□□□ 0.76
CXCL3-204ENST00000511669 CCDC152Q4G0S7 254 aa19.79■□□□□ 0.76
CXCL3-204ENST00000511669 KCNB2Q92953 911 aa19.79■□□□□ 0.76
CXCL3-204ENST00000511669 FAM227BQ96M60 508 aa19.79■□□□□ 0.76
CXCL3-204ENST00000511669 PUS3Q9BZE2 481 aaKnown RBP19.79■□□□□ 0.76
CXCL3-204ENST00000511669 GREM2Q9H772 168 aa19.79■□□□□ 0.76
CXCL3-204ENST00000511669 NIP7Q9Y221 180 aaKnown RBP eCLIP19.79■□□□□ 0.76
CXCL3-204ENST00000511669 MYH14Q7Z406 1995 aaKnown RBP19.78■□□□□ 0.76
CXCL3-204ENST00000511669 BTAF1O14981 1849 aa19.78■□□□□ 0.76
CXCL3-204ENST00000511669 KRT32Q14532 448 aa19.78■□□□□ 0.76
CXCL3-204ENST00000511669 MCMDC2Q4G0Z9 681 aa19.78■□□□□ 0.76
CXCL3-204ENST00000511669 ILDR1Q86SU0 546 aaPredicted RBP19.78■□□□□ 0.76
CXCL3-204ENST00000511669 HELLSQ9NRZ9 838 aa19.78■□□□□ 0.76
CXCL3-204ENST00000511669 FOXD4L1Q9NU39 408 aa19.78■□□□□ 0.76
CXCL3-204ENST00000511669 RBM8AQ9Y5S9 174 aaKnown RBP19.78■□□□□ 0.76
CXCL3-204ENST00000511669 AFF2P51816 1311 aa19.77■□□□□ 0.76
CXCL3-204ENST00000511669 A0A0D9SFI3 127 aa19.77■□□□□ 0.76
CXCL3-204ENST00000511669 ZFYP08048 801 aaPredicted RBP19.77■□□□□ 0.76
CXCL3-204ENST00000511669 HMGB2P26583 209 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms