RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 PPEF1O14829 653 aaPredicted RBP14.97□□□□□ -0.01
HMGXB3-203ENST00000510472 SP8Q8IXZ3 490 aa14.97□□□□□ -0.01
HMGXB3-203ENST00000510472 PLA2G12BQ9BX93 195 aa14.97□□□□□ -0.01
HMGXB3-203ENST00000510472 TTLL11Q8NHH1 800 aa14.96□□□□□ -0.01
HMGXB3-203ENST00000510472 CELF1Q92879 486 aaKnown RBP14.96□□□□□ -0.01
HMGXB3-203ENST00000510472 PTPRCP08575 1304 aa14.95□□□□□ -0.02
HMGXB3-203ENST00000510472 ALDH1L1O75891 902 aa14.95□□□□□ -0.02
HMGXB3-203ENST00000510472 RARSP54136 660 aaKnown RBP14.95□□□□□ -0.02
HMGXB3-203ENST00000510472 UBE3BQ7Z3V4 1068 aa14.95□□□□□ -0.02
HMGXB3-203ENST00000510472 TMC4Q7Z404 712 aa14.95□□□□□ -0.02
HMGXB3-203ENST00000510472 BCL2L13Q9BXK5 485 aa14.95□□□□□ -0.02
HMGXB3-203ENST00000510472 RTFDC1Q9BY42 306 aaPredicted RBP14.95□□□□□ -0.02
HMGXB3-203ENST00000510472 ZBED9Q6R2W3 1325 aa14.94□□□□□ -0.02
HMGXB3-203ENST00000510472 CSF1RP07333 972 aa14.94□□□□□ -0.02
HMGXB3-203ENST00000510472 CTSWP56202 376 aa14.94□□□□□ -0.02
HMGXB3-203ENST00000510472 RPS8P62241 208 aaKnown RBP14.94□□□□□ -0.02
HMGXB3-203ENST00000510472 SEC31BQ9NQW1 1179 aa14.94□□□□□ -0.02
HMGXB3-203ENST00000510472 ZNF277Q9NRM2 450 aaPredicted RBP14.94□□□□□ -0.02
HMGXB3-203ENST00000510472 FER1L6Q2WGJ9 1857 aa14.93□□□□□ -0.02
HMGXB3-203ENST00000510472 CACNA1FO60840 1977 aa14.93□□□□□ -0.02
HMGXB3-203ENST00000510472 GLTPD2A6NH11 291 aa14.93□□□□□ -0.02
HMGXB3-203ENST00000510472 CCDC152Q4G0S7 254 aa14.93□□□□□ -0.02
HMGXB3-203ENST00000510472 GPBP1L1Q9HC44 474 aaPredicted RBP14.93□□□□□ -0.02
HMGXB3-203ENST00000510472 SMC4Q9NTJ3 1288 aa14.93□□□□□ -0.02
HMGXB3-203ENST00000510472 GRM8O00222 908 aa14.92□□□□□ -0.02
HMGXB3-203ENST00000510472 KIF3CO14782 793 aa14.92□□□□□ -0.02
HMGXB3-203ENST00000510472 IARSP41252 1262 aaKnown RBP14.92□□□□□ -0.02
HMGXB3-203ENST00000510472 FOXO4P98177 505 aa14.92□□□□□ -0.02
HMGXB3-203ENST00000510472 ZNF526Q8TF50 670 aaPredicted RBP14.92□□□□□ -0.02
HMGXB3-203ENST00000510472 SRCIN1Q9C0H9 1055 aa14.92□□□□□ -0.02
HMGXB3-203ENST00000510472 VPS33BQ9H267 617 aa14.92□□□□□ -0.02
HMGXB3-203ENST00000510472 RTL9Q8NET4 1388 aa14.92□□□□□ -0.02
HMGXB3-203ENST00000510472 DDX60Q8IY21 1712 aaKnown RBP14.92□□□□□ -0.02
HMGXB3-203ENST00000510472 UTYO14607 1347 aa14.92□□□□□ -0.02
HMGXB3-203ENST00000510472 SBF1O95248 1867 aa14.91□□□□□ -0.02
HMGXB3-203ENST00000510472 SLC4A10Q6U841 1118 aa14.91□□□□□ -0.02
HMGXB3-203ENST00000510472 MPNDQ8N594 471 aa14.91□□□□□ -0.02
HMGXB3-203ENST00000510472 GREM2Q9H772 168 aa14.91□□□□□ -0.02
HMGXB3-203ENST00000510472 NOB1Q9ULX3 412 aaKnown RBP14.91□□□□□ -0.02
HMGXB3-203ENST00000510472 COL4A1P02462 1669 aa14.9□□□□□ -0.02
HMGXB3-203ENST00000510472 FZD9O00144 591 aa14.9□□□□□ -0.02
HMGXB3-203ENST00000510472 KAZALD1Q96I82 304 aa14.9□□□□□ -0.02
HMGXB3-203ENST00000510472 CCDC85AQ96PX6 553 aaPredicted RBP14.9□□□□□ -0.02
HMGXB3-203ENST00000510472 NMRK2Q9NPI5 230 aa14.9□□□□□ -0.02
HMGXB3-203ENST00000510472 POTECB2RU33 542 aa14.89□□□□□ -0.03
HMGXB3-203ENST00000510472 EPHA10Q5JZY3 1008 aa14.89□□□□□ -0.03
HMGXB3-203ENST00000510472 DPP8Q6V1X1 898 aaPredicted RBP14.89□□□□□ -0.03
HMGXB3-203ENST00000510472 ARHGAP45Q92619 1136 aa14.89□□□□□ -0.03
HMGXB3-203ENST00000510472 USP44Q9H0E7 712 aa14.89□□□□□ -0.03
HMGXB3-203ENST00000510472 TMX4Q9H1E5 349 aaPredicted RBP14.89□□□□□ -0.03
HMGXB3-203ENST00000510472 PODXL2Q9NZ53 605 aa14.89□□□□□ -0.03
HMGXB3-203ENST00000510472 KDM2BQ8NHM5 1336 aa14.89□□□□□ -0.03
HMGXB3-203ENST00000510472 LAMB2P55268 1798 aa14.88□□□□□ -0.03
HMGXB3-203ENST00000510472 NBPF7P0C2Y1 421 aaPredicted RBP14.88□□□□□ -0.03
HMGXB3-203ENST00000510472 GPSM2P81274 684 aa14.88□□□□□ -0.03
HMGXB3-203ENST00000510472 SUPT20HQ8NEM7 779 aa14.88□□□□□ -0.03
HMGXB3-203ENST00000510472 BSDC1Q9NW68 430 aaPredicted RBP14.88□□□□□ -0.03
HMGXB3-203ENST00000510472 POLLQ9UGP5 575 aa14.88□□□□□ -0.03
HMGXB3-203ENST00000510472 BCAR3O75815 825 aa14.87□□□□□ -0.03
HMGXB3-203ENST00000510472 KIAA2012Q0VF49 1180 aa14.87□□□□□ -0.03
HMGXB3-203ENST00000510472 DPY19L2Q6NUT2 758 aa14.87□□□□□ -0.03
HMGXB3-203ENST00000510472 ANKRD18AQ8IVF6 992 aa14.87□□□□□ -0.03
HMGXB3-203ENST00000510472 CDC5LQ99459 802 aaKnown RBP14.87□□□□□ -0.03
HMGXB3-203ENST00000510472 RRAGCQ9HB90 399 aa14.87□□□□□ -0.03
HMGXB3-203ENST00000510472 C9orf78Q9NZ63 289 aaPredicted RBP14.87□□□□□ -0.03
HMGXB3-203ENST00000510472 NSFL1CQ9UNZ2 370 aaKnown RBP14.87□□□□□ -0.03
HMGXB3-203ENST00000510472 COL4A5P29400 1685 aa14.87□□□□□ -0.03
HMGXB3-203ENST00000510472 DDNO94850 711 aaPredicted RBP14.86□□□□□ -0.03
HMGXB3-203ENST00000510472 ITGA6P23229 1130 aa14.86□□□□□ -0.03
HMGXB3-203ENST00000510472 AOC3Q16853 763 aa14.86□□□□□ -0.03
HMGXB3-203ENST00000510472 FAM161AQ3B820 660 aa14.86□□□□□ -0.03
HMGXB3-203ENST00000510472 LARGE2Q8N3Y3 721 aa14.86□□□□□ -0.03
HMGXB3-203ENST00000510472 TBC1D16Q8TBP0 767 aa14.86□□□□□ -0.03
HMGXB3-203ENST00000510472 SUCLG2Q96I99 432 aa14.86□□□□□ -0.03
HMGXB3-203ENST00000510472 L3MBTL3Q96JM7 780 aaPredicted RBP14.86□□□□□ -0.03
HMGXB3-203ENST00000510472 API5Q9BZZ5 524 aaKnown RBP14.86□□□□□ -0.03
HMGXB3-203ENST00000510472 MINPP1Q9UNW1 487 aa14.86□□□□□ -0.03
HMGXB3-203ENST00000510472 ZNF541Q9H0D2 1346 aa14.86□□□□□ -0.03
HMGXB3-203ENST00000510472 PPIP5K2O43314 1243 aa14.85□□□□□ -0.03
HMGXB3-203ENST00000510472 RABL6Q3YEC7 729 aaPredicted RBP14.85□□□□□ -0.03
HMGXB3-203ENST00000510472 LMBR1LQ6UX01 489 aa14.85□□□□□ -0.03
HMGXB3-203ENST00000510472 JDP2Q8WYK2 163 aa14.85□□□□□ -0.03
HMGXB3-203ENST00000510472 VEGFAP15692 232 aaPredicted RBP14.84□□□□□ -0.03
HMGXB3-203ENST00000510472 CCT4P50991 539 aaKnown RBP14.84□□□□□ -0.03
HMGXB3-203ENST00000510472 DUOX1Q9NRD9 1551 aa14.84□□□□□ -0.03
HMGXB3-203ENST00000510472 KIF16BQ96L93 1317 aa14.84□□□□□ -0.03
HMGXB3-203ENST00000510472 CACNA1SQ13698 1873 aa14.84□□□□□ -0.03
HMGXB3-203ENST00000510472 TAF1P21675 1872 aa14.83□□□□□ -0.04
HMGXB3-203ENST00000510472 TOMM70O94826 608 aa14.83□□□□□ -0.04
HMGXB3-203ENST00000510472 TRIM27P14373 513 aa14.83□□□□□ -0.04
HMGXB3-203ENST00000510472 IFIT5Q13325 482 aaKnown RBP14.83□□□□□ -0.04
HMGXB3-203ENST00000510472 INTS3Q68E01 1043 aaKnown RBP14.83□□□□□ -0.04
HMGXB3-203ENST00000510472 NIM1KQ8IY84 436 aa14.83□□□□□ -0.04
HMGXB3-203ENST00000510472 ANKRD44Q8N8A2 993 aa14.83□□□□□ -0.04
HMGXB3-203ENST00000510472 ZNRF3Q9ULT6 936 aa14.83□□□□□ -0.04
HMGXB3-203ENST00000510472 LRRC37AA6NMS7 1700 aa14.83□□□□□ -0.04
HMGXB3-203ENST00000510472 ANKRD18BA2A2Z9 1011 aa14.82□□□□□ -0.04
HMGXB3-203ENST00000510472 WTIPA6NIX2 430 aaPredicted RBP14.82□□□□□ -0.04
HMGXB3-203ENST00000510472 IPO8O15397 1037 aaKnown RBP14.82□□□□□ -0.04
HMGXB3-203ENST00000510472 IGHMBP2P38935 993 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms