RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 MMP10P09238 476 aa6.88□□□□□ -1.31
PROM1-211ENST00000511153 SSFA2P28290 1259 aa6.88□□□□□ -1.31
PROM1-211ENST00000511153 DDR1Q08345 913 aa6.88□□□□□ -1.31
PROM1-211ENST00000511153 NFIXQ14938 502 aa6.88□□□□□ -1.31
PROM1-211ENST00000511153 ANKRD13DQ6ZTN6 518 aa6.88□□□□□ -1.31
PROM1-211ENST00000511153 NUTM1Q86Y26 1132 aa6.88□□□□□ -1.31
PROM1-211ENST00000511153 PANK1Q8TE04 598 aa6.88□□□□□ -1.31
PROM1-211ENST00000511153 CCDC85AQ96PX6 553 aaPredicted RBP6.88□□□□□ -1.31
PROM1-211ENST00000511153 NARFQ9UHQ1 456 aa6.88□□□□□ -1.31
PROM1-211ENST00000511153 NIP7Q9Y221 180 aaKnown RBP eCLIP6.88□□□□□ -1.31
PROM1-211ENST00000511153 ARFGEF2Q9Y6D5 1785 aa6.88□□□□□ -1.31
PROM1-211ENST00000511153 AFDNP55196 1824 aaKnown RBP6.88□□□□□ -1.31
PROM1-211ENST00000511153 A0A087WZG4 1122 aa6.87□□□□□ -1.31
PROM1-211ENST00000511153 RLBP1P12271 317 aa6.87□□□□□ -1.31
PROM1-211ENST00000511153 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.87□□□□□ -1.31
PROM1-211ENST00000511153 CICQ96RK0 1608 aaPredicted RBP6.87□□□□□ -1.31
PROM1-211ENST00000511153 UBN2Q6ZU65 1347 aa6.87□□□□□ -1.31
PROM1-211ENST00000511153 BCORQ6W2J9 1755 aa6.87□□□□□ -1.31
PROM1-211ENST00000511153 CASZ1Q86V15 1759 aa6.87□□□□□ -1.31
PROM1-211ENST00000511153 SUSD4Q5VX71 490 aa6.86□□□□□ -1.31
PROM1-211ENST00000511153 KSR2Q6VAB6 950 aa6.86□□□□□ -1.31
PROM1-211ENST00000511153 PLBD2Q8NHP8 589 aa6.86□□□□□ -1.31
PROM1-211ENST00000511153 DNAAF4Q8WXU2 420 aa6.86□□□□□ -1.31
PROM1-211ENST00000511153 ERBB4Q15303 1308 aa6.86□□□□□ -1.31
PROM1-211ENST00000511153 SCN7AQ01118 1682 aa6.86□□□□□ -1.31
PROM1-211ENST00000511153 DDX58O95786 925 aaKnown RBP6.86□□□□□ -1.31
PROM1-211ENST00000511153 IGKV5-2P06315 115 aa6.86□□□□□ -1.31
PROM1-211ENST00000511153 HCLS1P14317 486 aaPredicted RBP6.86□□□□□ -1.31
PROM1-211ENST00000511153 TRIM27P14373 513 aa6.86□□□□□ -1.31
PROM1-211ENST00000511153 GTF2E1P29083 439 aaPredicted RBP6.86□□□□□ -1.31
PROM1-211ENST00000511153 ALDH1L2Q3SY69 923 aa6.86□□□□□ -1.31
PROM1-211ENST00000511153 ERFEQ4G0M1 354 aa6.86□□□□□ -1.31
PROM1-211ENST00000511153 GIGYF2Q6Y7W6 1299 aaKnown RBP6.86□□□□□ -1.31
PROM1-211ENST00000511153 TMEM57Q8N5G2 664 aa6.86□□□□□ -1.31
PROM1-211ENST00000511153 FAM89AQ96GI7 184 aa6.86□□□□□ -1.31
PROM1-211ENST00000511153 C1orf115Q9H7X2 142 aa6.86□□□□□ -1.31
PROM1-211ENST00000511153 COG6Q9Y2V7 657 aa6.86□□□□□ -1.31
PROM1-211ENST00000511153 CARMIL3Q8ND23 1372 aa6.85□□□□□ -1.31
PROM1-211ENST00000511153 CACNA1FO60840 1977 aa6.85□□□□□ -1.31
PROM1-211ENST00000511153 SERPINB2P05120 415 aa6.85□□□□□ -1.31
PROM1-211ENST00000511153 TCIRG1Q13488 830 aa6.85□□□□□ -1.31
PROM1-211ENST00000511153 ZKSCAN2Q63HK3 967 aa6.85□□□□□ -1.31
PROM1-211ENST00000511153 ERICH6Q7L0X2 663 aa6.85□□□□□ -1.31
PROM1-211ENST00000511153 SLC51AQ86UW1 340 aa6.85□□□□□ -1.31
PROM1-211ENST00000511153 NBPF5PQ86XG9 351 aaPredicted RBP6.85□□□□□ -1.31
PROM1-211ENST00000511153 ITPRIPQ8IWB1 547 aa6.85□□□□□ -1.31
PROM1-211ENST00000511153 FTSJ3Q8IY81 847 aaKnown RBP6.85□□□□□ -1.31
PROM1-211ENST00000511153 FLAD1Q8NFF5 587 aa6.85□□□□□ -1.31
PROM1-211ENST00000511153 SETDB2Q96T68 719 aa6.85□□□□□ -1.31
PROM1-211ENST00000511153 METTL22Q9BUU2 404 aaPredicted RBP6.85□□□□□ -1.31
PROM1-211ENST00000511153 BCL11AQ9H165 835 aa6.85□□□□□ -1.31
PROM1-211ENST00000511153 ZNF652Q9Y2D9 606 aa6.85□□□□□ -1.31
PROM1-211ENST00000511153 PARP3Q9Y6F1 533 aa6.85□□□□□ -1.31
PROM1-211ENST00000511153 QSER1Q2KHR3 1735 aa6.85□□□□□ -1.31
PROM1-211ENST00000511153 NEURL1BA8MQ27 555 aa6.84□□□□□ -1.31
PROM1-211ENST00000511153 POLRMTO00411 1230 aaKnown RBP6.84□□□□□ -1.31
PROM1-211ENST00000511153 MLLT3P42568 568 aaPredicted RBP6.84□□□□□ -1.31
PROM1-211ENST00000511153 RRP1P56182 461 aaKnown RBP6.84□□□□□ -1.31
PROM1-211ENST00000511153 BEND3Q5T5X7 828 aa6.84□□□□□ -1.31
PROM1-211ENST00000511153 ATF7IPQ6VMQ6 1270 aa6.84□□□□□ -1.31
PROM1-211ENST00000511153 UBE3BQ7Z3V4 1068 aa6.84□□□□□ -1.31
PROM1-211ENST00000511153 NLRP10Q86W26 655 aa6.84□□□□□ -1.31
PROM1-211ENST00000511153 CRBNQ96SW2 442 aa6.84□□□□□ -1.31
PROM1-211ENST00000511153 TRMT112Q9UI30 125 aaKnown RBP6.84□□□□□ -1.31
PROM1-211ENST00000511153 ABCC12Q96J65 1359 aa6.84□□□□□ -1.31
PROM1-211ENST00000511153 ANKRD36CQ5JPF3 1778 aa6.84□□□□□ -1.31
PROM1-211ENST00000511153 TAF1P21675 1872 aa6.84□□□□□ -1.31
PROM1-211ENST00000511153 ERVV-1B6SEH8 477 aa6.83□□□□□ -1.32
PROM1-211ENST00000511153 IPO8O15397 1037 aaKnown RBP6.83□□□□□ -1.32
PROM1-211ENST00000511153 CENPBP07199 599 aaPredicted RBP6.83□□□□□ -1.32
PROM1-211ENST00000511153 CT47B1P0C2W7 299 aaPredicted RBP6.83□□□□□ -1.32
PROM1-211ENST00000511153 POLD1P28340 1107 aa6.83□□□□□ -1.32
PROM1-211ENST00000511153 TM4SF1P30408 202 aa6.83□□□□□ -1.32
PROM1-211ENST00000511153 CHRNA5P30532 468 aa6.83□□□□□ -1.32
PROM1-211ENST00000511153 PTGER2P43116 358 aa6.83□□□□□ -1.32
PROM1-211ENST00000511153 NEXNQ0ZGT2 675 aa6.83□□□□□ -1.32
PROM1-211ENST00000511153 DZIP1LQ8IYY4 767 aaKnown RBP6.83□□□□□ -1.32
PROM1-211ENST00000511153 ZNF34Q8IZ26 560 aa6.83□□□□□ -1.32
PROM1-211ENST00000511153 NLGN1Q8N2Q7 840 aa6.83□□□□□ -1.32
PROM1-211ENST00000511153 CNBD1Q8NA66 436 aa6.83□□□□□ -1.32
PROM1-211ENST00000511153 SLAIN1Q8ND83 568 aa6.83□□□□□ -1.32
PROM1-211ENST00000511153 ISCA1Q9BUE6 129 aa6.83□□□□□ -1.32
PROM1-211ENST00000511153 UTP14AQ9BVJ6 771 aaKnown RBP6.83□□□□□ -1.32
PROM1-211ENST00000511153 API5Q9BZZ5 524 aaKnown RBP6.83□□□□□ -1.32
PROM1-211ENST00000511153 SRCIN1Q9C0H9 1055 aa6.83□□□□□ -1.32
PROM1-211ENST00000511153 MTFR1LQ9H019 292 aa6.83□□□□□ -1.32
PROM1-211ENST00000511153 SPON1Q9HCB6 807 aa6.83□□□□□ -1.32
PROM1-211ENST00000511153 CWC25Q9NXE8 425 aaPredicted RBP6.83□□□□□ -1.32
PROM1-211ENST00000511153 CHMP3Q9Y3E7 222 aa6.83□□□□□ -1.32
PROM1-211ENST00000511153 PTPRCP08575 1304 aa6.83□□□□□ -1.32
PROM1-211ENST00000511153 KIF16BQ96L93 1317 aa6.83□□□□□ -1.32
PROM1-211ENST00000511153 GOLGB1Q14789 3259 aaKnown RBP6.83□□□□□ -1.32
PROM1-211ENST00000511153 A0A0G2JLW4 131 aa6.82□□□□□ -1.32
PROM1-211ENST00000511153 NTSR2O95665 410 aa6.82□□□□□ -1.32
PROM1-211ENST00000511153 NBPF7P0C2Y1 421 aaPredicted RBP6.82□□□□□ -1.32
PROM1-211ENST00000511153 GCKRQ14397 625 aa6.82□□□□□ -1.32
PROM1-211ENST00000511153 PRR5LQ6MZQ0 368 aa6.82□□□□□ -1.32
PROM1-211ENST00000511153 NLGN2Q8NFZ4 835 aa6.82□□□□□ -1.32
PROM1-211ENST00000511153 MEIS3Q99687 375 aa6.82□□□□□ -1.32
PROM1-211ENST00000511153 C9orf78Q9NZ63 289 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms