RNA–Protein interactions for RNA: ENST00000508910.5

POLR2J3-214, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-214ENST00000508910 MMP10P09238 476 aa13.52□□□□□ -0.25
POLR2J3-214ENST00000508910 FAM161AQ3B820 660 aa13.52□□□□□ -0.25
POLR2J3-214ENST00000508910 CCDC152Q4G0S7 254 aa13.52□□□□□ -0.25
POLR2J3-214ENST00000508910 HSP90AB4PQ58FF6 505 aa13.52□□□□□ -0.25
POLR2J3-214ENST00000508910 MSL1Q68DK7 614 aa13.52□□□□□ -0.25
POLR2J3-214ENST00000508910 PRR5LQ6MZQ0 368 aa13.52□□□□□ -0.25
POLR2J3-214ENST00000508910 TTLL11Q8NHH1 800 aa13.52□□□□□ -0.25
POLR2J3-214ENST00000508910 LRP5O75197 1615 aa13.52□□□□□ -0.25
POLR2J3-214ENST00000508910 SURF6O75683 361 aaKnown RBP13.51□□□□□ -0.25
POLR2J3-214ENST00000508910 RFX5P48382 616 aaPredicted RBP13.51□□□□□ -0.25
POLR2J3-214ENST00000508910 IFIT5Q13325 482 aaKnown RBP13.51□□□□□ -0.25
POLR2J3-214ENST00000508910 CCDC57Q2TAC2 916 aa13.51□□□□□ -0.25
POLR2J3-214ENST00000508910 COPRSQ9NQ92 184 aa13.51□□□□□ -0.25
POLR2J3-214ENST00000508910 EXOC6BQ9Y2D4 811 aa13.51□□□□□ -0.25
POLR2J3-214ENST00000508910 NOP58Q9Y2X3 529 aaKnown RBP13.51□□□□□ -0.25
POLR2J3-214ENST00000508910 PARP3Q9Y6F1 533 aa13.51□□□□□ -0.25
POLR2J3-214ENST00000508910 RAB11FIP3O75154 756 aa13.5□□□□□ -0.25
POLR2J3-214ENST00000508910 SF3B3Q15393 1217 aaKnown RBP13.5□□□□□ -0.25
POLR2J3-214ENST00000508910 GREM2Q9H772 168 aa13.5□□□□□ -0.25
POLR2J3-214ENST00000508910 ANKRD18BA2A2Z9 1011 aa13.49□□□□□ -0.25
POLR2J3-214ENST00000508910 ITGA6P23229 1130 aa13.49□□□□□ -0.25
POLR2J3-214ENST00000508910 NUCB1Q02818 461 aa13.49□□□□□ -0.25
POLR2J3-214ENST00000508910 PTPN12Q05209 780 aaKnown RBP13.49□□□□□ -0.25
POLR2J3-214ENST00000508910 OS9Q13438 667 aaPredicted RBP13.49□□□□□ -0.25
POLR2J3-214ENST00000508910 R3HDM1Q15032 1099 aaKnown RBP13.49□□□□□ -0.25
POLR2J3-214ENST00000508910 TAF7LQ5H9L4 462 aa13.49□□□□□ -0.25
POLR2J3-214ENST00000508910 ERC1Q8IUD2 1116 aa13.49□□□□□ -0.25
POLR2J3-214ENST00000508910 NLRP3Q96P20 1036 aa13.49□□□□□ -0.25
POLR2J3-214ENST00000508910 CCDC85AQ96PX6 553 aaPredicted RBP13.49□□□□□ -0.25
POLR2J3-214ENST00000508910 PDGFDQ9GZP0 370 aaPredicted RBP13.49□□□□□ -0.25
POLR2J3-214ENST00000508910 ZBTB47Q9UFB7 747 aaPredicted RBP13.49□□□□□ -0.25
POLR2J3-214ENST00000508910 PA2G4Q9UQ80 394 aaKnown RBP13.49□□□□□ -0.25
POLR2J3-214ENST00000508910 G3BP1Q13283 466 aaKnown RBP eCLIP13.48□□□□□ -0.25
POLR2J3-214ENST00000508910 ANKRD45Q5TZF3 282 aa13.48□□□□□ -0.25
POLR2J3-214ENST00000508910 C3orf67Q6ZVT6 689 aa13.48□□□□□ -0.25
POLR2J3-214ENST00000508910 CCDC24Q8N4L8 307 aa13.48□□□□□ -0.25
POLR2J3-214ENST00000508910 KLHDC4Q8TBB5 520 aa13.48□□□□□ -0.25
POLR2J3-214ENST00000508910 LRRCC1Q9C099 1032 aa13.48□□□□□ -0.25
POLR2J3-214ENST00000508910 SIL1Q9H173 461 aa13.48□□□□□ -0.25
POLR2J3-214ENST00000508910 FBXO3Q9UK99 471 aa13.48□□□□□ -0.25
POLR2J3-214ENST00000508910 PDZRN3Q9UPQ7 1066 aa13.48□□□□□ -0.25
POLR2J3-214ENST00000508910 ANKRD31Q8N7Z5 1873 aa13.48□□□□□ -0.25
POLR2J3-214ENST00000508910 APBB1O00213 710 aa13.47□□□□□ -0.25
POLR2J3-214ENST00000508910 CIAO1O76071 339 aa13.47□□□□□ -0.25
POLR2J3-214ENST00000508910 CHD1LQ86WJ1 897 aa13.47□□□□□ -0.25
POLR2J3-214ENST00000508910 KIF1BPQ96EK5 621 aa13.47□□□□□ -0.25
POLR2J3-214ENST00000508910 CDC5LQ99459 802 aaKnown RBP13.47□□□□□ -0.25
POLR2J3-214ENST00000508910 EYA2O00167 538 aa13.46□□□□□ -0.25
POLR2J3-214ENST00000508910 RHPN1Q8TCX5 695 aa13.46□□□□□ -0.25
POLR2J3-214ENST00000508910 ZNF594Q96JF6 807 aaPredicted RBP13.46□□□□□ -0.25
POLR2J3-214ENST00000508910 BRIP1Q9BX63 1249 aa13.46□□□□□ -0.25
POLR2J3-214ENST00000508910 LNPKQ9C0E8 428 aa13.46□□□□□ -0.25
POLR2J3-214ENST00000508910 MTFR1LQ9H019 292 aa13.46□□□□□ -0.25
POLR2J3-214ENST00000508910 SPEF2Q9C093 1822 aa13.46□□□□□ -0.26
POLR2J3-214ENST00000508910 KLRG2A4D1S0 409 aaPredicted RBP13.45□□□□□ -0.26
POLR2J3-214ENST00000508910 IGHMBP2P38935 993 aaKnown RBP13.45□□□□□ -0.26
POLR2J3-214ENST00000508910 IL15P40933 162 aaPredicted RBP13.45□□□□□ -0.26
POLR2J3-214ENST00000508910 CRY2Q49AN0 593 aa13.45□□□□□ -0.26
POLR2J3-214ENST00000508910 RPGRQ92834 1020 aaKnown RBP13.45□□□□□ -0.26
POLR2J3-214ENST00000508910 C10orf71Q711Q0 1435 aa13.45□□□□□ -0.26
POLR2J3-214ENST00000508910 COL11A2P13942 1736 aaPredicted RBP13.44□□□□□ -0.26
POLR2J3-214ENST00000508910 SMARCA5O60264 1052 aaPredicted RBP13.44□□□□□ -0.26
POLR2J3-214ENST00000508910 ZBTB7AO95365 584 aa13.44□□□□□ -0.26
POLR2J3-214ENST00000508910 PDE6BP35913 854 aa13.44□□□□□ -0.26
POLR2J3-214ENST00000508910 LDHAL6AQ6ZMR3 332 aa13.44□□□□□ -0.26
POLR2J3-214ENST00000508910 DDX46Q7L014 1031 aaKnown RBP13.44□□□□□ -0.26
POLR2J3-214ENST00000508910 ATG9AQ7Z3C6 839 aa13.44□□□□□ -0.26
POLR2J3-214ENST00000508910 ANKRD18AQ8IVF6 992 aa13.44□□□□□ -0.26
POLR2J3-214ENST00000508910 SEC31BQ9NQW1 1179 aa13.44□□□□□ -0.26
POLR2J3-214ENST00000508910 COL4A1P02462 1669 aa13.44□□□□□ -0.26
POLR2J3-214ENST00000508910 PSDA5PKW4 1024 aaPredicted RBP13.43□□□□□ -0.26
POLR2J3-214ENST00000508910 SASH1O94885 1247 aa13.43□□□□□ -0.26
POLR2J3-214ENST00000508910 POLD1P28340 1107 aa13.43□□□□□ -0.26
POLR2J3-214ENST00000508910 MPHOSPH8Q99549 860 aa13.43□□□□□ -0.26
POLR2J3-214ENST00000508910 CNNM1Q9NRU3 951 aa13.43□□□□□ -0.26
POLR2J3-214ENST00000508910 ZNF609O15014 1411 aa13.42□□□□□ -0.26
POLR2J3-214ENST00000508910 KIF13BQ9NQT8 1826 aa13.42□□□□□ -0.26
POLR2J3-214ENST00000508910 PDE4AP27815 886 aa13.42□□□□□ -0.26
POLR2J3-214ENST00000508910 HOXA10P31260 410 aaPredicted RBP13.42□□□□□ -0.26
POLR2J3-214ENST00000508910 GRAPQ13588 217 aa13.42□□□□□ -0.26
POLR2J3-214ENST00000508910 LRRC24Q50LG9 513 aa13.42□□□□□ -0.26
POLR2J3-214ENST00000508910 CLASRPQ8N2M8 674 aaKnown RBP13.42□□□□□ -0.26
POLR2J3-214ENST00000508910 GRAPLQ8TC17 118 aaPredicted RBP13.42□□□□□ -0.26
POLR2J3-214ENST00000508910 RBM17Q96I25 401 aaKnown RBP13.42□□□□□ -0.26
POLR2J3-214ENST00000508910 PUS3Q9BZE2 481 aaKnown RBP13.42□□□□□ -0.26
POLR2J3-214ENST00000508910 IL1RAPL2Q9NP60 686 aa13.42□□□□□ -0.26
POLR2J3-214ENST00000508910 A0A1B0GUL6 1792 aa13.42□□□□□ -0.26
POLR2J3-214ENST00000508910 MROH5Q6ZUA9 1318 aa13.41□□□□□ -0.26
POLR2J3-214ENST00000508910 RGS3P49796 1198 aa13.41□□□□□ -0.26
POLR2J3-214ENST00000508910 TFCP2Q12800 502 aa13.41□□□□□ -0.26
POLR2J3-214ENST00000508910 METTL24Q5JXM2 366 aa13.41□□□□□ -0.26
POLR2J3-214ENST00000508910 SKAP1Q86WV1 359 aa13.41□□□□□ -0.26
POLR2J3-214ENST00000508910 CELF1Q92879 486 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-214ENST00000508910 GPR108Q9NPR9 543 aa13.41□□□□□ -0.26
POLR2J3-214ENST00000508910 BSDC1Q9NW68 430 aaPredicted RBP13.41□□□□□ -0.26
POLR2J3-214ENST00000508910 CEP126Q9P2H0 1117 aa13.41□□□□□ -0.26
POLR2J3-214ENST00000508910 RIPOR2Q9Y4F9 1068 aa13.41□□□□□ -0.26
POLR2J3-214ENST00000508910 TAF1P21675 1872 aa13.41□□□□□ -0.26
POLR2J3-214ENST00000508910 DLEC1Q9Y238 1755 aa13.4□□□□□ -0.26
POLR2J3-214ENST00000508910 SRGNP10124 158 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms