RNA–Protein interactions for RNA: ENST00000511148.2

CLRN2-201, Transcript of clarin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN2, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2-201ENST00000511148 SLX4Q8IY92 1834 aa19.23■□□□□ 0.67
CLRN2-201ENST00000511148 FER1L6Q2WGJ9 1857 aa19.23■□□□□ 0.67
CLRN2-201ENST00000511148 GCKRQ14397 625 aa19.23■□□□□ 0.67
CLRN2-201ENST00000511148 DDX46Q7L014 1031 aaKnown RBP19.23■□□□□ 0.67
CLRN2-201ENST00000511148 YTHDC1Q96MU7 727 aaKnown RBP19.23■□□□□ 0.67
CLRN2-201ENST00000511148 NOB1Q9ULX3 412 aaKnown RBP19.23■□□□□ 0.67
CLRN2-201ENST00000511148 HOXA10P31260 410 aaPredicted RBP19.22■□□□□ 0.67
CLRN2-201ENST00000511148 FKBP4Q02790 459 aaKnown RBP eCLIP19.22■□□□□ 0.67
CLRN2-201ENST00000511148 BEND3Q5T5X7 828 aa19.22■□□□□ 0.67
CLRN2-201ENST00000511148 UBE3BQ7Z3V4 1068 aa19.22■□□□□ 0.67
CLRN2-201ENST00000511148 SRCIN1Q9C0H9 1055 aa19.22■□□□□ 0.67
CLRN2-201ENST00000511148 TMX4Q9H1E5 349 aaPredicted RBP19.22■□□□□ 0.67
CLRN2-201ENST00000511148 PDE8AO60658 829 aa19.21■□□□□ 0.67
CLRN2-201ENST00000511148 DDX60Q8IY21 1712 aaKnown RBP19.21■□□□□ 0.67
CLRN2-201ENST00000511148 SMC1BQ8NDV3 1235 aa19.21■□□□□ 0.67
CLRN2-201ENST00000511148 CRAMP1Q96RY5 1269 aa19.21■□□□□ 0.67
CLRN2-201ENST00000511148 LAMB2P55268 1798 aa19.21■□□□□ 0.67
CLRN2-201ENST00000511148 CC2D2BQ6DHV5 1058 aa19.2■□□□□ 0.66
CLRN2-201ENST00000511148 FRAT1Q92837 279 aaPredicted RBP19.2■□□□□ 0.66
CLRN2-201ENST00000511148 CCDC85AQ96PX6 553 aaPredicted RBP19.2■□□□□ 0.66
CLRN2-201ENST00000511148 C9orf78Q9NZ63 289 aaPredicted RBP19.2■□□□□ 0.66
CLRN2-201ENST00000511148 H7C1W4 665 aa19.19■□□□□ 0.66
CLRN2-201ENST00000511148 SF3B3Q15393 1217 aaKnown RBP19.19■□□□□ 0.66
CLRN2-201ENST00000511148 GRIPAP1Q4V328 841 aa19.19■□□□□ 0.66
CLRN2-201ENST00000511148 ABCC4O15439 1325 aa19.19■□□□□ 0.66
CLRN2-201ENST00000511148 CDHR2Q9BYE9 1310 aa19.19■□□□□ 0.66
CLRN2-201ENST00000511148 PPEF1O14829 653 aaPredicted RBP19.18■□□□□ 0.66
CLRN2-201ENST00000511148 BCAR3O75815 825 aa19.18■□□□□ 0.66
CLRN2-201ENST00000511148 ALDH1L1O75891 902 aa19.18■□□□□ 0.66
CLRN2-201ENST00000511148 CCDC152Q4G0S7 254 aa19.18■□□□□ 0.66
CLRN2-201ENST00000511148 API5Q9BZZ5 524 aaKnown RBP19.18■□□□□ 0.66
CLRN2-201ENST00000511148 KIF16BQ96L93 1317 aa19.18■□□□□ 0.66
CLRN2-201ENST00000511148 IPO8O15397 1037 aaKnown RBP19.17■□□□□ 0.66
CLRN2-201ENST00000511148 BBOX1O75936 387 aa19.17■□□□□ 0.66
CLRN2-201ENST00000511148 OLFM4Q6UX06 510 aa19.17■□□□□ 0.66
CLRN2-201ENST00000511148 CCDC88AQ3V6T2 1871 aa19.17■□□□□ 0.66
CLRN2-201ENST00000511148 TAF1P21675 1872 aa19.16■□□□□ 0.66
CLRN2-201ENST00000511148 BRPF1P55201 1214 aaPredicted RBP19.16■□□□□ 0.66
CLRN2-201ENST00000511148 GRAPQ13588 217 aa19.16■□□□□ 0.66
CLRN2-201ENST00000511148 GRAPLQ8TC17 118 aaPredicted RBP19.16■□□□□ 0.66
CLRN2-201ENST00000511148 PSMD1Q99460 953 aa19.16■□□□□ 0.66
CLRN2-201ENST00000511148 ZNF277Q9NRM2 450 aaPredicted RBP19.16■□□□□ 0.66
CLRN2-201ENST00000511148 WDR90Q96KV7 1748 aa19.16■□□□□ 0.66
CLRN2-201ENST00000511148 DICER1Q9UPY3 1922 aaKnown RBP19.15■□□□□ 0.66
CLRN2-201ENST00000511148 GRM8O00222 908 aa19.15■□□□□ 0.66
CLRN2-201ENST00000511148 CTSWP56202 376 aa19.15■□□□□ 0.66
CLRN2-201ENST00000511148 IQCA1LA6NCM1 817 aa19.14■□□□□ 0.65
CLRN2-201ENST00000511148 DDNO94850 711 aaPredicted RBP19.14■□□□□ 0.65
CLRN2-201ENST00000511148 IARSP41252 1262 aaKnown RBP19.14■□□□□ 0.65
CLRN2-201ENST00000511148 CELF1Q92879 486 aaKnown RBP19.14■□□□□ 0.65
CLRN2-201ENST00000511148 MYH3P11055 1940 aa19.13■□□□□ 0.65
CLRN2-201ENST00000511148 POTECB2RU33 542 aa19.13■□□□□ 0.65
CLRN2-201ENST00000511148 CCT4P50991 539 aaKnown RBP19.13■□□□□ 0.65
CLRN2-201ENST00000511148 CASP7P55210 303 aa19.13■□□□□ 0.65
CLRN2-201ENST00000511148 TTLL11Q8NHH1 800 aa19.13■□□□□ 0.65
CLRN2-201ENST00000511148 JDP2Q8WYK2 163 aa19.13■□□□□ 0.65
CLRN2-201ENST00000511148 ARHGAP45Q92619 1136 aa19.13■□□□□ 0.65
CLRN2-201ENST00000511148 SEC31BQ9NQW1 1179 aa19.13■□□□□ 0.65
CLRN2-201ENST00000511148 CHMP3Q9Y3E7 222 aa19.13■□□□□ 0.65
CLRN2-201ENST00000511148 ATP6V0A2Q9Y487 856 aa19.13■□□□□ 0.65
CLRN2-201ENST00000511148 CEP350Q5VT06 3117 aa19.12■□□□□ 0.65
CLRN2-201ENST00000511148 RPS8P62241 208 aaKnown RBP19.12■□□□□ 0.65
CLRN2-201ENST00000511148 SP8Q8IXZ3 490 aa19.12■□□□□ 0.65
CLRN2-201ENST00000511148 PLA2G12BQ9BX93 195 aa19.12■□□□□ 0.65
CLRN2-201ENST00000511148 ZKSCAN2Q63HK3 967 aa19.11■□□□□ 0.65
CLRN2-201ENST00000511148 ATF7IPQ6VMQ6 1270 aa19.11■□□□□ 0.65
CLRN2-201ENST00000511148 TMC4Q7Z404 712 aa19.11■□□□□ 0.65
CLRN2-201ENST00000511148 L3MBTL3Q96JM7 780 aaPredicted RBP19.11■□□□□ 0.65
CLRN2-201ENST00000511148 CDC5LQ99459 802 aaKnown RBP19.11■□□□□ 0.65
CLRN2-201ENST00000511148 GREM2Q9H772 168 aa19.11■□□□□ 0.65
CLRN2-201ENST00000511148 SNED1Q8TER0 1413 aa19.1■□□□□ 0.65
CLRN2-201ENST00000511148 NBPF7P0C2Y1 421 aaPredicted RBP19.1■□□□□ 0.65
CLRN2-201ENST00000511148 ANKRD18AQ8IVF6 992 aa19.1■□□□□ 0.65
CLRN2-201ENST00000511148 CLUAP1Q96AJ1 413 aa19.1■□□□□ 0.65
CLRN2-201ENST00000511148 FZD9O00144 591 aa19.09■□□□□ 0.65
CLRN2-201ENST00000511148 DPP8Q6V1X1 898 aaPredicted RBP19.09■□□□□ 0.65
CLRN2-201ENST00000511148 SLC51AQ86UW1 340 aa19.09■□□□□ 0.65
CLRN2-201ENST00000511148 MPNDQ8N594 471 aa19.09■□□□□ 0.65
CLRN2-201ENST00000511148 ZNF541Q9H0D2 1346 aa19.08■□□□□ 0.65
CLRN2-201ENST00000511148 TRIM27P14373 513 aa19.08■□□□□ 0.64
CLRN2-201ENST00000511148 ITGA6P23229 1130 aa19.08■□□□□ 0.64
CLRN2-201ENST00000511148 EIF6P56537 245 aaKnown RBP19.08■□□□□ 0.64
CLRN2-201ENST00000511148 FOXO4P98177 505 aa19.08■□□□□ 0.64
CLRN2-201ENST00000511148 LMBR1LQ6UX01 489 aa19.08■□□□□ 0.64
CLRN2-201ENST00000511148 LARGE2Q8N3Y3 721 aa19.08■□□□□ 0.64
CLRN2-201ENST00000511148 DNAJC5GQ8N7S2 189 aa19.08■□□□□ 0.64
CLRN2-201ENST00000511148 SUCLG2Q96I99 432 aa19.08■□□□□ 0.64
CLRN2-201ENST00000511148 NSFL1CQ9UNZ2 370 aaKnown RBP19.08■□□□□ 0.64
CLRN2-201ENST00000511148 ANKRD18BA2A2Z9 1011 aa19.07■□□□□ 0.64
CLRN2-201ENST00000511148 CSF1RP07333 972 aa19.07■□□□□ 0.64
CLRN2-201ENST00000511148 IGHMBP2P38935 993 aaKnown RBP19.07■□□□□ 0.64
CLRN2-201ENST00000511148 FAM161AQ3B820 660 aa19.07■□□□□ 0.64
CLRN2-201ENST00000511148 CHADLQ6NUI6 762 aa19.07■□□□□ 0.64
CLRN2-201ENST00000511148 FTSJ3Q8IY81 847 aaKnown RBP19.07■□□□□ 0.64
CLRN2-201ENST00000511148 GPC2Q8N158 579 aa19.07■□□□□ 0.64
CLRN2-201ENST00000511148 SUPT20HQ8NEM7 779 aa19.07■□□□□ 0.64
CLRN2-201ENST00000511148 USP44Q9H0E7 712 aa19.07■□□□□ 0.64
CLRN2-201ENST00000511148 VPS33BQ9H267 617 aa19.07■□□□□ 0.64
CLRN2-201ENST00000511148 IFIT5Q13325 482 aaKnown RBP19.06■□□□□ 0.64
CLRN2-201ENST00000511148 CCDC57Q2TAC2 916 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms