RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 AXIN2Q9Y2T1 843 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 LEMD3Q9Y2U8 911 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 MYBBP1AQ9BQG0 1328 aaKnown RBP3.55□□□□□ -1.84
CLOCK-209ENST00000511124 WDR33Q9C0J8 1336 aaKnown RBP3.55□□□□□ -1.84
CLOCK-209ENST00000511124 BRPF1P55201 1214 aaPredicted RBP3.55□□□□□ -1.84
CLOCK-209ENST00000511124 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.55□□□□□ -1.84
CLOCK-209ENST00000511124 AS3MTQ9HBK9 375 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 NMRK2Q9NPI5 230 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 POLKQ9UBT6 870 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 PLCH1Q4KWH8 1693 aa3.55□□□□□ -1.84
CLOCK-209ENST00000511124 IBTKQ9P2D0 1353 aaPredicted RBP3.55□□□□□ -1.84
CLOCK-209ENST00000511124 JMYQ8N9B5 988 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 TAF1DQ9H5J8 278 aaPredicted RBP3.54□□□□□ -1.84
CLOCK-209ENST00000511124 LRRFIP2Q9Y608 721 aaKnown RBP3.54□□□□□ -1.84
CLOCK-209ENST00000511124 HEG1Q9ULI3 1381 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 CYP27B1O15528 508 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 EIF5BO60841 1220 aaKnown RBP3.54□□□□□ -1.84
CLOCK-209ENST00000511124 MAP4K4O95819 1239 aaPredicted RBP3.54□□□□□ -1.84
CLOCK-209ENST00000511124 COA7Q96BR5 231 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 RUNDC1Q96C34 613 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 ZNF496Q96IT1 587 aaPredicted RBP3.54□□□□□ -1.84
CLOCK-209ENST00000511124 SPC25Q9HBM1 224 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 MAP3K15Q6ZN16 1313 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 UFL1O94874 794 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 USP17L8P0C7I0 530 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 RPS8P62241 208 aaKnown RBP3.54□□□□□ -1.84
CLOCK-209ENST00000511124 GRAPQ13588 217 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 RBM26Q5T8P6 1007 aaKnown RBP3.54□□□□□ -1.84
CLOCK-209ENST00000511124 PRPF38BQ5VTL8 546 aaKnown RBP3.54□□□□□ -1.84
CLOCK-209ENST00000511124 PIP4P2Q8N4L2 257 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 LINC00116Q8NCU8 138 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 NLGN2Q8NFZ4 835 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 GRAPLQ8TC17 118 aaPredicted RBP3.54□□□□□ -1.84
CLOCK-209ENST00000511124 SP7Q8TDD2 431 aaPredicted RBP3.54□□□□□ -1.84
CLOCK-209ENST00000511124 ZNF428Q96B54 188 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 L3MBTL3Q96JM7 780 aaPredicted RBP3.54□□□□□ -1.84
CLOCK-209ENST00000511124 VEZTQ9HBM0 779 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 ZNF287Q9HBT7 754 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 PNMA2Q9UL42 364 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 IVNS1ABPQ9Y6Y0 642 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 NPC1L1Q9UHC9 1359 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 VIRMAQ69YN4 1812 aaKnown RBP3.54□□□□□ -1.84
CLOCK-209ENST00000511124 XDHP47989 1333 aa3.54□□□□□ -1.84
CLOCK-209ENST00000511124 FMNL1O95466 1100 aaPredicted RBP3.53□□□□□ -1.84
CLOCK-209ENST00000511124 RIPK4P57078 832 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 EVX2Q03828 476 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 AIMP1Q12904 312 aaKnown RBP3.53□□□□□ -1.84
CLOCK-209ENST00000511124 IFIT5Q13325 482 aaKnown RBP3.53□□□□□ -1.84
CLOCK-209ENST00000511124 BRDTQ58F21 947 aaPredicted RBP3.53□□□□□ -1.84
CLOCK-209ENST00000511124 HSP90AB4PQ58FF6 505 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 NBPF10Q6P3W6 841 aaKnown RBP3.53□□□□□ -1.84
CLOCK-209ENST00000511124 TRIM47Q96LD4 638 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 COA1Q9GZY4 146 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 SH2D4AQ9H788 454 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 EFCC1Q9HA90 598 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 TOPAZ1Q8N9V7 1692 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 NRKQ7Z2Y5 1582 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 USP17L3A6NCW0 530 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 USP17L4A6NCW7 530 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 TCERG1O14776 1098 aaKnown RBP3.53□□□□□ -1.84
CLOCK-209ENST00000511124 PDE8AO60658 829 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 CYP19A1P11511 503 aaPredicted RBP3.53□□□□□ -1.84
CLOCK-209ENST00000511124 OSBPP22059 807 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 TRAF1Q13077 416 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 TMED8Q6PL24 325 aaPredicted RBP3.53□□□□□ -1.84
CLOCK-209ENST00000511124 USP17L1Q7RTZ2 530 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 ZSCAN29Q8IWY8 852 aaPredicted RBP3.53□□□□□ -1.84
CLOCK-209ENST00000511124 CCDC191Q8NCU4 936 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 ABHD8Q96I13 439 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 GPATCH3Q96I76 525 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 TMOD4Q9NZQ9 345 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 AKAP2Q9Y2D5 859 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 ATP6V0A2Q9Y487 856 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 HLA-DOAP06340 250 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 CHRM1P11229 460 aaPredicted RBP3.53□□□□□ -1.84
CLOCK-209ENST00000511124 SLC5A1P13866 664 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 KIF4BQ2VIQ3 1234 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 FBXO46Q6PJ61 603 aaPredicted RBP3.53□□□□□ -1.84
CLOCK-209ENST00000511124 GIGYF2Q6Y7W6 1299 aaKnown RBP3.53□□□□□ -1.84
CLOCK-209ENST00000511124 FASTKD5Q7L8L6 764 aaKnown RBP3.53□□□□□ -1.84
CLOCK-209ENST00000511124 PLBD2Q8NHP8 589 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 RAET1EQ8TD07 263 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 CABP5Q9NP86 173 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 DDX21Q9NR30 783 aaKnown RBP eCLIP3.53□□□□□ -1.84
CLOCK-209ENST00000511124 CNOT7Q9UIV1 285 aaKnown RBP3.53□□□□□ -1.84
CLOCK-209ENST00000511124 NRXN3Q9Y4C0 1643 aa3.53□□□□□ -1.84
CLOCK-209ENST00000511124 C19orf67A6NJJ6 358 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 HMMRO75330 724 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 BAG3O95817 575 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 CETPP11597 493 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 MYL6BP14649 208 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 CHRNA5P30532 468 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 ZBTB1Q9Y2K1 713 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 POLRMTO00411 1230 aaKnown RBP3.52□□□□□ -1.85
CLOCK-209ENST00000511124 KIF3CO14782 793 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 SLC3A2P08195 630 aaKnown RBP3.52□□□□□ -1.85
CLOCK-209ENST00000511124 GPTP24298 496 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 COPB2P35606 906 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 GTF2A2P52657 109 aa3.52□□□□□ -1.85
CLOCK-209ENST00000511124 PRR5LQ6MZQ0 368 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms