RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 FOXO4P98177 505 aa18.56■□□□□ 0.56
RNF4-213ENST00000509388 CRY2Q49AN0 593 aa18.56■□□□□ 0.56
RNF4-213ENST00000509388 STYK1Q6J9G0 422 aa18.56■□□□□ 0.56
RNF4-213ENST00000509388 TTLL11Q8NHH1 800 aa18.56■□□□□ 0.56
RNF4-213ENST00000509388 CNKSR1Q969H4 720 aa18.56■□□□□ 0.56
RNF4-213ENST00000509388 NRXN2Q9P2S2 1712 aa18.56■□□□□ 0.56
RNF4-213ENST00000509388 NEFLP07196 543 aa18.55■□□□□ 0.56
RNF4-213ENST00000509388 CSF1RP07333 972 aa18.55■□□□□ 0.56
RNF4-213ENST00000509388 IRX6P78412 446 aaPredicted RBP18.55■□□□□ 0.56
RNF4-213ENST00000509388 CCDC57Q2TAC2 916 aa18.55■□□□□ 0.56
RNF4-213ENST00000509388 EPHA10Q5JZY3 1008 aa18.55■□□□□ 0.56
RNF4-213ENST00000509388 NLGN2Q8NFZ4 835 aa18.55■□□□□ 0.56
RNF4-213ENST00000509388 PIM2Q9P1W9 311 aa18.55■□□□□ 0.56
RNF4-213ENST00000509388 ANKRD18BA2A2Z9 1011 aa18.54■□□□□ 0.56
RNF4-213ENST00000509388 HOXA10P31260 410 aaPredicted RBP18.54■□□□□ 0.56
RNF4-213ENST00000509388 IFIT5Q13325 482 aaKnown RBP18.54■□□□□ 0.56
RNF4-213ENST00000509388 TAF7LQ5H9L4 462 aa18.54■□□□□ 0.56
RNF4-213ENST00000509388 KAZALD1Q96I82 304 aa18.54■□□□□ 0.56
RNF4-213ENST00000509388 GREM2Q9H772 168 aa18.54■□□□□ 0.56
RNF4-213ENST00000509388 C1orf115Q9H7X2 142 aa18.54■□□□□ 0.56
RNF4-213ENST00000509388 RABL6Q3YEC7 729 aaPredicted RBP18.53■□□□□ 0.56
RNF4-213ENST00000509388 TTLL6Q8N841 843 aa18.53■□□□□ 0.56
RNF4-213ENST00000509388 CRAMP1Q96RY5 1269 aa18.53■□□□□ 0.56
RNF4-213ENST00000509388 CDC5LQ99459 802 aaKnown RBP18.53■□□□□ 0.56
RNF4-213ENST00000509388 TMX4Q9H1E5 349 aaPredicted RBP18.53■□□□□ 0.56
RNF4-213ENST00000509388 ZBTB40Q9NUA8 1239 aa18.53■□□□□ 0.56
RNF4-213ENST00000509388 LRP5O75197 1615 aa18.52■□□□□ 0.56
RNF4-213ENST00000509388 ITGA6P23229 1130 aa18.52■□□□□ 0.56
RNF4-213ENST00000509388 FAM161AQ3B820 660 aa18.52■□□□□ 0.56
RNF4-213ENST00000509388 DALRD3Q5D0E6 543 aaKnown RBP18.52■□□□□ 0.56
RNF4-213ENST00000509388 ANKRD44Q8N8A2 993 aa18.52■□□□□ 0.56
RNF4-213ENST00000509388 WWC3Q9ULE0 1092 aa18.52■□□□□ 0.56
RNF4-213ENST00000509388 SRGAP3O43295 1099 aa18.51■□□□□ 0.55
RNF4-213ENST00000509388 BBOX1O75936 387 aa18.51■□□□□ 0.55
RNF4-213ENST00000509388 IGHMBP2P38935 993 aaKnown RBP18.51■□□□□ 0.55
RNF4-213ENST00000509388 GRAPQ13588 217 aa18.51■□□□□ 0.55
RNF4-213ENST00000509388 ANKRD18AQ8IVF6 992 aa18.51■□□□□ 0.55
RNF4-213ENST00000509388 GRAPLQ8TC17 118 aaPredicted RBP18.51■□□□□ 0.55
RNF4-213ENST00000509388 SEC31BQ9NQW1 1179 aa18.51■□□□□ 0.55
RNF4-213ENST00000509388 KCNA3P22001 575 aa18.5■□□□□ 0.55
RNF4-213ENST00000509388 RPS8P62241 208 aaKnown RBP18.5■□□□□ 0.55
RNF4-213ENST00000509388 AAMPQ13685 434 aa18.5■□□□□ 0.55
RNF4-213ENST00000509388 PELP1Q8IZL8 1130 aaKnown RBP18.5■□□□□ 0.55
RNF4-213ENST00000509388 EXOC6Q8TAG9 804 aa18.5■□□□□ 0.55
RNF4-213ENST00000509388 MPHOSPH8Q99549 860 aa18.5■□□□□ 0.55
RNF4-213ENST00000509388 BCS1LQ9Y276 419 aa18.5■□□□□ 0.55
RNF4-213ENST00000509388 RPAP2Q8IXW5 612 aaPredicted RBP18.49■□□□□ 0.55
RNF4-213ENST00000509388 CELF1Q92879 486 aaKnown RBP18.49■□□□□ 0.55
RNF4-213ENST00000509388 RTL9Q8NET4 1388 aa18.49■□□□□ 0.55
RNF4-213ENST00000509388 N4BP2Q86UW6 1770 aaPredicted RBP18.49■□□□□ 0.55
RNF4-213ENST00000509388 TNRC6CQ9HCJ0 1690 aaKnown RBP18.48■□□□□ 0.55
RNF4-213ENST00000509388 PPEF1O14829 653 aaPredicted RBP18.48■□□□□ 0.55
RNF4-213ENST00000509388 ATP8B2P98198 1209 aa18.48■□□□□ 0.55
RNF4-213ENST00000509388 PRPF40BQ6NWY9 871 aaKnown RBP18.48■□□□□ 0.55
RNF4-213ENST00000509388 TMC4Q7Z404 712 aa18.48■□□□□ 0.55
RNF4-213ENST00000509388 ZNF219Q9P2Y4 722 aaPredicted RBP18.48■□□□□ 0.55
RNF4-213ENST00000509388 HMMRO75330 724 aa18.47■□□□□ 0.55
RNF4-213ENST00000509388 MTX1Q13505 466 aa18.47■□□□□ 0.55
RNF4-213ENST00000509388 CEP85Q6P2H3 762 aa18.47■□□□□ 0.55
RNF4-213ENST00000509388 DDX60Q8IY21 1712 aaKnown RBP18.46■□□□□ 0.55
RNF4-213ENST00000509388 ANKRD31Q8N7Z5 1873 aa18.46■□□□□ 0.55
RNF4-213ENST00000509388 DCAF8L1A6NGE4 600 aa18.46■□□□□ 0.55
RNF4-213ENST00000509388 LDHAL6AQ6ZMR3 332 aa18.46■□□□□ 0.55
RNF4-213ENST00000509388 ZNF594Q96JF6 807 aaPredicted RBP18.46■□□□□ 0.55
RNF4-213ENST00000509388 CNNM1Q9NRU3 951 aa18.46■□□□□ 0.55
RNF4-213ENST00000509388 KIF13BQ9NQT8 1826 aa18.45■□□□□ 0.54
RNF4-213ENST00000509388 GPR162Q16538 588 aa18.45■□□□□ 0.54
RNF4-213ENST00000509388 SOGA3Q5TF21 947 aa18.45■□□□□ 0.54
RNF4-213ENST00000509388 PNMA6EA0A0J9YXQ4 647 aa18.44■□□□□ 0.54
RNF4-213ENST00000509388 C21orf2O43822 256 aa18.44■□□□□ 0.54
RNF4-213ENST00000509388 CC2D2BQ6DHV5 1058 aa18.44■□□□□ 0.54
RNF4-213ENST00000509388 SP8Q8IXZ3 490 aa18.44■□□□□ 0.54
RNF4-213ENST00000509388 BSDC1Q9NW68 430 aaPredicted RBP18.44■□□□□ 0.54
RNF4-213ENST00000509388 ATP6V0A2Q9Y487 856 aa18.44■□□□□ 0.54
RNF4-213ENST00000509388 LAMB2P55268 1798 aa18.44■□□□□ 0.54
RNF4-213ENST00000509388 KLHDC4Q8TBB5 520 aa18.43■□□□□ 0.54
RNF4-213ENST00000509388 SSH3Q8TE77 659 aa18.43■□□□□ 0.54
RNF4-213ENST00000509388 RFX5P48382 616 aaPredicted RBP18.42■□□□□ 0.54
RNF4-213ENST00000509388 PTPN12Q05209 780 aaKnown RBP18.42■□□□□ 0.54
RNF4-213ENST00000509388 G3BP1Q13283 466 aaKnown RBP eCLIP18.42■□□□□ 0.54
RNF4-213ENST00000509388 GRIPAP1Q4V328 841 aa18.42■□□□□ 0.54
RNF4-213ENST00000509388 CCDC93Q567U6 631 aa18.42■□□□□ 0.54
RNF4-213ENST00000509388 SIL1Q9H173 461 aa18.42■□□□□ 0.54
RNF4-213ENST00000509388 COPRSQ9NQ92 184 aa18.42■□□□□ 0.54
RNF4-213ENST00000509388 SURF6O75683 361 aaKnown RBP18.41■□□□□ 0.54
RNF4-213ENST00000509388 OS9Q13438 667 aaPredicted RBP18.41■□□□□ 0.54
RNF4-213ENST00000509388 POLA2Q14181 598 aa18.41■□□□□ 0.54
RNF4-213ENST00000509388 ANKRD2Q9GZV1 360 aa18.41■□□□□ 0.54
RNF4-213ENST00000509388 ANKIB1Q9P2G1 1089 aa18.41■□□□□ 0.54
RNF4-213ENST00000509388 FBXO3Q9UK99 471 aa18.41■□□□□ 0.54
RNF4-213ENST00000509388 NSFL1CQ9UNZ2 370 aaKnown RBP18.41■□□□□ 0.54
RNF4-213ENST00000509388 PA2G4Q9UQ80 394 aaKnown RBP18.41■□□□□ 0.54
RNF4-213ENST00000509388 PCDHB15Q9Y5E8 787 aa18.41■□□□□ 0.54
RNF4-213ENST00000509388 EYA2O00167 538 aa18.4■□□□□ 0.54
RNF4-213ENST00000509388 RTKN2Q8IZC4 609 aa18.4■□□□□ 0.54
RNF4-213ENST00000509388 C7orf43Q8WVR3 580 aa18.4■□□□□ 0.54
RNF4-213ENST00000509388 PUS3Q9BZE2 481 aaKnown RBP18.4■□□□□ 0.54
RNF4-213ENST00000509388 MINPP1Q9UNW1 487 aa18.4■□□□□ 0.54
RNF4-213ENST00000509388 COL11A2P13942 1736 aaPredicted RBP18.4■□□□□ 0.54
RNF4-213ENST00000509388 GRIN3BO60391 1043 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms