RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 U3KPZ7 1027 aaPredicted RBP6.1□□□□□ -1.43
PHF3-210ENST00000509876 RPS6KA4O75676 772 aa6.09□□□□□ -1.43
PHF3-210ENST00000509876 CDKL5O76039 1030 aa6.09□□□□□ -1.43
PHF3-210ENST00000509876 LDHBP07195 334 aaKnown RBP6.09□□□□□ -1.43
PHF3-210ENST00000509876 NBR1Q14596 966 aa6.09□□□□□ -1.43
PHF3-210ENST00000509876 TXNRD1Q16881 649 aa6.09□□□□□ -1.43
PHF3-210ENST00000509876 CYP46A1Q9Y6A2 500 aa6.09□□□□□ -1.43
PHF3-210ENST00000509876 KAT6BQ8WYB5 2073 aa6.09□□□□□ -1.43
PHF3-210ENST00000509876 GOLIM4O00461 696 aa6.09□□□□□ -1.43
PHF3-210ENST00000509876 PUM3Q15397 648 aaKnown RBP6.09□□□□□ -1.43
PHF3-210ENST00000509876 NAA16Q6N069 864 aaPredicted RBP6.09□□□□□ -1.43
PHF3-210ENST00000509876 KDRP35968 1356 aa6.09□□□□□ -1.43
PHF3-210ENST00000509876 ZFYP08048 801 aaPredicted RBP6.09□□□□□ -1.43
PHF3-210ENST00000509876 NUP133Q8WUM0 1156 aa6.09□□□□□ -1.43
PHF3-210ENST00000509876 SPON1Q9HCB6 807 aa6.09□□□□□ -1.43
PHF3-210ENST00000509876 FOXD4L1Q9NU39 408 aa6.09□□□□□ -1.43
PHF3-210ENST00000509876 PPEF1O14829 653 aaPredicted RBP6.09□□□□□ -1.43
PHF3-210ENST00000509876 SSFA2P28290 1259 aa6.09□□□□□ -1.43
PHF3-210ENST00000509876 HIBADHP31937 336 aaKnown RBP6.09□□□□□ -1.43
PHF3-210ENST00000509876 GRM1Q13255 1194 aa6.09□□□□□ -1.43
PHF3-210ENST00000509876 MPHOSPH6Q99547 160 aaKnown RBP6.09□□□□□ -1.43
PHF3-210ENST00000509876 BICC1Q9H694 974 aaKnown RBP6.09□□□□□ -1.43
PHF3-210ENST00000509876 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.09□□□□□ -1.43
PHF3-210ENST00000509876 ADAMTSL3P82987 1691 aa6.09□□□□□ -1.43
PHF3-210ENST00000509876 CPDO75976 1380 aa6.09□□□□□ -1.43
PHF3-210ENST00000509876 SMARCA5O60264 1052 aaPredicted RBP6.09□□□□□ -1.43
PHF3-210ENST00000509876 PTMAP06454 111 aaKnown RBP6.09□□□□□ -1.43
PHF3-210ENST00000509876 CCDC178Q5BJE1 867 aa6.09□□□□□ -1.43
PHF3-210ENST00000509876 ERVV-1B6SEH8 477 aa6.09□□□□□ -1.44
PHF3-210ENST00000509876 H7C1D1 291 aa6.09□□□□□ -1.44
PHF3-210ENST00000509876 CYP7A1P22680 504 aa6.09□□□□□ -1.44
PHF3-210ENST00000509876 PDE4AP27815 886 aa6.09□□□□□ -1.44
PHF3-210ENST00000509876 SEC63Q9UGP8 760 aaKnown RBP6.09□□□□□ -1.44
PHF3-210ENST00000509876 ATP2B4P23634 1241 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 L1TD1Q5T7N2 865 aaKnown RBP6.08□□□□□ -1.44
PHF3-210ENST00000509876 CERS3Q8IU89 383 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 MEIS3Q99687 375 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 RHPN1Q8TCX5 695 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 CTSWP56202 376 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 CCDC96Q2M329 555 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 IQCA1Q86XH1 822 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 BEGAINQ9BUH8 593 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 EHMT1Q9H9B1 1298 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 HOOK1Q9UJC3 728 aaKnown RBP6.08□□□□□ -1.44
PHF3-210ENST00000509876 NOP58Q9Y2X3 529 aaKnown RBP6.08□□□□□ -1.44
PHF3-210ENST00000509876 MCM2P49736 904 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 PLCB2Q00722 1185 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 ZBTB38Q8NAP3 1195 aaPredicted RBP6.08□□□□□ -1.44
PHF3-210ENST00000509876 C22orf23Q9BZE7 217 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 ZBTB1Q9Y2K1 713 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 CYP27B1O15528 508 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 KCNQ3O43525 872 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 PICALMQ13492 652 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 GCKRQ14397 625 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 EAPPQ56P03 285 aaPredicted RBP6.08□□□□□ -1.44
PHF3-210ENST00000509876 CC2D2BQ6DHV5 1058 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 TNIP1Q15025 636 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 WASF1Q92558 559 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 SNRKQ9NRH2 765 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 USP16Q9Y5T5 823 aa6.08□□□□□ -1.44
PHF3-210ENST00000509876 MAGEB6P1A0A0J9YX57 407 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 EYA2O00167 538 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 ZNF213O14771 459 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 PCCAP05165 728 aaPredicted RBP6.07□□□□□ -1.44
PHF3-210ENST00000509876 GNAT2P19087 354 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 GRIPAP1Q4V328 841 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 WWC2Q6AWC2 1192 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 CCDC24Q8N4L8 307 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 WDR66Q8TBY9 1149 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 TBC1D22AQ8WUA7 517 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 PLEKHF1Q96S99 279 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 NPR1P16066 1061 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 RPS8P62241 208 aaKnown RBP6.07□□□□□ -1.44
PHF3-210ENST00000509876 CCDC93Q567U6 631 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 SLKQ9H2G2 1235 aaPredicted RBP6.07□□□□□ -1.44
PHF3-210ENST00000509876 ATG3Q9NT62 314 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 PIM2Q9P1W9 311 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 IQSEC3Q9UPP2 1182 aaPredicted RBP6.07□□□□□ -1.44
PHF3-210ENST00000509876 ADGRB1O14514 1584 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 RANBP6O60518 1105 aaKnown RBP6.07□□□□□ -1.44
PHF3-210ENST00000509876 HELBQ8NG08 1087 aaPredicted RBP6.07□□□□□ -1.44
PHF3-210ENST00000509876 CUL5Q93034 780 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 WDR78Q5VTH9 848 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 CLEC4GQ6UXB4 293 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 RTKN2Q8IZC4 609 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 IQSEC2Q5JU85 1478 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 TPM2P07951 284 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 MMP10P09238 476 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 HMGB1P09429 215 aaKnown RBP6.07□□□□□ -1.44
PHF3-210ENST00000509876 TFCP2Q12800 502 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 BLOC1S2Q6QNY1 142 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 ANKRD44Q8N8A2 993 aa6.07□□□□□ -1.44
PHF3-210ENST00000509876 COL15A1P39059 1388 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 NEURL1BA8MQ27 555 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 ZBTB7AO95365 584 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 ZNF76P36508 570 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 RABEP1Q15276 862 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 TTLL7Q6ZT98 887 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 USP32Q8NFA0 1604 aa6.06□□□□□ -1.44
PHF3-210ENST00000509876 GIGYF2Q6Y7W6 1299 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms