RNA–Protein interactions for RNA: ENST00000508838.5

AFP-204, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-204ENST00000508838 UBN2Q6ZU65 1347 aa7.52□□□□□ -1.21
AFP-204ENST00000508838 MYH3P11055 1940 aa7.51□□□□□ -1.21
AFP-204ENST00000508838 FZD9O00144 591 aa7.51□□□□□ -1.21
AFP-204ENST00000508838 SCNN1DP51172 638 aa7.51□□□□□ -1.21
AFP-204ENST00000508838 LBX1P52954 281 aa7.51□□□□□ -1.21
AFP-204ENST00000508838 FAM161AQ3B820 660 aa7.51□□□□□ -1.21
AFP-204ENST00000508838 GPR153Q6NV75 609 aa7.51□□□□□ -1.21
AFP-204ENST00000508838 CNBD1Q8NA66 436 aa7.51□□□□□ -1.21
AFP-204ENST00000508838 ZNF622Q969S3 477 aaKnown RBP eCLIP7.51□□□□□ -1.21
AFP-204ENST00000508838 ABHD8Q96I13 439 aa7.51□□□□□ -1.21
AFP-204ENST00000508838 PHACTR3Q96KR7 559 aa7.51□□□□□ -1.21
AFP-204ENST00000508838 POLR3GLQ9BT43 218 aa7.51□□□□□ -1.21
AFP-204ENST00000508838 RSPH6AQ9H0K4 717 aa7.51□□□□□ -1.21
AFP-204ENST00000508838 ZNF277Q9NRM2 450 aaPredicted RBP7.51□□□□□ -1.21
AFP-204ENST00000508838 OTOFQ9HC10 1997 aa7.51□□□□□ -1.21
AFP-204ENST00000508838 IBTKQ9P2D0 1353 aaPredicted RBP7.5□□□□□ -1.21
AFP-204ENST00000508838 NUBP1P53384 320 aa7.5□□□□□ -1.21
AFP-204ENST00000508838 CRY2Q49AN0 593 aa7.5□□□□□ -1.21
AFP-204ENST00000508838 MAP1SQ66K74 1059 aaPredicted RBP7.5□□□□□ -1.21
AFP-204ENST00000508838 USP16Q9Y5T5 823 aa7.5□□□□□ -1.21
AFP-204ENST00000508838 ECM29Q5VYK3 1845 aa7.5□□□□□ -1.21
AFP-204ENST00000508838 RANBP2P49792 3224 aaKnown RBP7.49□□□□□ -1.21
AFP-204ENST00000508838 ECM2O94769 699 aaPredicted RBP7.49□□□□□ -1.21
AFP-204ENST00000508838 PDE6BP35913 854 aa7.49□□□□□ -1.21
AFP-204ENST00000508838 FKBP4Q02790 459 aaKnown RBP eCLIP7.49□□□□□ -1.21
AFP-204ENST00000508838 HLFQ16534 295 aa7.49□□□□□ -1.21
AFP-204ENST00000508838 LRP10Q7Z4F1 713 aa7.49□□□□□ -1.21
AFP-204ENST00000508838 MASTLQ96GX5 879 aa7.49□□□□□ -1.21
AFP-204ENST00000508838 CLSPNQ9HAW4 1339 aa7.49□□□□□ -1.21
AFP-204ENST00000508838 TMEM88BA6NKF7 163 aa7.48□□□□□ -1.21
AFP-204ENST00000508838 TRAF5O00463 557 aa7.48□□□□□ -1.21
AFP-204ENST00000508838 EPHX2P34913 555 aa7.48□□□□□ -1.21
AFP-204ENST00000508838 CTCFP49711 727 aaPredicted RBP7.48□□□□□ -1.21
AFP-204ENST00000508838 EIF4G2P78344 907 aaKnown RBP eCLIP7.48□□□□□ -1.21
AFP-204ENST00000508838 CCDC93Q567U6 631 aa7.48□□□□□ -1.21
AFP-204ENST00000508838 CST9Q5W186 159 aa7.48□□□□□ -1.21
AFP-204ENST00000508838 TRAF7Q6Q0C0 670 aa7.48□□□□□ -1.21
AFP-204ENST00000508838 DZIP3Q86Y13 1208 aaKnown RBP7.48□□□□□ -1.21
AFP-204ENST00000508838 BOLA1Q9Y3E2 137 aa7.48□□□□□ -1.21
AFP-204ENST00000508838 A0A087WZG4 1122 aa7.47□□□□□ -1.21
AFP-204ENST00000508838 SHTN1A0MZ66 631 aa7.47□□□□□ -1.21
AFP-204ENST00000508838 DIAPH1O60610 1272 aaKnown RBP7.47□□□□□ -1.21
AFP-204ENST00000508838 IARSP41252 1262 aaKnown RBP7.47□□□□□ -1.21
AFP-204ENST00000508838 CNKSR1Q969H4 720 aa7.47□□□□□ -1.21
AFP-204ENST00000508838 ZIC5Q96T25 663 aa7.47□□□□□ -1.21
AFP-204ENST00000508838 HACL1Q9UJ83 578 aa7.47□□□□□ -1.21
AFP-204ENST00000508838 TSKSQ9UJT2 592 aa7.47□□□□□ -1.21
AFP-204ENST00000508838 ZNF330Q9Y3S2 320 aaPredicted RBP7.47□□□□□ -1.21
AFP-204ENST00000508838 CEP290O15078 2479 aa7.47□□□□□ -1.21
AFP-204ENST00000508838 WDR33Q9C0J8 1336 aaKnown RBP7.47□□□□□ -1.21
AFP-204ENST00000508838 ZSWIM8A7E2V4 1837 aa7.46□□□□□ -1.21
AFP-204ENST00000508838 IQCA1LA6NCM1 817 aa7.46□□□□□ -1.22
AFP-204ENST00000508838 GNAT3A8MTJ3 354 aa7.46□□□□□ -1.22
AFP-204ENST00000508838 STARD3NLO95772 234 aa7.46□□□□□ -1.22
AFP-204ENST00000508838 NPR1P16066 1061 aa7.46□□□□□ -1.22
AFP-204ENST00000508838 PRKAR2BP31323 418 aa7.46□□□□□ -1.22
AFP-204ENST00000508838 PBX2P40425 430 aa7.46□□□□□ -1.22
AFP-204ENST00000508838 EPS15P42566 896 aa7.46□□□□□ -1.22
AFP-204ENST00000508838 RGS19P49795 217 aa7.46□□□□□ -1.22
AFP-204ENST00000508838 DCTN1Q14203 1278 aa7.46□□□□□ -1.22
AFP-204ENST00000508838 EAPPQ56P03 285 aaPredicted RBP7.46□□□□□ -1.22
AFP-204ENST00000508838 CC2D1BQ5T0F9 858 aaKnown RBP7.46□□□□□ -1.22
AFP-204ENST00000508838 DPY19L2Q6NUT2 758 aa7.46□□□□□ -1.22
AFP-204ENST00000508838 FMNL2Q96PY5 1086 aa7.46□□□□□ -1.22
AFP-204ENST00000508838 PSMD1Q99460 953 aa7.46□□□□□ -1.22
AFP-204ENST00000508838 DDX21Q9NR30 783 aaKnown RBP eCLIP7.46□□□□□ -1.22
AFP-204ENST00000508838 PDZRN3Q9UPQ7 1066 aa7.46□□□□□ -1.22
AFP-204ENST00000508838 ARAP2Q8WZ64 1704 aa7.46□□□□□ -1.22
AFP-204ENST00000508838 LAMA3Q16787 3333 aa7.45□□□□□ -1.22
AFP-204ENST00000508838 RGL2O15211 777 aa7.45□□□□□ -1.22
AFP-204ENST00000508838 AOC2O75106 756 aa7.45□□□□□ -1.22
AFP-204ENST00000508838 NTSR2O95665 410 aa7.45□□□□□ -1.22
AFP-204ENST00000508838 ST5P78524 1137 aa7.45□□□□□ -1.22
AFP-204ENST00000508838 CYP4F22Q6NT55 531 aa7.45□□□□□ -1.22
AFP-204ENST00000508838 DLK2Q6UY11 383 aa7.45□□□□□ -1.22
AFP-204ENST00000508838 MCM10Q7L590 875 aa7.45□□□□□ -1.22
AFP-204ENST00000508838 NBPF5PQ86XG9 351 aaPredicted RBP7.45□□□□□ -1.22
AFP-204ENST00000508838 NUTM1Q86Y26 1132 aa7.45□□□□□ -1.22
AFP-204ENST00000508838 TTC5Q8N0Z6 440 aa7.45□□□□□ -1.22
AFP-204ENST00000508838 CNTROBQ8N137 903 aa7.45□□□□□ -1.22
AFP-204ENST00000508838 GPC2Q8N158 579 aa7.45□□□□□ -1.22
AFP-204ENST00000508838 FAM212AQ96EL1 285 aa7.45□□□□□ -1.22
AFP-204ENST00000508838 CAPNS2Q96L46 248 aa7.45□□□□□ -1.22
AFP-204ENST00000508838 SETDB2Q96T68 719 aa7.45□□□□□ -1.22
AFP-204ENST00000508838 PCDHB8Q9UN66 801 aa7.45□□□□□ -1.22
AFP-204ENST00000508838 KNSTRNQ9Y448 316 aa7.45□□□□□ -1.22
AFP-204ENST00000508838 ZNF316A6NFI3 1004 aaPredicted RBP7.44□□□□□ -1.22
AFP-204ENST00000508838 TEFQ10587 303 aa7.44□□□□□ -1.22
AFP-204ENST00000508838 SOGA3Q5TF21 947 aa7.44□□□□□ -1.22
AFP-204ENST00000508838 CLEC4GQ6UXB4 293 aa7.44□□□□□ -1.22
AFP-204ENST00000508838 TTLL7Q6ZT98 887 aa7.44□□□□□ -1.22
AFP-204ENST00000508838 SYNE4Q8N205 404 aa7.44□□□□□ -1.22
AFP-204ENST00000508838 GAS2L2Q8NHY3 880 aa7.44□□□□□ -1.22
AFP-204ENST00000508838 TRPM4Q8TD43 1214 aa7.44□□□□□ -1.22
AFP-204ENST00000508838 PODXL2Q9NZ53 605 aa7.44□□□□□ -1.22
AFP-204ENST00000508838 NIP7Q9Y221 180 aaKnown RBP eCLIP7.44□□□□□ -1.22
AFP-204ENST00000508838 TLL2Q9Y6L7 1015 aa7.44□□□□□ -1.22
AFP-204ENST00000508838 KIAA0100Q14667 2235 aaKnown RBP7.43□□□□□ -1.22
AFP-204ENST00000508838 BTBD11A6QL63 1104 aa7.43□□□□□ -1.22
AFP-204ENST00000508838 EGFRP00533 1210 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms