RNA–Protein interactions for RNA: ENST00000509751.1

HTT-207, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 723 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-207ENST00000509751 SEC31BQ9NQW1 1179 aa19.17■□□□□ 0.66
HTT-207ENST00000509751 BCAR3O75815 825 aa19.16■□□□□ 0.66
HTT-207ENST00000509751 CTSWP56202 376 aa19.16■□□□□ 0.66
HTT-207ENST00000509751 CCDC152Q4G0S7 254 aa19.16■□□□□ 0.66
HTT-207ENST00000509751 ZNF526Q8TF50 670 aaPredicted RBP19.16■□□□□ 0.66
HTT-207ENST00000509751 CELF1Q92879 486 aaKnown RBP19.16■□□□□ 0.66
HTT-207ENST00000509751 TAF1P21675 1872 aa19.16■□□□□ 0.66
HTT-207ENST00000509751 COL4A1P02462 1669 aa19.15■□□□□ 0.66
HTT-207ENST00000509751 ALDH1L1O75891 902 aa19.15■□□□□ 0.66
HTT-207ENST00000509751 LMNB1P20700 586 aa19.15■□□□□ 0.66
HTT-207ENST00000509751 CASP7P55210 303 aa19.15■□□□□ 0.66
HTT-207ENST00000509751 ZNF784Q8NCA9 323 aaPredicted RBP19.15■□□□□ 0.66
HTT-207ENST00000509751 FRAT1Q92837 279 aaPredicted RBP19.15■□□□□ 0.66
HTT-207ENST00000509751 C9orf78Q9NZ63 289 aaPredicted RBP19.15■□□□□ 0.66
HTT-207ENST00000509751 BBOX1O75936 387 aa19.14■□□□□ 0.65
HTT-207ENST00000509751 RTKN2Q8IZC4 609 aa19.14■□□□□ 0.65
HTT-207ENST00000509751 TMX4Q9H1E5 349 aaPredicted RBP19.14■□□□□ 0.65
HTT-207ENST00000509751 ZNF277Q9NRM2 450 aaPredicted RBP19.14■□□□□ 0.65
HTT-207ENST00000509751 ATP6V0A2Q9Y487 856 aa19.14■□□□□ 0.65
HTT-207ENST00000509751 KIF16BQ96L93 1317 aa19.14■□□□□ 0.65
HTT-207ENST00000509751 FER1L6Q2WGJ9 1857 aa19.14■□□□□ 0.65
HTT-207ENST00000509751 GRM8O00222 908 aa19.13■□□□□ 0.65
HTT-207ENST00000509751 FKBP4Q02790 459 aaKnown RBP eCLIP19.13■□□□□ 0.65
HTT-207ENST00000509751 TTLL11Q8NHH1 800 aa19.13■□□□□ 0.65
HTT-207ENST00000509751 API5Q9BZZ5 524 aaKnown RBP19.13■□□□□ 0.65
HTT-207ENST00000509751 GREM2Q9H772 168 aa19.13■□□□□ 0.65
HTT-207ENST00000509751 LTBP3Q9NS15 1303 aa19.12■□□□□ 0.65
HTT-207ENST00000509751 BRPF1P55201 1214 aaPredicted RBP19.12■□□□□ 0.65
HTT-207ENST00000509751 CC2D2BQ6DHV5 1058 aa19.12■□□□□ 0.65
HTT-207ENST00000509751 TNNQ9UQP3 1299 aa19.12■□□□□ 0.65
HTT-207ENST00000509751 SBF1O95248 1867 aa19.11■□□□□ 0.65
HTT-207ENST00000509751 RPS8P62241 208 aaKnown RBP19.11■□□□□ 0.65
HTT-207ENST00000509751 FAM161AQ3B820 660 aa19.11■□□□□ 0.65
HTT-207ENST00000509751 PLA2G12BQ9BX93 195 aa19.11■□□□□ 0.65
HTT-207ENST00000509751 CHMP3Q9Y3E7 222 aa19.11■□□□□ 0.65
HTT-207ENST00000509751 SNED1Q8TER0 1413 aa19.1■□□□□ 0.65
HTT-207ENST00000509751 NBPF7P0C2Y1 421 aaPredicted RBP19.1■□□□□ 0.65
HTT-207ENST00000509751 EPHA10Q5JZY3 1008 aa19.1■□□□□ 0.65
HTT-207ENST00000509751 SP8Q8IXZ3 490 aa19.1■□□□□ 0.65
HTT-207ENST00000509751 SUCLG2Q96I99 432 aa19.1■□□□□ 0.65
HTT-207ENST00000509751 DPP8Q6V1X1 898 aaPredicted RBP19.09■□□□□ 0.65
HTT-207ENST00000509751 ANKRD18AQ8IVF6 992 aa19.09■□□□□ 0.65
HTT-207ENST00000509751 CLUAP1Q96AJ1 413 aa19.09■□□□□ 0.65
HTT-207ENST00000509751 CCDC88AQ3V6T2 1871 aa19.08■□□□□ 0.65
HTT-207ENST00000509751 IPO8O15397 1037 aaKnown RBP19.08■□□□□ 0.64
HTT-207ENST00000509751 ITGA6P23229 1130 aa19.08■□□□□ 0.64
HTT-207ENST00000509751 CCT4P50991 539 aaKnown RBP19.08■□□□□ 0.64
HTT-207ENST00000509751 FOXO4P98177 505 aa19.08■□□□□ 0.64
HTT-207ENST00000509751 TMC4Q7Z404 712 aa19.08■□□□□ 0.64
HTT-207ENST00000509751 MPNDQ8N594 471 aa19.08■□□□□ 0.64
HTT-207ENST00000509751 CDC5LQ99459 802 aaKnown RBP19.08■□□□□ 0.64
HTT-207ENST00000509751 PSMD1Q99460 953 aa19.08■□□□□ 0.64
HTT-207ENST00000509751 MYH3P11055 1940 aa19.08■□□□□ 0.64
HTT-207ENST00000509751 TRIM27P14373 513 aa19.07■□□□□ 0.64
HTT-207ENST00000509751 IARSP41252 1262 aaKnown RBP19.07■□□□□ 0.64
HTT-207ENST00000509751 LMBR1LQ6UX01 489 aa19.07■□□□□ 0.64
HTT-207ENST00000509751 ARHGAP45Q92619 1136 aa19.07■□□□□ 0.64
HTT-207ENST00000509751 NSFL1CQ9UNZ2 370 aaKnown RBP19.07■□□□□ 0.64
HTT-207ENST00000509751 TIAM2Q8IVF5 1701 aa19.07■□□□□ 0.64
HTT-207ENST00000509751 CSF1RP07333 972 aa19.06■□□□□ 0.64
HTT-207ENST00000509751 GPSM2P81274 684 aa19.06■□□□□ 0.64
HTT-207ENST00000509751 ZKSCAN2Q63HK3 967 aa19.06■□□□□ 0.64
HTT-207ENST00000509751 ATF7IPQ6VMQ6 1270 aa19.06■□□□□ 0.64
HTT-207ENST00000509751 USP44Q9H0E7 712 aa19.06■□□□□ 0.64
HTT-207ENST00000509751 GPBP1L1Q9HC44 474 aaPredicted RBP19.06■□□□□ 0.64
HTT-207ENST00000509751 RTL9Q8NET4 1388 aa19.06■□□□□ 0.64
HTT-207ENST00000509751 UTYO14607 1347 aa19.05■□□□□ 0.64
HTT-207ENST00000509751 PPIP5K2O43314 1243 aa19.05■□□□□ 0.64
HTT-207ENST00000509751 AOC3Q16853 763 aa19.05■□□□□ 0.64
HTT-207ENST00000509751 GRIPAP1Q4V328 841 aa19.05■□□□□ 0.64
HTT-207ENST00000509751 LARGE2Q8N3Y3 721 aa19.05■□□□□ 0.64
HTT-207ENST00000509751 KAZALD1Q96I82 304 aa19.05■□□□□ 0.64
HTT-207ENST00000509751 ANKRD18BA2A2Z9 1011 aa19.04■□□□□ 0.64
HTT-207ENST00000509751 LRRC37AA6NMS7 1700 aa19.04■□□□□ 0.64
HTT-207ENST00000509751 IGHMBP2P38935 993 aaKnown RBP19.04■□□□□ 0.64
HTT-207ENST00000509751 GPR101Q96P66 508 aaPredicted RBP19.04■□□□□ 0.64
HTT-207ENST00000509751 BICC1Q9H694 974 aaKnown RBP19.04■□□□□ 0.64
HTT-207ENST00000509751 ANKIB1Q9P2G1 1089 aa19.04■□□□□ 0.64
HTT-207ENST00000509751 SPEF2Q9C093 1822 aa19.03■□□□□ 0.64
HTT-207ENST00000509751 C6orf229H3BNL8 230 aa19.03■□□□□ 0.64
HTT-207ENST00000509751 IFIT5Q13325 482 aaKnown RBP19.03■□□□□ 0.64
HTT-207ENST00000509751 SUPT20HQ8NEM7 779 aa19.03■□□□□ 0.64
HTT-207ENST00000509751 COL4A5P29400 1685 aa19.03■□□□□ 0.64
HTT-207ENST00000509751 ZC3H4Q9UPT8 1303 aaKnown RBP19.02■□□□□ 0.64
HTT-207ENST00000509751 DUOX1Q9NRD9 1551 aa19.02■□□□□ 0.64
HTT-207ENST00000509751 UBTFL1P0CB47 393 aaPredicted RBP19.02■□□□□ 0.64
HTT-207ENST00000509751 TAF7LQ5H9L4 462 aa19.02■□□□□ 0.64
HTT-207ENST00000509751 ANKRD44Q8N8A2 993 aa19.02■□□□□ 0.64
HTT-207ENST00000509751 JDP2Q8WYK2 163 aa19.02■□□□□ 0.64
HTT-207ENST00000509751 ZNF594Q96JF6 807 aaPredicted RBP19.02■□□□□ 0.64
HTT-207ENST00000509751 MPHOSPH8Q99549 860 aa19.02■□□□□ 0.64
HTT-207ENST00000509751 MEIS3Q99687 375 aa19.02■□□□□ 0.64
HTT-207ENST00000509751 RTFDC1Q9BY42 306 aaPredicted RBP19.02■□□□□ 0.64
HTT-207ENST00000509751 NMRK2Q9NPI5 230 aa19.02■□□□□ 0.64
HTT-207ENST00000509751 RIMBP2O15034 1052 aa19.01■□□□□ 0.63
HTT-207ENST00000509751 UFL1O94874 794 aa19.01■□□□□ 0.63
HTT-207ENST00000509751 CCDC57Q2TAC2 916 aa19.01■□□□□ 0.63
HTT-207ENST00000509751 INTS3Q68E01 1043 aaKnown RBP19.01■□□□□ 0.63
HTT-207ENST00000509751 FTSJ3Q8IY81 847 aaKnown RBP19.01■□□□□ 0.63
HTT-207ENST00000509751 TMEM57Q8N5G2 664 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms