RNA–Protein interactions for RNA: ENST00000509805.5

SMN2-209, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2

Gene SMN2, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-209ENST00000509805 PLVAPQ9BX97 442 aa4.45□□□□□ -1.7
SMN2-209ENST00000509805 SUV39H2Q9H5I1 410 aa4.45□□□□□ -1.7
SMN2-209ENST00000509805 QTRT2Q9H974 415 aaKnown RBP4.45□□□□□ -1.7
SMN2-209ENST00000509805 JPH1Q9HDC5 661 aaPredicted RBP4.45□□□□□ -1.7
SMN2-209ENST00000509805 ZMIZ1Q9ULJ6 1067 aa4.45□□□□□ -1.7
SMN2-209ENST00000509805 USP20Q9Y2K6 914 aa4.45□□□□□ -1.7
SMN2-209ENST00000509805 SASH3O75995 380 aa4.44□□□□□ -1.7
SMN2-209ENST00000509805 APBA3O96018 575 aa4.44□□□□□ -1.7
SMN2-209ENST00000509805 CPB1P15086 417 aa4.44□□□□□ -1.7
SMN2-209ENST00000509805 MLLT1Q03111 559 aaPredicted RBP4.44□□□□□ -1.7
SMN2-209ENST00000509805 AAMPQ13685 434 aa4.44□□□□□ -1.7
SMN2-209ENST00000509805 C16orf46Q6P387 395 aa4.44□□□□□ -1.7
SMN2-209ENST00000509805 TREML1Q86YW5 311 aa4.44□□□□□ -1.7
SMN2-209ENST00000509805 MICALL1Q8N3F8 863 aa4.44□□□□□ -1.7
SMN2-209ENST00000509805 C7orf43Q8WVR3 580 aa4.44□□□□□ -1.7
SMN2-209ENST00000509805 HCN2Q9UL51 889 aa4.44□□□□□ -1.7
SMN2-209ENST00000509805 LILRB5O75023 590 aa4.43□□□□□ -1.7
SMN2-209ENST00000509805 PTCD1O75127 700 aaKnown RBP4.43□□□□□ -1.7
SMN2-209ENST00000509805 RGS9O75916 674 aaPredicted RBP4.43□□□□□ -1.7
SMN2-209ENST00000509805 ATG7O95352 703 aa4.43□□□□□ -1.7
SMN2-209ENST00000509805 ATP2B4P23634 1241 aa4.43□□□□□ -1.7
SMN2-209ENST00000509805 BRD2P25440 801 aaKnown RBP4.43□□□□□ -1.7
SMN2-209ENST00000509805 TARSP26639 723 aaKnown RBP4.43□□□□□ -1.7
SMN2-209ENST00000509805 DGKGP49619 791 aa4.43□□□□□ -1.7
SMN2-209ENST00000509805 KCNQ4P56696 695 aa4.43□□□□□ -1.7
SMN2-209ENST00000509805 TRIM28Q13263 835 aaKnown RBP4.43□□□□□ -1.7
SMN2-209ENST00000509805 ELOAQ14241 798 aaKnown RBP4.43□□□□□ -1.7
SMN2-209ENST00000509805 PCSK7Q16549 785 aa4.43□□□□□ -1.7
SMN2-209ENST00000509805 IER5Q5VY09 327 aa4.43□□□□□ -1.7
SMN2-209ENST00000509805 ELMSAN1Q6PJG2 1045 aa4.43□□□□□ -1.7
SMN2-209ENST00000509805 C8orf86Q6ZUL3 223 aa4.43□□□□□ -1.7
SMN2-209ENST00000509805 FAM35AQ86V20 835 aa4.43□□□□□ -1.7
SMN2-209ENST00000509805 GSX2Q9BZM3 304 aa4.43□□□□□ -1.7
SMN2-209ENST00000509805 DNAJB12Q9NXW2 375 aaKnown RBP4.43□□□□□ -1.7
SMN2-209ENST00000509805 SLC6A14Q9UN76 642 aa4.43□□□□□ -1.7
SMN2-209ENST00000509805 BCS1LQ9Y276 419 aa4.43□□□□□ -1.7
SMN2-209ENST00000509805 RTCBQ9Y3I0 505 aaKnown RBP4.43□□□□□ -1.7
SMN2-209ENST00000509805 ADARB2-AS1A8MUL3 147 aa4.42□□□□□ -1.7
SMN2-209ENST00000509805 FAM229AH3BQW9 127 aa4.42□□□□□ -1.7
SMN2-209ENST00000509805 XYLBO75191 536 aa4.42□□□□□ -1.7
SMN2-209ENST00000509805 EIF2AK2P19525 551 aaKnown RBP4.42□□□□□ -1.7
SMN2-209ENST00000509805 COX20Q5RI15 118 aa4.42□□□□□ -1.7
SMN2-209ENST00000509805 PSAPL1Q6NUJ1 521 aa4.42□□□□□ -1.7
SMN2-209ENST00000509805 POTEAQ6S8J7 498 aa4.42□□□□□ -1.7
SMN2-209ENST00000509805 LINC00114Q6XXX2 140 aa4.42□□□□□ -1.7
SMN2-209ENST00000509805 HFE2Q6ZVN8 426 aa4.42□□□□□ -1.7
SMN2-209ENST00000509805 CD163Q86VB7 1156 aa4.42□□□□□ -1.7
SMN2-209ENST00000509805 PIK3R5Q8WYR1 880 aa4.42□□□□□ -1.7
SMN2-209ENST00000509805 TNFRSF25Q93038 417 aa4.42□□□□□ -1.7
SMN2-209ENST00000509805 RBSNQ9H1K0 784 aa4.42□□□□□ -1.7
SMN2-209ENST00000509805 FAM13BQ9NYF5 915 aa4.42□□□□□ -1.7
SMN2-209ENST00000509805 SUPT5HO00267 1087 aaKnown RBP4.41□□□□□ -1.7
SMN2-209ENST00000509805 GHRHP01286 108 aa4.41□□□□□ -1.7
SMN2-209ENST00000509805 ALBP02768 609 aa4.41□□□□□ -1.7
SMN2-209ENST00000509805 PSAPP07602 524 aa4.41□□□□□ -1.7
SMN2-209ENST00000509805 INPP5BP32019 993 aa4.41□□□□□ -1.7
SMN2-209ENST00000509805 RAC1P63000 192 aa4.41□□□□□ -1.7
SMN2-209ENST00000509805 DHX32Q7L7V1 743 aaKnown RBP4.41□□□□□ -1.7
SMN2-209ENST00000509805 SAP130Q9H0E3 1048 aa4.41□□□□□ -1.7
SMN2-209ENST00000509805 CXXC1Q9P0U4 656 aaPredicted RBP4.41□□□□□ -1.7
SMN2-209ENST00000509805 LRFN2Q9ULH4 789 aa4.41□□□□□ -1.7
SMN2-209ENST00000509805 UBAP1LF5GYI3 381 aa4.4□□□□□ -1.71
SMN2-209ENST00000509805 SPATA31C1P0DKV0 1188 aa4.4□□□□□ -1.71
SMN2-209ENST00000509805 PCSK2P16519 638 aa4.4□□□□□ -1.71
SMN2-209ENST00000509805 TTC39BQ5VTQ0 682 aaPredicted RBP4.4□□□□□ -1.71
SMN2-209ENST00000509805 CAPN12Q6ZSI9 719 aa4.4□□□□□ -1.71
SMN2-209ENST00000509805 DMRTC2Q8IXT2 367 aaPredicted RBP4.4□□□□□ -1.71
SMN2-209ENST00000509805 GPR152Q8TDT2 470 aa4.4□□□□□ -1.71
SMN2-209ENST00000509805 TRIM11Q96F44 468 aa4.4□□□□□ -1.71
SMN2-209ENST00000509805 MYO19Q96H55 970 aa4.4□□□□□ -1.71
SMN2-209ENST00000509805 NSUN5Q96P11 429 aaKnown RBP4.4□□□□□ -1.71
SMN2-209ENST00000509805 EFCC1Q9HA90 598 aa4.4□□□□□ -1.71
SMN2-209ENST00000509805 FNDC3AQ9Y2H6 1198 aaKnown RBP4.4□□□□□ -1.71
SMN2-209ENST00000509805 FAM177BA6PVY3 158 aa4.39□□□□□ -1.71
SMN2-209ENST00000509805 ABL1P00519 1130 aa4.39□□□□□ -1.71
SMN2-209ENST00000509805 SCNN1AP37088 669 aa4.39□□□□□ -1.71
SMN2-209ENST00000509805 ZAP70P43403 619 aa4.39□□□□□ -1.71
SMN2-209ENST00000509805 LRP8Q14114 963 aa4.39□□□□□ -1.71
SMN2-209ENST00000509805 OCLNQ16625 522 aa4.39□□□□□ -1.71
SMN2-209ENST00000509805 C8orf34Q49A92 452 aa4.39□□□□□ -1.71
SMN2-209ENST00000509805 ERICH6Q7L0X2 663 aa4.39□□□□□ -1.71
SMN2-209ENST00000509805 ABTB2Q8N961 1025 aa4.39□□□□□ -1.71
SMN2-209ENST00000509805 CLP1Q92989 425 aaKnown RBP4.39□□□□□ -1.71
SMN2-209ENST00000509805 SPACA7Q96KW9 195 aa4.39□□□□□ -1.71
SMN2-209ENST00000509805 NACC1Q96RE7 527 aa4.39□□□□□ -1.71
SMN2-209ENST00000509805 STIM2Q9P246 746 aa4.39□□□□□ -1.71
SMN2-209ENST00000509805 DMGDHQ9UI17 866 aaKnown RBP4.39□□□□□ -1.71
SMN2-209ENST00000509805 USP21Q9UK80 565 aa4.39□□□□□ -1.71
SMN2-209ENST00000509805 MTMR7Q9Y216 660 aa4.39□□□□□ -1.71
SMN2-209ENST00000509805 COL17A1Q9UMD9 1497 aaPredicted RBP4.38□□□□□ -1.71
SMN2-209ENST00000509805 J3QW42 95 aa4.38□□□□□ -1.71
SMN2-209ENST00000509805 OPLAHO14841 1288 aa4.38□□□□□ -1.71
SMN2-209ENST00000509805 PPP1R15AO75807 674 aaPredicted RBP4.38□□□□□ -1.71
SMN2-209ENST00000509805 GATA4P43694 442 aa4.38□□□□□ -1.71
SMN2-209ENST00000509805 PLAURQ03405 335 aa4.38□□□□□ -1.71
SMN2-209ENST00000509805 DNM1Q05193 864 aaKnown RBP4.38□□□□□ -1.71
SMN2-209ENST00000509805 GRIK4Q16099 956 aa4.38□□□□□ -1.71
SMN2-209ENST00000509805 GDF6Q6KF10 455 aaPredicted RBP4.38□□□□□ -1.71
SMN2-209ENST00000509805 ETFBKMTQ8IXQ9 262 aa4.38□□□□□ -1.71
SMN2-209ENST00000509805 SMG9Q9H0W8 520 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms