RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 ZFATQ9P243 1243 aa12.35□□□□□ -0.43
TRAPPC11-206ENST00000509857 POLIQ9UNA4 740 aa12.35□□□□□ -0.43
TRAPPC11-206ENST00000509857 PCSK2P16519 638 aa12.34□□□□□ -0.43
TRAPPC11-206ENST00000509857 CCDC87Q9NVE4 849 aa12.34□□□□□ -0.43
TRAPPC11-206ENST00000509857 SASH3O75995 380 aa12.33□□□□□ -0.44
TRAPPC11-206ENST00000509857 ARHGEF15O94989 841 aa12.33□□□□□ -0.44
TRAPPC11-206ENST00000509857 TARSP26639 723 aaKnown RBP12.33□□□□□ -0.44
TRAPPC11-206ENST00000509857 USP5P45974 858 aa12.33□□□□□ -0.44
TRAPPC11-206ENST00000509857 PDE12Q6L8Q7 609 aaKnown RBP12.33□□□□□ -0.44
TRAPPC11-206ENST00000509857 NLRP13Q86W25 1043 aa12.33□□□□□ -0.44
TRAPPC11-206ENST00000509857 GJD3Q8N144 294 aa12.33□□□□□ -0.44
TRAPPC11-206ENST00000509857 SVOPQ8N4V2 548 aa12.33□□□□□ -0.44
TRAPPC11-206ENST00000509857 AAMPQ13685 434 aa12.32□□□□□ -0.44
TRAPPC11-206ENST00000509857 XKR5Q6UX68 686 aa12.32□□□□□ -0.44
TRAPPC11-206ENST00000509857 RARAP10276 462 aa12.31□□□□□ -0.44
TRAPPC11-206ENST00000509857 MAP3K10Q02779 954 aa12.31□□□□□ -0.44
TRAPPC11-206ENST00000509857 KRT25Q7Z3Z0 450 aa12.31□□□□□ -0.44
TRAPPC11-206ENST00000509857 EDARADDQ8WWZ3 215 aa12.31□□□□□ -0.44
TRAPPC11-206ENST00000509857 GGNBP2Q9H3C7 697 aa12.31□□□□□ -0.44
TRAPPC11-206ENST00000509857 ELOA3CA0A087WX78 387 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC11-206ENST00000509857 ELOA3DA6NLF2 546 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC11-206ENST00000509857 HOXD8P13378 290 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC11-206ENST00000509857 ELOA3BQ3SY89 546 aa12.3□□□□□ -0.44
TRAPPC11-206ENST00000509857 ELOA3Q8NG57 546 aa12.3□□□□□ -0.44
TRAPPC11-206ENST00000509857 BRPF3Q9ULD4 1205 aa12.3□□□□□ -0.44
TRAPPC11-206ENST00000509857 SHISA8B8ZZ34 492 aa12.29□□□□□ -0.44
TRAPPC11-206ENST00000509857 NDUFB5O43674 189 aa12.29□□□□□ -0.44
TRAPPC11-206ENST00000509857 GALNT6Q8NCL4 622 aa12.29□□□□□ -0.44
TRAPPC11-206ENST00000509857 CITED4Q96RK1 184 aa12.29□□□□□ -0.44
TRAPPC11-206ENST00000509857 TLR7Q9NYK1 1049 aaKnown RBP12.29□□□□□ -0.44
TRAPPC11-206ENST00000509857 SOX18P35713 384 aa12.28□□□□□ -0.44
TRAPPC11-206ENST00000509857 ADH7P40394 386 aa12.28□□□□□ -0.44
TRAPPC11-206ENST00000509857 EHHADHQ08426 723 aa12.28□□□□□ -0.44
TRAPPC11-206ENST00000509857 DHX32Q7L7V1 743 aaKnown RBP12.28□□□□□ -0.44
TRAPPC11-206ENST00000509857 BIN2Q9UBW5 565 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC11-206ENST00000509857 MMP20O60882 483 aa12.27□□□□□ -0.45
TRAPPC11-206ENST00000509857 TRPM4Q8TD43 1214 aa12.27□□□□□ -0.45
TRAPPC11-206ENST00000509857 RBCK1Q9BYM8 510 aa12.27□□□□□ -0.45
TRAPPC11-206ENST00000509857 ELP3Q9H9T3 547 aa12.27□□□□□ -0.45
TRAPPC11-206ENST00000509857 ENAMQ9NRM1 1142 aa12.27□□□□□ -0.45
TRAPPC11-206ENST00000509857 GPLD1P80108 840 aa12.26□□□□□ -0.45
TRAPPC11-206ENST00000509857 C8orf34Q49A92 452 aa12.26□□□□□ -0.45
TRAPPC11-206ENST00000509857 SND1Q7KZF4 910 aaKnown RBP eCLIP12.26□□□□□ -0.45
TRAPPC11-206ENST00000509857 ZNF438Q7Z4V0 828 aa12.26□□□□□ -0.45
TRAPPC11-206ENST00000509857 FAM129BQ96TA1 746 aa12.26□□□□□ -0.45
TRAPPC11-206ENST00000509857 UBE2OQ9C0C9 1292 aaKnown RBP12.26□□□□□ -0.45
TRAPPC11-206ENST00000509857 DNAJB12Q9NXW2 375 aaKnown RBP12.26□□□□□ -0.45
TRAPPC11-206ENST00000509857 ABI2Q9NYB9 513 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC11-206ENST00000509857 NRLP54845 237 aa12.25□□□□□ -0.45
TRAPPC11-206ENST00000509857 PCSK7Q16549 785 aa12.25□□□□□ -0.45
TRAPPC11-206ENST00000509857 TTC16Q8NEE8 873 aa12.25□□□□□ -0.45
TRAPPC11-206ENST00000509857 OR13H1Q8NG92 308 aa12.25□□□□□ -0.45
TRAPPC11-206ENST00000509857 TMEM63CQ9P1W3 806 aa12.25□□□□□ -0.45
TRAPPC11-206ENST00000509857 DCTN4Q9UJW0 460 aa12.25□□□□□ -0.45
TRAPPC11-206ENST00000509857 A6NHS1 94 aa12.24□□□□□ -0.45
TRAPPC11-206ENST00000509857 BTBD6Q96KE9 485 aa12.24□□□□□ -0.45
TRAPPC11-206ENST00000509857 STK17AQ9UEE5 414 aa12.24□□□□□ -0.45
TRAPPC11-206ENST00000509857 SLC6A14Q9UN76 642 aa12.24□□□□□ -0.45
TRAPPC11-206ENST00000509857 IGHA2P01877 340 aa12.23□□□□□ -0.45
TRAPPC11-206ENST00000509857 PSAPP07602 524 aa12.23□□□□□ -0.45
TRAPPC11-206ENST00000509857 ALAS2P22557 587 aa12.23□□□□□ -0.45
TRAPPC11-206ENST00000509857 PLAURQ03405 335 aa12.23□□□□□ -0.45
TRAPPC11-206ENST00000509857 PDE3BQ13370 1112 aa12.23□□□□□ -0.45
TRAPPC11-206ENST00000509857 CHSY3Q70JA7 882 aa12.23□□□□□ -0.45
TRAPPC11-206ENST00000509857 ZBTB42B2RXF5 422 aa12.22□□□□□ -0.45
TRAPPC11-206ENST00000509857 HOXB4P17483 251 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC11-206ENST00000509857 TTC39BQ5VTQ0 682 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC11-206ENST00000509857 KANK3Q6NY19 840 aa12.22□□□□□ -0.45
TRAPPC11-206ENST00000509857 STARD13Q9Y3M8 1113 aa12.22□□□□□ -0.45
TRAPPC11-206ENST00000509857 FAM181BA6NEQ2 426 aa12.21□□□□□ -0.45
TRAPPC11-206ENST00000509857 NEDD1Q8NHV4 660 aa12.21□□□□□ -0.45
TRAPPC11-206ENST00000509857 NAGPAQ9UK23 515 aa12.21□□□□□ -0.45
TRAPPC11-206ENST00000509857 CCDC180Q9P1Z9 1646 aa12.2□□□□□ -0.46
TRAPPC11-206ENST00000509857 TNFRSF21O75509 655 aa12.2□□□□□ -0.46
TRAPPC11-206ENST00000509857 TBC1D8BQ0IIM8 1120 aa12.2□□□□□ -0.46
TRAPPC11-206ENST00000509857 SNX29Q8TEQ0 813 aa12.2□□□□□ -0.46
TRAPPC11-206ENST00000509857 CHRDQ9H2X0 955 aa12.2□□□□□ -0.46
TRAPPC11-206ENST00000509857 IGFLR1Q9H665 355 aa12.2□□□□□ -0.46
TRAPPC11-206ENST00000509857 CNTN3Q9P232 1028 aa12.2□□□□□ -0.46
TRAPPC11-206ENST00000509857 ADAMTS8Q9UP79 889 aa12.2□□□□□ -0.46
TRAPPC11-206ENST00000509857 KIF4AO95239 1232 aa12.18□□□□□ -0.46
TRAPPC11-206ENST00000509857 DGKGP49619 791 aa12.18□□□□□ -0.46
TRAPPC11-206ENST00000509857 C20orf204Q6ZNR8 217 aa12.18□□□□□ -0.46
TRAPPC11-206ENST00000509857 ALKBH8Q96BT7 664 aaKnown RBP12.18□□□□□ -0.46
TRAPPC11-206ENST00000509857 DMRTB1Q96MA1 342 aa12.18□□□□□ -0.46
TRAPPC11-206ENST00000509857 GPR182O15218 404 aa12.17□□□□□ -0.46
TRAPPC11-206ENST00000509857 AMPD1P23109 780 aa12.17□□□□□ -0.46
TRAPPC11-206ENST00000509857 MAPK1P28482 360 aa12.17□□□□□ -0.46
TRAPPC11-206ENST00000509857 TMC7Q7Z402 723 aa12.17□□□□□ -0.46
TRAPPC11-206ENST00000509857 C1orf127Q8N9H9 656 aa12.17□□□□□ -0.46
TRAPPC11-206ENST00000509857 PRDM6Q9NQX0 595 aa12.17□□□□□ -0.46
TRAPPC11-206ENST00000509857 FRRS1LQ9P0K9 344 aa12.17□□□□□ -0.46
TRAPPC11-206ENST00000509857 LOC102724428A0A0B4J2F2 783 aa12.16□□□□□ -0.46
TRAPPC11-206ENST00000509857 CYP2E1P05181 493 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC11-206ENST00000509857 SIK1P57059 783 aa12.16□□□□□ -0.46
TRAPPC11-206ENST00000509857 MLLT1Q03111 559 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC11-206ENST00000509857 HYAL2Q12891 473 aa12.16□□□□□ -0.46
TRAPPC11-206ENST00000509857 COL13A1Q5TAT6 717 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC11-206ENST00000509857 FAM35AQ86V20 835 aa12.16□□□□□ -0.46
TRAPPC11-206ENST00000509857 PMEPA1Q969W9 287 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms