RNA–Protein interactions for RNA: ENST00000511255.1

SMAD1-210, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-210ENST00000511255 LOC102724428A0A0B4J2F2 783 aa10.21□□□□□ -0.77
SMAD1-210ENST00000511255 ADH1BP00325 375 aa10.21□□□□□ -0.77
SMAD1-210ENST00000511255 HMGB2P26583 209 aaKnown RBP10.21□□□□□ -0.77
SMAD1-210ENST00000511255 SIK1P57059 783 aa10.21□□□□□ -0.77
SMAD1-210ENST00000511255 RNF19BQ6ZMZ0 732 aa10.21□□□□□ -0.77
SMAD1-210ENST00000511255 NUTM1Q86Y26 1132 aa10.21□□□□□ -0.77
SMAD1-210ENST00000511255 FAM160A2Q8N612 972 aaPredicted RBP10.21□□□□□ -0.77
SMAD1-210ENST00000511255 NFATC2IPQ8NCF5 419 aa10.21□□□□□ -0.77
SMAD1-210ENST00000511255 SPSB2Q99619 263 aa10.21□□□□□ -0.77
SMAD1-210ENST00000511255 LGR6Q9HBX8 967 aa10.21□□□□□ -0.77
SMAD1-210ENST00000511255 ATG3Q9NT62 314 aa10.21□□□□□ -0.77
SMAD1-210ENST00000511255 MYBBP1AQ9BQG0 1328 aaKnown RBP10.21□□□□□ -0.78
SMAD1-210ENST00000511255 LY75O60449 1722 aa10.21□□□□□ -0.78
SMAD1-210ENST00000511255 GNAT3A8MTJ3 354 aa10.2□□□□□ -0.78
SMAD1-210ENST00000511255 PAPPAQ13219 1627 aa10.2□□□□□ -0.78
SMAD1-210ENST00000511255 PHACTR3Q96KR7 559 aa10.2□□□□□ -0.78
SMAD1-210ENST00000511255 MAP3K5Q99683 1374 aa10.2□□□□□ -0.78
SMAD1-210ENST00000511255 SLC52A2Q9HAB3 445 aa10.2□□□□□ -0.78
SMAD1-210ENST00000511255 GPBP1L1Q9HC44 474 aaPredicted RBP10.2□□□□□ -0.78
SMAD1-210ENST00000511255 PTCD1O75127 700 aaKnown RBP10.19□□□□□ -0.78
SMAD1-210ENST00000511255 S1PR4O95977 384 aa10.19□□□□□ -0.78
SMAD1-210ENST00000511255 NDUFV2P19404 249 aa10.19□□□□□ -0.78
SMAD1-210ENST00000511255 TEFQ10587 303 aa10.19□□□□□ -0.78
SMAD1-210ENST00000511255 PCDHGC3Q9UN70 934 aa10.19□□□□□ -0.78
SMAD1-210ENST00000511255 PDZRN3Q9UPQ7 1066 aa10.19□□□□□ -0.78
SMAD1-210ENST00000511255 LRP5O75197 1615 aa10.18□□□□□ -0.78
SMAD1-210ENST00000511255 PNPLA7Q6ZV29 1317 aa10.18□□□□□ -0.78
SMAD1-210ENST00000511255 MOXD2PA6NHM9 499 aa10.18□□□□□ -0.78
SMAD1-210ENST00000511255 RNF223E7ERA6 249 aa10.18□□□□□ -0.78
SMAD1-210ENST00000511255 PPEF1O14829 653 aaPredicted RBP10.18□□□□□ -0.78
SMAD1-210ENST00000511255 FMNL1O95466 1100 aaPredicted RBP10.18□□□□□ -0.78
SMAD1-210ENST00000511255 LINC00116Q8NCU8 138 aa10.18□□□□□ -0.78
SMAD1-210ENST00000511255 RTF1Q92541 710 aaKnown RBP10.18□□□□□ -0.78
SMAD1-210ENST00000511255 TBC1D2Q9BYX2 928 aa10.18□□□□□ -0.78
SMAD1-210ENST00000511255 MTFR1LQ9H019 292 aa10.18□□□□□ -0.78
SMAD1-210ENST00000511255 PRKRIP1Q9H875 184 aaPredicted RBP10.18□□□□□ -0.78
SMAD1-210ENST00000511255 MAPK8IP3Q9UPT6 1336 aa10.17□□□□□ -0.78
SMAD1-210ENST00000511255 SLC39A6Q13433 755 aa10.17□□□□□ -0.78
SMAD1-210ENST00000511255 ITPK1Q13572 414 aa10.17□□□□□ -0.78
SMAD1-210ENST00000511255 TTC5Q8N0Z6 440 aa10.17□□□□□ -0.78
SMAD1-210ENST00000511255 SLC6A16Q9GZN6 736 aa10.17□□□□□ -0.78
SMAD1-210ENST00000511255 PNNQ9H307 717 aaKnown RBP10.17□□□□□ -0.78
SMAD1-210ENST00000511255 C5P01031 1676 aa10.17□□□□□ -0.78
SMAD1-210ENST00000511255 CASZ1Q86V15 1759 aa10.16□□□□□ -0.78
SMAD1-210ENST00000511255 SCN11AQ9UI33 1791 aa10.16□□□□□ -0.78
SMAD1-210ENST00000511255 WDR43Q15061 677 aaKnown RBP eCLIP10.16□□□□□ -0.78
SMAD1-210ENST00000511255 COL23A1Q86Y22 540 aaPredicted RBP10.16□□□□□ -0.78
SMAD1-210ENST00000511255 FLAD1Q8NFF5 587 aa10.16□□□□□ -0.78
SMAD1-210ENST00000511255 SLC16A10Q8TF71 515 aa10.16□□□□□ -0.78
SMAD1-210ENST00000511255 SYMPKQ92797 1274 aaKnown RBP10.16□□□□□ -0.78
SMAD1-210ENST00000511255 KDM4CQ9H3R0 1056 aa10.16□□□□□ -0.78
SMAD1-210ENST00000511255 POLD1P28340 1107 aa10.15□□□□□ -0.78
SMAD1-210ENST00000511255 MSL1Q68DK7 614 aa10.15□□□□□ -0.78
SMAD1-210ENST00000511255 SMIM5Q71RC9 77 aa10.15□□□□□ -0.78
SMAD1-210ENST00000511255 MCM10Q7L590 875 aa10.15□□□□□ -0.78
SMAD1-210ENST00000511255 IL17REQ8NFR9 667 aa10.15□□□□□ -0.78
SMAD1-210ENST00000511255 EMID1Q96A84 441 aaPredicted RBP10.15□□□□□ -0.78
SMAD1-210ENST00000511255 SLC4A9Q96Q91 983 aa10.15□□□□□ -0.78
SMAD1-210ENST00000511255 C4BP0C0L5 1744 aa10.15□□□□□ -0.78
SMAD1-210ENST00000511255 MRC1P22897 1456 aa10.15□□□□□ -0.78
SMAD1-210ENST00000511255 SRCAPQ6ZRS2 3230 aa10.14□□□□□ -0.79
SMAD1-210ENST00000511255 FDX1P10109 184 aa10.14□□□□□ -0.79
SMAD1-210ENST00000511255 PRKCSHP14314 528 aaPredicted RBP10.14□□□□□ -0.79
SMAD1-210ENST00000511255 GGCXP38435 758 aa10.14□□□□□ -0.79
SMAD1-210ENST00000511255 DCTN1Q14203 1278 aa10.14□□□□□ -0.79
SMAD1-210ENST00000511255 Q3C1V9 767 aa10.14□□□□□ -0.79
SMAD1-210ENST00000511255 PRDM9Q9NQV7 894 aa10.14□□□□□ -0.79
SMAD1-210ENST00000511255 RTCBQ9Y3I0 505 aaKnown RBP10.14□□□□□ -0.79
SMAD1-210ENST00000511255 TAF1LQ8IZX4 1826 aa10.14□□□□□ -0.79
SMAD1-210ENST00000511255 TUBGCP6Q96RT7 1819 aa10.13□□□□□ -0.79
SMAD1-210ENST00000511255 BTBD11A6QL63 1104 aa10.13□□□□□ -0.79
SMAD1-210ENST00000511255 ANP32CO43423 234 aa10.13□□□□□ -0.79
SMAD1-210ENST00000511255 SSFA2P28290 1259 aa10.13□□□□□ -0.79
SMAD1-210ENST00000511255 CRKLP46109 303 aaKnown RBP10.13□□□□□ -0.79
SMAD1-210ENST00000511255 AMIGO3Q86WK7 504 aa10.13□□□□□ -0.79
SMAD1-210ENST00000511255 DNAJC10Q8IXB1 793 aa10.13□□□□□ -0.79
SMAD1-210ENST00000511255 CCDC146Q8IYE0 955 aa10.13□□□□□ -0.79
SMAD1-210ENST00000511255 ARXQ96QS3 562 aa10.13□□□□□ -0.79
SMAD1-210ENST00000511255 PLEKHF1Q96S99 279 aa10.13□□□□□ -0.79
SMAD1-210ENST00000511255 HTATSF1O43719 755 aaKnown RBP10.12□□□□□ -0.79
SMAD1-210ENST00000511255 NEUROD2Q15784 382 aa10.12□□□□□ -0.79
SMAD1-210ENST00000511255 NFE2L2Q16236 605 aa10.12□□□□□ -0.79
SMAD1-210ENST00000511255 MSS51Q4VC12 460 aa10.12□□□□□ -0.79
SMAD1-210ENST00000511255 TRAPPC3LQ5T215 181 aa10.12□□□□□ -0.79
SMAD1-210ENST00000511255 RC3H1Q5TC82 1133 aaKnown RBP10.12□□□□□ -0.79
SMAD1-210ENST00000511255 ZNF790Q6PG37 636 aa10.12□□□□□ -0.79
SMAD1-210ENST00000511255 USB1Q9BQ65 265 aaKnown RBP10.12□□□□□ -0.79
SMAD1-210ENST00000511255 FAM117AQ9C073 453 aa10.12□□□□□ -0.79
SMAD1-210ENST00000511255 PCDHB15Q9Y5E8 787 aa10.12□□□□□ -0.79
SMAD1-210ENST00000511255 QSER1Q2KHR3 1735 aa10.12□□□□□ -0.79
SMAD1-210ENST00000511255 CEMIPQ8WUJ3 1361 aa10.12□□□□□ -0.79
SMAD1-210ENST00000511255 ADAMTS7Q9UKP4 1686 aa10.12□□□□□ -0.79
SMAD1-210ENST00000511255 VIRMAQ69YN4 1812 aaKnown RBP10.12□□□□□ -0.79
SMAD1-210ENST00000511255 CNTNAP4Q9C0A0 1308 aa10.11□□□□□ -0.79
SMAD1-210ENST00000511255 SPTLC1O15269 473 aa10.11□□□□□ -0.79
SMAD1-210ENST00000511255 PLA2G2CQ5R387 149 aa10.11□□□□□ -0.79
SMAD1-210ENST00000511255 MYSM1Q5VVJ2 828 aa10.11□□□□□ -0.79
SMAD1-210ENST00000511255 RSBN1LQ6PCB5 846 aaPredicted RBP10.11□□□□□ -0.79
SMAD1-210ENST00000511255 ANKLE1Q8NAG6 615 aa10.11□□□□□ -0.79
SMAD1-210ENST00000511255 FMNL2Q96PY5 1086 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms