RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 HSP90AB3PQ58FF7 597 aa14.18□□□□□ -0.14
RNF4-212ENST00000509258 PHAXQ9H814 394 aaKnown RBP14.18□□□□□ -0.14
RNF4-212ENST00000509258 ABT1Q9ULW3 272 aaKnown RBP14.18□□□□□ -0.14
RNF4-212ENST00000509258 ATP6V0A2Q9Y487 856 aa14.18□□□□□ -0.14
RNF4-212ENST00000509258 ABCC4O15439 1325 aa14.17□□□□□ -0.14
RNF4-212ENST00000509258 TSR2Q969E8 191 aaKnown RBP14.17□□□□□ -0.14
RNF4-212ENST00000509258 ISCA1Q9BUE6 129 aa14.17□□□□□ -0.14
RNF4-212ENST00000509258 VPS33BQ9H267 617 aa14.17□□□□□ -0.14
RNF4-212ENST00000509258 SPEF2Q9C093 1822 aa14.17□□□□□ -0.14
RNF4-212ENST00000509258 MYH3P11055 1940 aa14.16□□□□□ -0.14
RNF4-212ENST00000509258 GNAI1P63096 354 aa14.16□□□□□ -0.14
RNF4-212ENST00000509258 DEFB115Q30KQ5 88 aa14.16□□□□□ -0.14
RNF4-212ENST00000509258 USP50Q70EL3 339 aaPredicted RBP14.16□□□□□ -0.14
RNF4-212ENST00000509258 SUPT20HQ8NEM7 779 aa14.16□□□□□ -0.14
RNF4-212ENST00000509258 PLBD2Q8NHP8 589 aa14.16□□□□□ -0.14
RNF4-212ENST00000509258 WBP1LQ9NX94 342 aa14.16□□□□□ -0.14
RNF4-212ENST00000509258 DBF4Q9UBU7 674 aaPredicted RBP14.16□□□□□ -0.14
RNF4-212ENST00000509258 CACNA1FO60840 1977 aa14.16□□□□□ -0.14
RNF4-212ENST00000509258 EPS15P42566 896 aa14.15□□□□□ -0.14
RNF4-212ENST00000509258 AOC3Q16853 763 aa14.15□□□□□ -0.14
RNF4-212ENST00000509258 ANKRD13DQ6ZTN6 518 aa14.15□□□□□ -0.14
RNF4-212ENST00000509258 TRMT112Q9UI30 125 aaKnown RBP14.15□□□□□ -0.14
RNF4-212ENST00000509258 BBOX1O75936 387 aa14.14□□□□□ -0.15
RNF4-212ENST00000509258 MAP2K1Q02750 393 aaPredicted RBP14.14□□□□□ -0.15
RNF4-212ENST00000509258 RTL5Q5HYW3 569 aaPredicted RBP14.14□□□□□ -0.15
RNF4-212ENST00000509258 DPP8Q6V1X1 898 aaPredicted RBP14.14□□□□□ -0.15
RNF4-212ENST00000509258 WWC1Q8IX03 1113 aa14.14□□□□□ -0.15
RNF4-212ENST00000509258 FAM89AQ96GI7 184 aa14.14□□□□□ -0.15
RNF4-212ENST00000509258 RTFDC1Q9BY42 306 aaPredicted RBP14.14□□□□□ -0.15
RNF4-212ENST00000509258 MRS2Q9HD23 443 aa14.14□□□□□ -0.15
RNF4-212ENST00000509258 ADARB2Q9NS39 739 aaKnown RBP14.14□□□□□ -0.15
RNF4-212ENST00000509258 GPRC5DQ9NZD1 345 aa14.14□□□□□ -0.15
RNF4-212ENST00000509258 ZNRF3Q9ULT6 936 aa14.14□□□□□ -0.15
RNF4-212ENST00000509258 THSD7BQ9C0I4 1608 aa14.14□□□□□ -0.15
RNF4-212ENST00000509258 SH3TC1Q8TE82 1336 aa14.14□□□□□ -0.15
RNF4-212ENST00000509258 CDHR2Q9BYE9 1310 aa14.14□□□□□ -0.15
RNF4-212ENST00000509258 WDR33Q9C0J8 1336 aaKnown RBP14.14□□□□□ -0.15
RNF4-212ENST00000509258 DDX46Q7L014 1031 aaKnown RBP14.13□□□□□ -0.15
RNF4-212ENST00000509258 JARID2Q92833 1246 aaPredicted RBP14.13□□□□□ -0.15
RNF4-212ENST00000509258 HYPKQ9NX55 129 aa14.13□□□□□ -0.15
RNF4-212ENST00000509258 SCN9AQ15858 1988 aa14.13□□□□□ -0.15
RNF4-212ENST00000509258 ECE1P42892 770 aa14.12□□□□□ -0.15
RNF4-212ENST00000509258 LBX1P52954 281 aa14.12□□□□□ -0.15
RNF4-212ENST00000509258 KIAA2012Q0VF49 1180 aa14.12□□□□□ -0.15
RNF4-212ENST00000509258 PAXIP1Q6ZW49 1069 aaPredicted RBP14.12□□□□□ -0.15
RNF4-212ENST00000509258 TMC4Q7Z404 712 aa14.12□□□□□ -0.15
RNF4-212ENST00000509258 SP8Q8IXZ3 490 aa14.12□□□□□ -0.15
RNF4-212ENST00000509258 MPNDQ8N594 471 aa14.12□□□□□ -0.15
RNF4-212ENST00000509258 CXCL9Q07325 125 aa14.11□□□□□ -0.15
RNF4-212ENST00000509258 GRAPQ13588 217 aa14.11□□□□□ -0.15
RNF4-212ENST00000509258 CCDC27Q2M243 656 aa14.11□□□□□ -0.15
RNF4-212ENST00000509258 G2E3Q7L622 706 aa14.11□□□□□ -0.15
RNF4-212ENST00000509258 GRAPLQ8TC17 118 aaPredicted RBP14.11□□□□□ -0.15
RNF4-212ENST00000509258 CELF1Q92879 486 aaKnown RBP14.11□□□□□ -0.15
RNF4-212ENST00000509258 SPINK5Q9NQ38 1064 aaPredicted RBP14.11□□□□□ -0.15
RNF4-212ENST00000509258 SALL2Q9Y467 1007 aaPredicted RBP14.11□□□□□ -0.15
RNF4-212ENST00000509258 TRAF5O00463 557 aa14.1□□□□□ -0.15
RNF4-212ENST00000509258 ANP32CO43423 234 aa14.1□□□□□ -0.15
RNF4-212ENST00000509258 HSPA8P11142 646 aaKnown RBP14.1□□□□□ -0.15
RNF4-212ENST00000509258 GMPSP49915 693 aaPredicted RBP14.1□□□□□ -0.15
RNF4-212ENST00000509258 CALD1Q05682 793 aaKnown RBP14.1□□□□□ -0.15
RNF4-212ENST00000509258 CIAPIN1Q6FI81 312 aa14.1□□□□□ -0.15
RNF4-212ENST00000509258 CAPNS2Q96L46 248 aa14.1□□□□□ -0.15
RNF4-212ENST00000509258 MYD88Q99836 296 aa14.1□□□□□ -0.15
RNF4-212ENST00000509258 BEGAINQ9BUH8 593 aa14.1□□□□□ -0.15
RNF4-212ENST00000509258 POLR2AP24928 1970 aaKnown RBP14.1□□□□□ -0.15
RNF4-212ENST00000509258 FMR1Q06787 632 aaKnown RBP eCLIP14.09□□□□□ -0.15
RNF4-212ENST00000509258 TRIM28Q13263 835 aaKnown RBP14.09□□□□□ -0.15
RNF4-212ENST00000509258 TNIP1Q15025 636 aa14.09□□□□□ -0.15
RNF4-212ENST00000509258 CST9Q5W186 159 aa14.09□□□□□ -0.15
RNF4-212ENST00000509258 RIC3Q7Z5B4 369 aa14.09□□□□□ -0.15
RNF4-212ENST00000509258 BCL2L13Q9BXK5 485 aa14.09□□□□□ -0.15
RNF4-212ENST00000509258 TLL2Q9Y6L7 1015 aa14.09□□□□□ -0.15
RNF4-212ENST00000509258 TRPM7Q96QT4 1865 aa14.08□□□□□ -0.16
RNF4-212ENST00000509258 IRS4O14654 1257 aaPredicted RBP14.08□□□□□ -0.16
RNF4-212ENST00000509258 GRM1Q13255 1194 aa14.08□□□□□ -0.16
RNF4-212ENST00000509258 SF3B3Q15393 1217 aaKnown RBP14.08□□□□□ -0.16
RNF4-212ENST00000509258 CYP4F22Q6NT55 531 aa14.08□□□□□ -0.16
RNF4-212ENST00000509258 ZC3H15Q8WU90 426 aaKnown RBP14.08□□□□□ -0.16
RNF4-212ENST00000509258 GPR101Q96P66 508 aaPredicted RBP14.08□□□□□ -0.16
RNF4-212ENST00000509258 FANCIQ9NVI1 1328 aa14.08□□□□□ -0.16
RNF4-212ENST00000509258 ZNF646O15015 1829 aaPredicted RBP14.08□□□□□ -0.16
RNF4-212ENST00000509258 PSME4Q14997 1843 aa14.08□□□□□ -0.16
RNF4-212ENST00000509258 RAD17O75943 681 aa14.07□□□□□ -0.16
RNF4-212ENST00000509258 CELF2O95319 508 aaKnown RBP14.07□□□□□ -0.16
RNF4-212ENST00000509258 IGKV5-2P06315 115 aa14.07□□□□□ -0.16
RNF4-212ENST00000509258 GOLGA2Q08379 1002 aa14.07□□□□□ -0.16
RNF4-212ENST00000509258 METTL22Q9BUU2 404 aaPredicted RBP14.07□□□□□ -0.16
RNF4-212ENST00000509258 CHMP4AQ9BY43 222 aa14.07□□□□□ -0.16
RNF4-212ENST00000509258 SEC31BQ9NQW1 1179 aa14.07□□□□□ -0.16
RNF4-212ENST00000509258 MAP3K2Q9Y2U5 619 aa14.07□□□□□ -0.16
RNF4-212ENST00000509258 A0A1B0GUL6 1792 aa14.06□□□□□ -0.16
RNF4-212ENST00000509258 HSP90B1P14625 803 aaKnown RBP14.06□□□□□ -0.16
RNF4-212ENST00000509258 MAP2K2P36507 400 aa14.06□□□□□ -0.16
RNF4-212ENST00000509258 TWISTNBQ3B726 338 aaPredicted RBP14.06□□□□□ -0.16
RNF4-212ENST00000509258 CCDC30Q5VVM6 783 aa14.06□□□□□ -0.16
RNF4-212ENST00000509258 SAPCD2Q86UD0 394 aa14.06□□□□□ -0.16
RNF4-212ENST00000509258 ZBTB38Q8NAP3 1195 aaPredicted RBP14.06□□□□□ -0.16
RNF4-212ENST00000509258 HHIPL1Q96JK4 782 aa14.06□□□□□ -0.16
RNF4-212ENST00000509258 PGAP2Q9UHJ9 254 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms