RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 SAPCD2Q86UD0 394 aa21.06■□□□□ 0.96
CXCL1-202ENST00000509101 CDHR2Q9BYE9 1310 aa21.05■□□□□ 0.96
CXCL1-202ENST00000509101 RAD17O75943 681 aa21.05■□□□□ 0.96
CXCL1-202ENST00000509101 HCLS1P14317 486 aaPredicted RBP21.05■□□□□ 0.96
CXCL1-202ENST00000509101 MPNDQ8N594 471 aa21.05■□□□□ 0.96
CXCL1-202ENST00000509101 BCL2L13Q9BXK5 485 aa21.05■□□□□ 0.96
CXCL1-202ENST00000509101 ZNF408Q9H9D4 720 aa21.05■□□□□ 0.96
CXCL1-202ENST00000509101 MAP2K2P36507 400 aa21.04■□□□□ 0.96
CXCL1-202ENST00000509101 KIAA2012Q0VF49 1180 aa21.04■□□□□ 0.96
CXCL1-202ENST00000509101 SP8Q8IXZ3 490 aa21.04■□□□□ 0.96
CXCL1-202ENST00000509101 AIMP1Q12904 312 aaKnown RBP21.03■□□□□ 0.96
CXCL1-202ENST00000509101 NLRP10Q86W26 655 aa21.03■□□□□ 0.96
CXCL1-202ENST00000509101 TRPM4Q8TD43 1214 aa21.03■□□□□ 0.96
CXCL1-202ENST00000509101 NECTIN2Q92692 538 aa21.03■□□□□ 0.96
CXCL1-202ENST00000509101 PNNQ9H307 717 aaKnown RBP21.03■□□□□ 0.96
CXCL1-202ENST00000509101 BBOX1O75936 387 aa21.02■□□□□ 0.96
CXCL1-202ENST00000509101 HSP90AB3PQ58FF7 597 aa21.02■□□□□ 0.96
CXCL1-202ENST00000509101 DDX46Q7L014 1031 aaKnown RBP21.02■□□□□ 0.96
CXCL1-202ENST00000509101 POLR2AP24928 1970 aaKnown RBP21.02■□□□□ 0.96
CXCL1-202ENST00000509101 SHTN1A0MZ66 631 aa21.01■□□□□ 0.95
CXCL1-202ENST00000509101 HIRAP54198 1017 aaPredicted RBP21.01■□□□□ 0.95
CXCL1-202ENST00000509101 GRAPQ13588 217 aa21.01■□□□□ 0.95
CXCL1-202ENST00000509101 TNIP1Q15025 636 aa21.01■□□□□ 0.95
CXCL1-202ENST00000509101 COPS6Q7L5N1 327 aa21.01■□□□□ 0.95
CXCL1-202ENST00000509101 GRAPLQ8TC17 118 aaPredicted RBP21.01■□□□□ 0.95
CXCL1-202ENST00000509101 XAGE3Q8WTP9 111 aa21.01■□□□□ 0.95
CXCL1-202ENST00000509101 PGAP2Q9UHJ9 254 aa21.01■□□□□ 0.95
CXCL1-202ENST00000509101 TRMT112Q9UI30 125 aaKnown RBP21.01■□□□□ 0.95
CXCL1-202ENST00000509101 YDJCA8MPS7 323 aa21■□□□□ 0.95
CXCL1-202ENST00000509101 BRPF1P55201 1214 aaPredicted RBP21■□□□□ 0.95
CXCL1-202ENST00000509101 RIPK4P57078 832 aa21■□□□□ 0.95
CXCL1-202ENST00000509101 ZNF428Q96B54 188 aa21■□□□□ 0.95
CXCL1-202ENST00000509101 HHIPL1Q96JK4 782 aa21■□□□□ 0.95
CXCL1-202ENST00000509101 SH3TC1Q8TE82 1336 aa21■□□□□ 0.95
CXCL1-202ENST00000509101 COL4A1P02462 1669 aa20.99■□□□□ 0.95
CXCL1-202ENST00000509101 CA12O43570 354 aa20.99■□□□□ 0.95
CXCL1-202ENST00000509101 MLLT1Q03111 559 aaPredicted RBP20.99■□□□□ 0.95
CXCL1-202ENST00000509101 ZC3H15Q8WU90 426 aaKnown RBP20.99■□□□□ 0.95
CXCL1-202ENST00000509101 CNOT7Q9UIV1 285 aaKnown RBP20.99■□□□□ 0.95
CXCL1-202ENST00000509101 SLC34A2O95436 690 aa20.98■□□□□ 0.95
CXCL1-202ENST00000509101 CDC37L1Q7L3B6 337 aa20.98■□□□□ 0.95
CXCL1-202ENST00000509101 MICALL2Q8IY33 904 aa20.98■□□□□ 0.95
CXCL1-202ENST00000509101 MCOLN1Q9GZU1 580 aa20.98■□□□□ 0.95
CXCL1-202ENST00000509101 TCIRG1Q13488 830 aa20.97■□□□□ 0.95
CXCL1-202ENST00000509101 CFAP44Q96MT7 982 aa20.97■□□□□ 0.95
CXCL1-202ENST00000509101 H7C1D1 291 aa20.96■□□□□ 0.95
CXCL1-202ENST00000509101 BABAM1Q9NWV8 329 aa20.96■□□□□ 0.95
CXCL1-202ENST00000509101 ZBTB12Q9Y330 459 aaPredicted RBP20.96■□□□□ 0.95
CXCL1-202ENST00000509101 RGS19P49795 217 aa20.95■□□□□ 0.94
CXCL1-202ENST00000509101 HUNKP57058 714 aa20.95■□□□□ 0.94
CXCL1-202ENST00000509101 KRT24Q2M2I5 525 aa20.95■□□□□ 0.94
CXCL1-202ENST00000509101 DLK2Q6UY11 383 aa20.95■□□□□ 0.94
CXCL1-202ENST00000509101 TMC4Q7Z404 712 aa20.95■□□□□ 0.94
CXCL1-202ENST00000509101 USP48Q86UV5 1035 aa20.95■□□□□ 0.94
CXCL1-202ENST00000509101 AKAP11Q9UKA4 1901 aa20.94■□□□□ 0.94
CXCL1-202ENST00000509101 SCN9AQ15858 1988 aa20.94■□□□□ 0.94
CXCL1-202ENST00000509101 PSMD14O00487 310 aa20.94■□□□□ 0.94
CXCL1-202ENST00000509101 TMPOP42166 694 aaKnown RBP20.94■□□□□ 0.94
CXCL1-202ENST00000509101 LMOD3Q0VAK6 560 aa20.94■□□□□ 0.94
CXCL1-202ENST00000509101 SAMD7Q7Z3H4 446 aa20.94■□□□□ 0.94
CXCL1-202ENST00000509101 ZIC5Q96T25 663 aa20.94■□□□□ 0.94
CXCL1-202ENST00000509101 DBNDD1Q9H9R9 158 aa20.94■□□□□ 0.94
CXCL1-202ENST00000509101 NOGQ13253 232 aa20.93■□□□□ 0.94
CXCL1-202ENST00000509101 DGKZQ13574 1117 aa20.93■□□□□ 0.94
CXCL1-202ENST00000509101 WASHC4Q2M389 1173 aa20.93■□□□□ 0.94
CXCL1-202ENST00000509101 TBC1D10BQ4KMP7 808 aaPredicted RBP20.93■□□□□ 0.94
CXCL1-202ENST00000509101 CHPF2Q9P2E5 772 aa20.93■□□□□ 0.94
CXCL1-202ENST00000509101 RIMBP2O15034 1052 aa20.92■□□□□ 0.94
CXCL1-202ENST00000509101 CELF1Q92879 486 aaKnown RBP20.92■□□□□ 0.94
CXCL1-202ENST00000509101 TNRC18O15417 2968 aaPredicted RBP20.92■□□□□ 0.94
CXCL1-202ENST00000509101 EGFRP00533 1210 aa20.91■□□□□ 0.94
CXCL1-202ENST00000509101 PSME4Q14997 1843 aa20.91■□□□□ 0.94
CXCL1-202ENST00000509101 KRT26Q7Z3Y9 468 aa20.91■□□□□ 0.94
CXCL1-202ENST00000509101 DPF2Q92785 391 aa20.91■□□□□ 0.94
CXCL1-202ENST00000509101 NSFL1CQ9UNZ2 370 aaKnown RBP20.91■□□□□ 0.94
CXCL1-202ENST00000509101 ADM5C9JUS6 153 aa20.9■□□□□ 0.94
CXCL1-202ENST00000509101 C6orf229H3BNL8 230 aa20.9■□□□□ 0.94
CXCL1-202ENST00000509101 NEUROD2Q15784 382 aa20.9■□□□□ 0.94
CXCL1-202ENST00000509101 FAM89AQ96GI7 184 aa20.9■□□□□ 0.94
CXCL1-202ENST00000509101 LAS1LQ9Y4W2 734 aaKnown RBP20.9■□□□□ 0.94
CXCL1-202ENST00000509101 RTL9Q8NET4 1388 aa20.89■□□□□ 0.93
CXCL1-202ENST00000509101 ECE2O60344 883 aa20.89■□□□□ 0.93
CXCL1-202ENST00000509101 GPSM2P81274 684 aa20.89■□□□□ 0.93
CXCL1-202ENST00000509101 HDGFL1Q5TGJ6 251 aa20.89■□□□□ 0.93
CXCL1-202ENST00000509101 PLBD2Q8NHP8 589 aa20.89■□□□□ 0.93
CXCL1-202ENST00000509101 GBA2Q9HCG7 927 aaPredicted RBP20.89■□□□□ 0.93
CXCL1-202ENST00000509101 ATP5J2-PTCD1G3V325 749 aa20.88■□□□□ 0.93
CXCL1-202ENST00000509101 DOK7Q18PE1 504 aa20.88■□□□□ 0.93
CXCL1-202ENST00000509101 RTL5Q5HYW3 569 aaPredicted RBP20.88■□□□□ 0.93
CXCL1-202ENST00000509101 RBM26Q5T8P6 1007 aaKnown RBP20.88■□□□□ 0.93
CXCL1-202ENST00000509101 RGMBQ6NW40 437 aa20.88■□□□□ 0.93
CXCL1-202ENST00000509101 CCDC146Q8IYE0 955 aa20.88■□□□□ 0.93
CXCL1-202ENST00000509101 ISCA1Q9BUE6 129 aa20.88■□□□□ 0.93
CXCL1-202ENST00000509101 KCNQ5Q9NR82 932 aa20.88■□□□□ 0.93
CXCL1-202ENST00000509101 POLLQ9UGP5 575 aa20.88■□□□□ 0.93
CXCL1-202ENST00000509101 FAM155AB1AL88 458 aaPredicted RBP20.87■□□□□ 0.93
CXCL1-202ENST00000509101 CHL1O00533 1208 aa20.87■□□□□ 0.93
CXCL1-202ENST00000509101 RPS12P25398 132 aaKnown RBP20.87■□□□□ 0.93
CXCL1-202ENST00000509101 SF3B3Q15393 1217 aaKnown RBP20.87■□□□□ 0.93
CXCL1-202ENST00000509101 DCPSQ96C86 337 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms