RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 CCER1Q8TC90 406 aaPredicted RBP7.61□□□□□ -1.19
HMGB3P13-201ENST00000511263 HSH2DQ96JZ2 352 aa7.61□□□□□ -1.19
HMGB3P13-201ENST00000511263 ZNF587Q96SQ5 575 aaPredicted RBP7.61□□□□□ -1.19
HMGB3P13-201ENST00000511263 STIM2Q9P246 746 aa7.61□□□□□ -1.19
HMGB3P13-201ENST00000511263 BRD1O95696 1058 aa7.6□□□□□ -1.19
HMGB3P13-201ENST00000511263 ALBP02768 609 aa7.6□□□□□ -1.19
HMGB3P13-201ENST00000511263 TYRO3Q06418 890 aa7.6□□□□□ -1.19
HMGB3P13-201ENST00000511263 SF3B2Q13435 895 aaKnown RBP7.6□□□□□ -1.19
HMGB3P13-201ENST00000511263 COX20Q5RI15 118 aa7.6□□□□□ -1.19
HMGB3P13-201ENST00000511263 TTC16Q8NEE8 873 aa7.6□□□□□ -1.19
HMGB3P13-201ENST00000511263 PNMA5Q96PV4 448 aa7.6□□□□□ -1.19
HMGB3P13-201ENST00000511263 KLK14Q9P0G3 267 aa7.6□□□□□ -1.19
HMGB3P13-201ENST00000511263 FNDC3AQ9Y2H6 1198 aaKnown RBP7.6□□□□□ -1.19
HMGB3P13-201ENST00000511263 ADARB2-AS1A8MUL3 147 aa7.59□□□□□ -1.19
HMGB3P13-201ENST00000511263 SIN3BO75182 1162 aa7.59□□□□□ -1.19
HMGB3P13-201ENST00000511263 MICAL2O94851 1124 aa7.59□□□□□ -1.19
HMGB3P13-201ENST00000511263 ALAS2P22557 587 aa7.59□□□□□ -1.19
HMGB3P13-201ENST00000511263 IDH3AP50213 366 aa7.59□□□□□ -1.19
HMGB3P13-201ENST00000511263 NAA30Q147X3 362 aaPredicted RBP7.59□□□□□ -1.19
HMGB3P13-201ENST00000511263 RAB44Q7Z6P3 723 aaPredicted RBP7.59□□□□□ -1.19
HMGB3P13-201ENST00000511263 HELQQ8TDG4 1101 aa7.59□□□□□ -1.19
HMGB3P13-201ENST00000511263 FAM13AO94988 1023 aa7.58□□□□□ -1.2
HMGB3P13-201ENST00000511263 PCSK7Q16549 785 aa7.58□□□□□ -1.2
HMGB3P13-201ENST00000511263 PRRT3Q5FWE3 981 aa7.58□□□□□ -1.2
HMGB3P13-201ENST00000511263 TREML1Q86YW5 311 aa7.58□□□□□ -1.2
HMGB3P13-201ENST00000511263 ZNF280CQ8ND82 737 aa7.58□□□□□ -1.2
HMGB3P13-201ENST00000511263 PIK3R5Q8WYR1 880 aa7.58□□□□□ -1.2
HMGB3P13-201ENST00000511263 DYRK3O43781 588 aa7.57□□□□□ -1.2
HMGB3P13-201ENST00000511263 SPEM2Q0P670 501 aa7.57□□□□□ -1.2
HMGB3P13-201ENST00000511263 GRIK4Q16099 956 aa7.57□□□□□ -1.2
HMGB3P13-201ENST00000511263 MICALL1Q8N3F8 863 aa7.57□□□□□ -1.2
HMGB3P13-201ENST00000511263 EGFL7Q9UHF1 273 aa7.57□□□□□ -1.2
HMGB3P13-201ENST00000511263 SCO2A0A1W2PP80 73 aa7.56□□□□□ -1.2
HMGB3P13-201ENST00000511263 SPDYE3A6NKU9 549 aa7.56□□□□□ -1.2
HMGB3P13-201ENST00000511263 APBA3O96018 575 aa7.56□□□□□ -1.2
HMGB3P13-201ENST00000511263 PDIA4P13667 645 aaKnown RBP7.56□□□□□ -1.2
HMGB3P13-201ENST00000511263 NID1P14543 1247 aa7.56□□□□□ -1.2
HMGB3P13-201ENST00000511263 INPP5BP32019 993 aa7.56□□□□□ -1.2
HMGB3P13-201ENST00000511263 CCINQ13939 588 aa7.56□□□□□ -1.2
HMGB3P13-201ENST00000511263 GTF3C2Q8WUA4 911 aaPredicted RBP7.56□□□□□ -1.2
HMGB3P13-201ENST00000511263 TNFRSF25Q93038 417 aa7.56□□□□□ -1.2
HMGB3P13-201ENST00000511263 LRFN2Q9ULH4 789 aa7.56□□□□□ -1.2
HMGB3P13-201ENST00000511263 ABL1P00519 1130 aa7.55□□□□□ -1.2
HMGB3P13-201ENST00000511263 ADH7P40394 386 aa7.55□□□□□ -1.2
HMGB3P13-201ENST00000511263 FKBP4Q02790 459 aaKnown RBP eCLIP7.55□□□□□ -1.2
HMGB3P13-201ENST00000511263 AAMPQ13685 434 aa7.55□□□□□ -1.2
HMGB3P13-201ENST00000511263 NOM1Q5C9Z4 860 aaKnown RBP7.55□□□□□ -1.2
HMGB3P13-201ENST00000511263 PRDM6Q9NQX0 595 aa7.55□□□□□ -1.2
HMGB3P13-201ENST00000511263 SLAIN2Q9P270 581 aa7.55□□□□□ -1.2
HMGB3P13-201ENST00000511263 C20orf204Q6ZNR8 217 aa7.54□□□□□ -1.2
HMGB3P13-201ENST00000511263 TRAIPQ9BWF2 469 aa7.54□□□□□ -1.2
HMGB3P13-201ENST00000511263 SAP130Q9H0E3 1048 aa7.54□□□□□ -1.2
HMGB3P13-201ENST00000511263 SEPT3Q9UH03 358 aa7.54□□□□□ -1.2
HMGB3P13-201ENST00000511263 DMGDHQ9UI17 866 aaKnown RBP7.54□□□□□ -1.2
HMGB3P13-201ENST00000511263 BCS1LQ9Y276 419 aa7.54□□□□□ -1.2
HMGB3P13-201ENST00000511263 ZAP70P43403 619 aa7.53□□□□□ -1.2
HMGB3P13-201ENST00000511263 USP5P45974 858 aa7.53□□□□□ -1.2
HMGB3P13-201ENST00000511263 KCNA1Q09470 495 aa7.53□□□□□ -1.2
HMGB3P13-201ENST00000511263 TRIM28Q13263 835 aaKnown RBP7.53□□□□□ -1.2
HMGB3P13-201ENST00000511263 PRSS36Q5K4E3 855 aa7.53□□□□□ -1.2
HMGB3P13-201ENST00000511263 CMTR1Q8N1G2 835 aaKnown RBP7.53□□□□□ -1.2
HMGB3P13-201ENST00000511263 RTCBQ9Y3I0 505 aaKnown RBP7.53□□□□□ -1.2
HMGB3P13-201ENST00000511263 GLYCTKQ8IVS8 523 aa7.52□□□□□ -1.21
HMGB3P13-201ENST00000511263 RGL4Q8IZJ4 473 aa7.52□□□□□ -1.21
HMGB3P13-201ENST00000511263 BHMTQ93088 406 aa7.52□□□□□ -1.21
HMGB3P13-201ENST00000511263 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.52□□□□□ -1.21
HMGB3P13-201ENST00000511263 CARNS1A5YM72 827 aa7.51□□□□□ -1.21
HMGB3P13-201ENST00000511263 TNFRSF10BO14763 440 aa7.51□□□□□ -1.21
HMGB3P13-201ENST00000511263 EGFRP00533 1210 aa7.51□□□□□ -1.21
HMGB3P13-201ENST00000511263 SELPP16109 830 aa7.51□□□□□ -1.21
HMGB3P13-201ENST00000511263 EHHADHQ08426 723 aa7.51□□□□□ -1.21
HMGB3P13-201ENST00000511263 PHLDB3Q6NSJ2 640 aa7.51□□□□□ -1.21
HMGB3P13-201ENST00000511263 ETFBKMTQ8IXQ9 262 aa7.51□□□□□ -1.21
HMGB3P13-201ENST00000511263 XYLBO75191 536 aa7.5□□□□□ -1.21
HMGB3P13-201ENST00000511263 TRAPPC3LQ5T215 181 aa7.5□□□□□ -1.21
HMGB3P13-201ENST00000511263 ARTNQ5T4W7 220 aa7.5□□□□□ -1.21
HMGB3P13-201ENST00000511263 CAPN12Q6ZSI9 719 aa7.5□□□□□ -1.21
HMGB3P13-201ENST00000511263 NACC1Q96RE7 527 aa7.5□□□□□ -1.21
HMGB3P13-201ENST00000511263 GSX2Q9BZM3 304 aa7.5□□□□□ -1.21
HMGB3P13-201ENST00000511263 UBAP1LF5GYI3 381 aa7.49□□□□□ -1.21
HMGB3P13-201ENST00000511263 OPLAHO14841 1288 aa7.49□□□□□ -1.21
HMGB3P13-201ENST00000511263 ICMTO60725 284 aa7.49□□□□□ -1.21
HMGB3P13-201ENST00000511263 MAP3K6O95382 1288 aa7.49□□□□□ -1.21
HMGB3P13-201ENST00000511263 RARAP10276 462 aa7.49□□□□□ -1.21
HMGB3P13-201ENST00000511263 NPR3P17342 541 aa7.49□□□□□ -1.21
HMGB3P13-201ENST00000511263 MZF1P28698 734 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P13-201ENST00000511263 MBTPS1Q14703 1052 aa7.49□□□□□ -1.21
HMGB3P13-201ENST00000511263 SHISA2Q6UWI4 295 aa7.49□□□□□ -1.21
HMGB3P13-201ENST00000511263 TXNDC2Q86VQ3 553 aa7.49□□□□□ -1.21
HMGB3P13-201ENST00000511263 ZFP64Q9NPA5 681 aa7.49□□□□□ -1.21
HMGB3P13-201ENST00000511263 GNEQ9Y223 722 aaKnown RBP7.49□□□□□ -1.21
HMGB3P13-201ENST00000511263 A0A0A0MRY4 1105 aa7.48□□□□□ -1.21
HMGB3P13-201ENST00000511263 PSAPP07602 524 aa7.48□□□□□ -1.21
HMGB3P13-201ENST00000511263 NFKB1P19838 968 aa7.48□□□□□ -1.21
HMGB3P13-201ENST00000511263 MPSTP25325 297 aa7.48□□□□□ -1.21
HMGB3P13-201ENST00000511263 EIF1AXP47813 144 aaKnown RBP7.48□□□□□ -1.21
HMGB3P13-201ENST00000511263 TBC1D8BQ0IIM8 1120 aa7.48□□□□□ -1.21
HMGB3P13-201ENST00000511263 ADGRE1Q14246 886 aa7.48□□□□□ -1.21
HMGB3P13-201ENST00000511263 PDE12Q6L8Q7 609 aaKnown RBP7.48□□□□□ -1.21
HMGB3P13-201ENST00000511263 NLRP13Q86W25 1043 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms