RNA–Protein interactions for RNA: ENST00000509589.5

CYSTM1-203, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 3

Gene CYSTM1, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-203ENST00000509589 TRPM4Q8TD43 1214 aa13.56□□□□□ -0.24
CYSTM1-203ENST00000509589 ZNF408Q9H9D4 720 aa13.56□□□□□ -0.24
CYSTM1-203ENST00000509589 TSPYL4Q9UJ04 414 aa13.56□□□□□ -0.24
CYSTM1-203ENST00000509589 DUOX1Q9NRD9 1551 aa13.56□□□□□ -0.24
CYSTM1-203ENST00000509589 KIAA2012Q0VF49 1180 aa13.55□□□□□ -0.24
CYSTM1-203ENST00000509589 AIMP1Q12904 312 aaKnown RBP13.55□□□□□ -0.24
CYSTM1-203ENST00000509589 DLK2Q6UY11 383 aa13.55□□□□□ -0.24
CYSTM1-203ENST00000509589 NLRP10Q86W26 655 aa13.55□□□□□ -0.24
CYSTM1-203ENST00000509589 VPS33BQ9H267 617 aa13.55□□□□□ -0.24
CYSTM1-203ENST00000509589 CASP8AP2Q9UKL3 1982 aa13.54□□□□□ -0.24
CYSTM1-203ENST00000509589 YDJCA8MPS7 323 aa13.54□□□□□ -0.24
CYSTM1-203ENST00000509589 SLC34A2O95436 690 aa13.54□□□□□ -0.24
CYSTM1-203ENST00000509589 MAP2K2P36507 400 aa13.54□□□□□ -0.24
CYSTM1-203ENST00000509589 CIAPIN1Q6FI81 312 aa13.54□□□□□ -0.24
CYSTM1-203ENST00000509589 SP8Q8IXZ3 490 aa13.54□□□□□ -0.24
CYSTM1-203ENST00000509589 MPNDQ8N594 471 aa13.54□□□□□ -0.24
CYSTM1-203ENST00000509589 SUPT20HQ8NEM7 779 aa13.54□□□□□ -0.24
CYSTM1-203ENST00000509589 ZIC5Q96T25 663 aa13.54□□□□□ -0.24
CYSTM1-203ENST00000509589 TMX4Q9H1E5 349 aaPredicted RBP13.54□□□□□ -0.24
CYSTM1-203ENST00000509589 PGAP2Q9UHJ9 254 aa13.54□□□□□ -0.24
CYSTM1-203ENST00000509589 COL4A1P02462 1669 aa13.53□□□□□ -0.24
CYSTM1-203ENST00000509589 BBOX1O75936 387 aa13.53□□□□□ -0.24
CYSTM1-203ENST00000509589 NEUROD2Q15784 382 aa13.53□□□□□ -0.24
CYSTM1-203ENST00000509589 COPS6Q7L5N1 327 aa13.53□□□□□ -0.24
CYSTM1-203ENST00000509589 XAGE3Q8WTP9 111 aa13.53□□□□□ -0.24
CYSTM1-203ENST00000509589 BCL2L13Q9BXK5 485 aa13.53□□□□□ -0.24
CYSTM1-203ENST00000509589 MLLT1Q03111 559 aaPredicted RBP13.52□□□□□ -0.25
CYSTM1-203ENST00000509589 GRAPQ13588 217 aa13.52□□□□□ -0.25
CYSTM1-203ENST00000509589 KRT24Q2M2I5 525 aa13.52□□□□□ -0.25
CYSTM1-203ENST00000509589 GRAPLQ8TC17 118 aaPredicted RBP13.52□□□□□ -0.25
CYSTM1-203ENST00000509589 MCOLN1Q9GZU1 580 aa13.52□□□□□ -0.25
CYSTM1-203ENST00000509589 CNOT7Q9UIV1 285 aaKnown RBP13.52□□□□□ -0.25
CYSTM1-203ENST00000509589 ZBTB12Q9Y330 459 aaPredicted RBP13.52□□□□□ -0.25
CYSTM1-203ENST00000509589 CDHR2Q9BYE9 1310 aa13.52□□□□□ -0.25
CYSTM1-203ENST00000509589 SPEF2Q9C093 1822 aa13.51□□□□□ -0.25
CYSTM1-203ENST00000509589 LRRC37AA6NMS7 1700 aa13.51□□□□□ -0.25
CYSTM1-203ENST00000509589 EGFRP00533 1210 aa13.51□□□□□ -0.25
CYSTM1-203ENST00000509589 RGS19P49795 217 aa13.51□□□□□ -0.25
CYSTM1-203ENST00000509589 BRPF1P55201 1214 aaPredicted RBP13.51□□□□□ -0.25
CYSTM1-203ENST00000509589 RIPK4P57078 832 aa13.51□□□□□ -0.25
CYSTM1-203ENST00000509589 TNIP1Q15025 636 aa13.51□□□□□ -0.25
CYSTM1-203ENST00000509589 DDX46Q7L014 1031 aaKnown RBP13.51□□□□□ -0.25
CYSTM1-203ENST00000509589 USP48Q86UV5 1035 aa13.51□□□□□ -0.25
CYSTM1-203ENST00000509589 MICALL2Q8IY33 904 aa13.51□□□□□ -0.25
CYSTM1-203ENST00000509589 CCDC146Q8IYE0 955 aa13.51□□□□□ -0.25
CYSTM1-203ENST00000509589 ZC3H15Q8WU90 426 aaKnown RBP13.51□□□□□ -0.25
CYSTM1-203ENST00000509589 HHIPL1Q96JK4 782 aa13.51□□□□□ -0.25
CYSTM1-203ENST00000509589 TRMT112Q9UI30 125 aaKnown RBP13.51□□□□□ -0.25
CYSTM1-203ENST00000509589 LAS1LQ9Y4W2 734 aaKnown RBP13.51□□□□□ -0.25
CYSTM1-203ENST00000509589 SH3TC1Q8TE82 1336 aa13.5□□□□□ -0.25
CYSTM1-203ENST00000509589 TCIRG1Q13488 830 aa13.5□□□□□ -0.25
CYSTM1-203ENST00000509589 CDC37L1Q7L3B6 337 aa13.5□□□□□ -0.25
CYSTM1-203ENST00000509589 SAMD7Q7Z3H4 446 aa13.5□□□□□ -0.25
CYSTM1-203ENST00000509589 PSMD14O00487 310 aa13.49□□□□□ -0.25
CYSTM1-203ENST00000509589 CA12O43570 354 aa13.49□□□□□ -0.25
CYSTM1-203ENST00000509589 TBC1D10BQ4KMP7 808 aaPredicted RBP13.49□□□□□ -0.25
CYSTM1-203ENST00000509589 HSP90AB3PQ58FF7 597 aa13.49□□□□□ -0.25
CYSTM1-203ENST00000509589 CELF1Q92879 486 aaKnown RBP13.49□□□□□ -0.25
CYSTM1-203ENST00000509589 CFAP44Q96MT7 982 aa13.49□□□□□ -0.25
CYSTM1-203ENST00000509589 DBNDD1Q9H9R9 158 aa13.49□□□□□ -0.25
CYSTM1-203ENST00000509589 KCNQ5Q9NR82 932 aa13.49□□□□□ -0.25
CYSTM1-203ENST00000509589 ADM5C9JUS6 153 aa13.48□□□□□ -0.25
CYSTM1-203ENST00000509589 H7C1D1 291 aa13.48□□□□□ -0.25
CYSTM1-203ENST00000509589 HUNKP57058 714 aa13.48□□□□□ -0.25
CYSTM1-203ENST00000509589 DGKZQ13574 1117 aa13.48□□□□□ -0.25
CYSTM1-203ENST00000509589 RTL5Q5HYW3 569 aaPredicted RBP13.48□□□□□ -0.25
CYSTM1-203ENST00000509589 CHPF2Q9P2E5 772 aa13.48□□□□□ -0.25
CYSTM1-203ENST00000509589 RTL9Q8NET4 1388 aa13.47□□□□□ -0.25
CYSTM1-203ENST00000509589 FAM155AB1AL88 458 aaPredicted RBP13.47□□□□□ -0.25
CYSTM1-203ENST00000509589 RIMBP2O15034 1052 aa13.47□□□□□ -0.25
CYSTM1-203ENST00000509589 TMPOP42166 694 aaKnown RBP13.47□□□□□ -0.25
CYSTM1-203ENST00000509589 GPSM2P81274 684 aa13.47□□□□□ -0.25
CYSTM1-203ENST00000509589 WASHC4Q2M389 1173 aa13.47□□□□□ -0.25
CYSTM1-203ENST00000509589 FAM89AQ96GI7 184 aa13.47□□□□□ -0.25
CYSTM1-203ENST00000509589 PNNQ9H307 717 aaKnown RBP13.47□□□□□ -0.25
CYSTM1-203ENST00000509589 POLLQ9UGP5 575 aa13.47□□□□□ -0.25
CYSTM1-203ENST00000509589 SCN9AQ15858 1988 aa13.46□□□□□ -0.25
CYSTM1-203ENST00000509589 ATP5J2-PTCD1G3V325 749 aa13.46□□□□□ -0.25
CYSTM1-203ENST00000509589 NOGQ13253 232 aa13.46□□□□□ -0.25
CYSTM1-203ENST00000509589 DOK7Q18PE1 504 aa13.46□□□□□ -0.25
CYSTM1-203ENST00000509589 KRT26Q7Z3Y9 468 aa13.46□□□□□ -0.25
CYSTM1-203ENST00000509589 BABAM1Q9NWV8 329 aa13.46□□□□□ -0.25
CYSTM1-203ENST00000509589 NSFL1CQ9UNZ2 370 aaKnown RBP13.46□□□□□ -0.25
CYSTM1-203ENST00000509589 TNRC18O15417 2968 aaPredicted RBP13.46□□□□□ -0.26
CYSTM1-203ENST00000509589 ASTN2O75129 1339 aaPredicted RBP13.45□□□□□ -0.26
CYSTM1-203ENST00000509589 RBM26Q5T8P6 1007 aaKnown RBP13.45□□□□□ -0.26
CYSTM1-203ENST00000509589 TMC4Q7Z404 712 aa13.45□□□□□ -0.26
CYSTM1-203ENST00000509589 DPF2Q92785 391 aa13.45□□□□□ -0.26
CYSTM1-203ENST00000509589 AKAP11Q9UKA4 1901 aa13.45□□□□□ -0.26
CYSTM1-203ENST00000509589 C6orf229H3BNL8 230 aa13.44□□□□□ -0.26
CYSTM1-203ENST00000509589 CHL1O00533 1208 aa13.44□□□□□ -0.26
CYSTM1-203ENST00000509589 ECE2O60344 883 aa13.44□□□□□ -0.26
CYSTM1-203ENST00000509589 SF3B3Q15393 1217 aaKnown RBP13.44□□□□□ -0.26
CYSTM1-203ENST00000509589 RGMBQ6NW40 437 aa13.44□□□□□ -0.26
CYSTM1-203ENST00000509589 PLBD2Q8NHP8 589 aa13.44□□□□□ -0.26
CYSTM1-203ENST00000509589 ISCA1Q9BUE6 129 aa13.44□□□□□ -0.26
CYSTM1-203ENST00000509589 GBA2Q9HCG7 927 aaPredicted RBP13.44□□□□□ -0.26
CYSTM1-203ENST00000509589 KIF23Q02241 960 aaPredicted RBP13.43□□□□□ -0.26
CYSTM1-203ENST00000509589 LMOD3Q0VAK6 560 aa13.43□□□□□ -0.26
CYSTM1-203ENST00000509589 HDGFL1Q5TGJ6 251 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms