RNA–Protein interactions for RNA: ENST00000508918.5

LDB2-211, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 1,498 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-211ENST00000508918 BCL2L12Q9HB09 334 aa16.65■□□□□ 0.26
LDB2-211ENST00000508918 SRP68Q9UHB9 627 aaKnown RBP16.65■□□□□ 0.26
LDB2-211ENST00000508918 ZPR1O75312 459 aa16.64■□□□□ 0.25
LDB2-211ENST00000508918 CIAO1O76071 339 aa16.64■□□□□ 0.25
LDB2-211ENST00000508918 IL15P40933 162 aaPredicted RBP16.64■□□□□ 0.25
LDB2-211ENST00000508918 IFIT5Q13325 482 aaKnown RBP16.64■□□□□ 0.25
LDB2-211ENST00000508918 LRRC24Q50LG9 513 aa16.64■□□□□ 0.25
LDB2-211ENST00000508918 ARHGEF1Q92888 912 aaKnown RBP16.64■□□□□ 0.25
LDB2-211ENST00000508918 TBC1D32Q96NH3 1257 aa16.64■□□□□ 0.25
LDB2-211ENST00000508918 CCDC8Q9H0W5 538 aaPredicted RBP16.64■□□□□ 0.25
LDB2-211ENST00000508918 ECHDC1Q9NTX5 307 aa16.64■□□□□ 0.25
LDB2-211ENST00000508918 TRIM6-TRIM34B2RNG4 842 aa16.63■□□□□ 0.25
LDB2-211ENST00000508918 ERC2O15083 957 aa16.63■□□□□ 0.25
LDB2-211ENST00000508918 HCLS1P14317 486 aaPredicted RBP16.63■□□□□ 0.25
LDB2-211ENST00000508918 TNNI3KQ59H18 835 aa16.63■□□□□ 0.25
LDB2-211ENST00000508918 TAF7LQ5H9L4 462 aa16.63■□□□□ 0.25
LDB2-211ENST00000508918 POTEAQ6S8J7 498 aa16.63■□□□□ 0.25
LDB2-211ENST00000508918 CASC1Q6TDU7 716 aa16.63■□□□□ 0.25
LDB2-211ENST00000508918 RILPL2Q969X0 211 aa16.63■□□□□ 0.25
LDB2-211ENST00000508918 PUS3Q9BZE2 481 aaKnown RBP16.63■□□□□ 0.25
LDB2-211ENST00000508918 GREM2Q9H772 168 aa16.63■□□□□ 0.25
LDB2-211ENST00000508918 TLR7Q9NYK1 1049 aaKnown RBP16.63■□□□□ 0.25
LDB2-211ENST00000508918 FPGT-TNNI3KV9GXZ4 949 aa16.63■□□□□ 0.25
LDB2-211ENST00000508918 COL24A1Q17RW2 1714 aa16.62■□□□□ 0.25
LDB2-211ENST00000508918 GLRX3O76003 335 aaKnown RBP16.62■□□□□ 0.25
LDB2-211ENST00000508918 PHF14O94880 888 aa16.62■□□□□ 0.25
LDB2-211ENST00000508918 ITGA6P23229 1130 aa16.62■□□□□ 0.25
LDB2-211ENST00000508918 TRAPPC3LQ5T215 181 aa16.62■□□□□ 0.25
LDB2-211ENST00000508918 TBC1D9BQ66K14 1250 aa16.62■□□□□ 0.25
LDB2-211ENST00000508918 IPO9Q96P70 1041 aaKnown RBP16.62■□□□□ 0.25
LDB2-211ENST00000508918 FBXO3Q9UK99 471 aa16.62■□□□□ 0.25
LDB2-211ENST00000508918 ANKRD18BA2A2Z9 1011 aa16.61■□□□□ 0.25
LDB2-211ENST00000508918 HSP90B1P14625 803 aaKnown RBP16.61■□□□□ 0.25
LDB2-211ENST00000508918 RFC4P35249 363 aa16.61■□□□□ 0.25
LDB2-211ENST00000508918 BICDL1Q6ZP65 573 aa16.61■□□□□ 0.25
LDB2-211ENST00000508918 C22orf23Q9BZE7 217 aa16.61■□□□□ 0.25
LDB2-211ENST00000508918 CASZ1Q86V15 1759 aa16.61■□□□□ 0.25
LDB2-211ENST00000508918 EIF5BO60841 1220 aaKnown RBP16.61■□□□□ 0.25
LDB2-211ENST00000508918 MAP4K4O95819 1239 aaPredicted RBP16.61■□□□□ 0.25
LDB2-211ENST00000508918 TXNRD1Q16881 649 aa16.61■□□□□ 0.25
LDB2-211ENST00000508918 GPR108Q9NPR9 543 aa16.61■□□□□ 0.25
LDB2-211ENST00000508918 TNS1Q9HBL0 1735 aaKnown RBP16.6■□□□□ 0.25
LDB2-211ENST00000508918 ADRA2BP18089 450 aa16.6■□□□□ 0.25
LDB2-211ENST00000508918 PROM2Q8N271 834 aa16.6■□□□□ 0.25
LDB2-211ENST00000508918 DDRGK1Q96HY6 314 aa16.6■□□□□ 0.25
LDB2-211ENST00000508918 DBNLQ9UJU6 430 aaKnown RBP16.6■□□□□ 0.25
LDB2-211ENST00000508918 ZNF609O15014 1411 aa16.59■□□□□ 0.25
LDB2-211ENST00000508918 LRP5O75197 1615 aa16.59■□□□□ 0.25
LDB2-211ENST00000508918 APBA3O96018 575 aa16.59■□□□□ 0.25
LDB2-211ENST00000508918 ERFEQ4G0M1 354 aa16.59■□□□□ 0.25
LDB2-211ENST00000508918 CNTROBQ8N137 903 aa16.59■□□□□ 0.25
LDB2-211ENST00000508918 SETDB2Q96T68 719 aa16.59■□□□□ 0.25
LDB2-211ENST00000508918 CEP126Q9P2H0 1117 aa16.59■□□□□ 0.25
LDB2-211ENST00000508918 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.58■□□□□ 0.24
LDB2-211ENST00000508918 PLSCR1O15162 318 aa16.58■□□□□ 0.24
LDB2-211ENST00000508918 CHMLP26374 656 aa16.58■□□□□ 0.24
LDB2-211ENST00000508918 DBNDD2Q9BQY9 259 aa16.58■□□□□ 0.24
LDB2-211ENST00000508918 RIC1Q4ADV7 1423 aa16.57■□□□□ 0.24
LDB2-211ENST00000508918 SPEF2Q9C093 1822 aa16.57■□□□□ 0.24
LDB2-211ENST00000508918 HMGB2P26583 209 aaKnown RBP16.57■□□□□ 0.24
LDB2-211ENST00000508918 CCDC152Q4G0S7 254 aa16.57■□□□□ 0.24
LDB2-211ENST00000508918 LDHAL6AQ6ZMR3 332 aa16.57■□□□□ 0.24
LDB2-211ENST00000508918 NEUROD6Q96NK8 337 aa16.57■□□□□ 0.24
LDB2-211ENST00000508918 NYXQ9GZU5 481 aa16.57■□□□□ 0.24
LDB2-211ENST00000508918 RTL9Q8NET4 1388 aa16.57■□□□□ 0.24
LDB2-211ENST00000508918 SSFA2P28290 1259 aa16.56■□□□□ 0.24
LDB2-211ENST00000508918 GTF2E1P29083 439 aaPredicted RBP16.56■□□□□ 0.24
LDB2-211ENST00000508918 TIMM10P62072 90 aa16.56■□□□□ 0.24
LDB2-211ENST00000508918 CNNM1Q9NRU3 951 aa16.56■□□□□ 0.24
LDB2-211ENST00000508918 RIPOR2Q9Y4F9 1068 aa16.56■□□□□ 0.24
LDB2-211ENST00000508918 EP400Q96L91 3159 aa16.55■□□□□ 0.24
LDB2-211ENST00000508918 ATP5JP18859 108 aa16.55■□□□□ 0.24
LDB2-211ENST00000508918 RBM25P49756 843 aaKnown RBP16.55■□□□□ 0.24
LDB2-211ENST00000508918 SLC10A5Q5PT55 438 aa16.55■□□□□ 0.24
LDB2-211ENST00000508918 NBPF5PQ86XG9 351 aaPredicted RBP16.55■□□□□ 0.24
LDB2-211ENST00000508918 ESYT1Q9BSJ8 1104 aa16.55■□□□□ 0.24
LDB2-211ENST00000508918 BOLA2Q9H3K6 86 aa16.55■□□□□ 0.24
LDB2-211ENST00000508918 SEC31BQ9NQW1 1179 aa16.55■□□□□ 0.24
LDB2-211ENST00000508918 AKAP2Q9Y2D5 859 aa16.55■□□□□ 0.24
LDB2-211ENST00000508918 ABCC12Q96J65 1359 aa16.55■□□□□ 0.24
LDB2-211ENST00000508918 RGPD3A6NKT7 1758 aaPredicted RBP16.55■□□□□ 0.24
LDB2-211ENST00000508918 RGPD4Q7Z3J3 1758 aa16.55■□□□□ 0.24
LDB2-211ENST00000508918 A0A1B0GUL7 405 aa16.54■□□□□ 0.24
LDB2-211ENST00000508918 MSH5O43196 834 aa16.54■□□□□ 0.24
LDB2-211ENST00000508918 METTL24Q5JXM2 366 aa16.54■□□□□ 0.24
LDB2-211ENST00000508918 EVI5LQ96CN4 794 aa16.54■□□□□ 0.24
LDB2-211ENST00000508918 REC8O95072 547 aa16.54■□□□□ 0.24
LDB2-211ENST00000508918 TPTE2Q6XPS3 522 aa16.54■□□□□ 0.24
LDB2-211ENST00000508918 C3orf67Q6ZVT6 689 aa16.54■□□□□ 0.24
LDB2-211ENST00000508918 CARMIL3Q8ND23 1372 aa16.54■□□□□ 0.24
LDB2-211ENST00000508918 NFIXQ14938 502 aa16.53■□□□□ 0.24
LDB2-211ENST00000508918 SF3B3Q15393 1217 aaKnown RBP16.53■□□□□ 0.24
LDB2-211ENST00000508918 USP26Q9BXU7 913 aa16.53■□□□□ 0.24
LDB2-211ENST00000508918 GYS1P13807 737 aa16.52■□□□□ 0.23
LDB2-211ENST00000508918 ATP2B3Q16720 1220 aa16.52■□□□□ 0.23
LDB2-211ENST00000508918 VGLL2Q8N8G2 317 aa16.52■□□□□ 0.23
LDB2-211ENST00000508918 MPHOSPH8Q99549 860 aa16.52■□□□□ 0.23
LDB2-211ENST00000508918 COL4A1P02462 1669 aa16.52■□□□□ 0.23
LDB2-211ENST00000508918 TAF1P21675 1872 aa16.51■□□□□ 0.23
LDB2-211ENST00000508918 MROH5Q6ZUA9 1318 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms