RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 KIAA1551Q9HCM1 1747 aa11.86□□□□□ -0.51
COL4A3BP-206ENST00000508809 HSP90AB1P08238 724 aaKnown RBP11.85□□□□□ -0.51
COL4A3BP-206ENST00000508809 ZNF526Q8TF50 670 aaPredicted RBP11.85□□□□□ -0.51
COL4A3BP-206ENST00000508809 DCAF5Q96JK2 942 aa11.85□□□□□ -0.51
COL4A3BP-206ENST00000508809 BEGAINQ9BUH8 593 aa11.85□□□□□ -0.51
COL4A3BP-206ENST00000508809 WWC3Q9ULE0 1092 aa11.85□□□□□ -0.51
COL4A3BP-206ENST00000508809 SALL2Q9Y467 1007 aaPredicted RBP11.85□□□□□ -0.51
COL4A3BP-206ENST00000508809 N4BP2Q86UW6 1770 aaPredicted RBP11.84□□□□□ -0.51
COL4A3BP-206ENST00000508809 PXDNLA1KZ92 1463 aa11.84□□□□□ -0.51
COL4A3BP-206ENST00000508809 HOXA2O43364 376 aa11.84□□□□□ -0.51
COL4A3BP-206ENST00000508809 RPS6KA4O75676 772 aa11.84□□□□□ -0.51
COL4A3BP-206ENST00000508809 CNTNAP4Q9C0A0 1308 aa11.84□□□□□ -0.51
COL4A3BP-206ENST00000508809 PCNTO95613 3336 aa11.83□□□□□ -0.52
COL4A3BP-206ENST00000508809 COL5A3P25940 1745 aaPredicted RBP11.83□□□□□ -0.52
COL4A3BP-206ENST00000508809 BRCA1P38398 1863 aaKnown RBP11.83□□□□□ -0.52
COL4A3BP-206ENST00000508809 A0A0G2JLW4 131 aa11.83□□□□□ -0.52
COL4A3BP-206ENST00000508809 GYS1P13807 737 aa11.83□□□□□ -0.52
COL4A3BP-206ENST00000508809 PLEKHO1Q53GL0 409 aaPredicted RBP11.83□□□□□ -0.52
COL4A3BP-206ENST00000508809 SLC6A16Q9GZN6 736 aa11.83□□□□□ -0.52
COL4A3BP-206ENST00000508809 KCNA3P22001 575 aa11.82□□□□□ -0.52
COL4A3BP-206ENST00000508809 TRIM26Q12899 539 aaPredicted RBP11.82□□□□□ -0.52
COL4A3BP-206ENST00000508809 AMOTQ4VCS5 1084 aa11.82□□□□□ -0.52
COL4A3BP-206ENST00000508809 CCDC87Q9NVE4 849 aa11.82□□□□□ -0.52
COL4A3BP-206ENST00000508809 C10orf71Q711Q0 1435 aa11.82□□□□□ -0.52
COL4A3BP-206ENST00000508809 TOMM70O94826 608 aa11.81□□□□□ -0.52
COL4A3BP-206ENST00000508809 DPEP1P16444 411 aa11.81□□□□□ -0.52
COL4A3BP-206ENST00000508809 RFC4P35249 363 aa11.81□□□□□ -0.52
COL4A3BP-206ENST00000508809 TNNT2P45379 298 aaPredicted RBP11.81□□□□□ -0.52
COL4A3BP-206ENST00000508809 BCS1LQ9Y276 419 aa11.81□□□□□ -0.52
COL4A3BP-206ENST00000508809 C4AP0C0L4 1744 aa11.8□□□□□ -0.52
COL4A3BP-206ENST00000508809 KDM6AO15550 1401 aaPredicted RBP11.8□□□□□ -0.52
COL4A3BP-206ENST00000508809 CABP4P57796 275 aa11.8□□□□□ -0.52
COL4A3BP-206ENST00000508809 DNAJC5GQ8N7S2 189 aa11.8□□□□□ -0.52
COL4A3BP-206ENST00000508809 PARP3Q9Y6F1 533 aa11.8□□□□□ -0.52
COL4A3BP-206ENST00000508809 ARFGEF1Q9Y6D6 1849 aa11.8□□□□□ -0.52
COL4A3BP-206ENST00000508809 S1PR4O95977 384 aa11.79□□□□□ -0.52
COL4A3BP-206ENST00000508809 MTHFSP49914 203 aa11.79□□□□□ -0.52
COL4A3BP-206ENST00000508809 ZNF530Q6P9A1 599 aaPredicted RBP11.79□□□□□ -0.52
COL4A3BP-206ENST00000508809 ARHGAP27Q6ZUM4 889 aa11.79□□□□□ -0.52
COL4A3BP-206ENST00000508809 SPIRE2Q8WWL2 714 aa11.79□□□□□ -0.52
COL4A3BP-206ENST00000508809 PANK3Q9H999 370 aa11.79□□□□□ -0.52
COL4A3BP-206ENST00000508809 CLSPNQ9HAW4 1339 aa11.79□□□□□ -0.52
COL4A3BP-206ENST00000508809 MS4A1P11836 297 aa11.78□□□□□ -0.52
COL4A3BP-206ENST00000508809 TPRNQ4KMQ1 711 aa11.78□□□□□ -0.52
COL4A3BP-206ENST00000508809 BRICD5Q6PL45 260 aa11.78□□□□□ -0.52
COL4A3BP-206ENST00000508809 NFATC2IPQ8NCF5 419 aa11.78□□□□□ -0.52
COL4A3BP-206ENST00000508809 SBF1O95248 1867 aa11.77□□□□□ -0.53
COL4A3BP-206ENST00000508809 PTCD1O75127 700 aaKnown RBP11.77□□□□□ -0.53
COL4A3BP-206ENST00000508809 FDX1P10109 184 aa11.77□□□□□ -0.53
COL4A3BP-206ENST00000508809 TM4SF1P30408 202 aa11.77□□□□□ -0.53
COL4A3BP-206ENST00000508809 CRKLP46109 303 aaKnown RBP11.77□□□□□ -0.53
COL4A3BP-206ENST00000508809 AEBP1Q8IUX7 1158 aa11.77□□□□□ -0.53
COL4A3BP-206ENST00000508809 THAP11Q96EK4 314 aa11.77□□□□□ -0.53
COL4A3BP-206ENST00000508809 PIM2Q9P1W9 311 aa11.77□□□□□ -0.53
COL4A3BP-206ENST00000508809 C1orf141Q5JVX7 400 aa11.76□□□□□ -0.53
COL4A3BP-206ENST00000508809 C9orf131Q5VYM1 1079 aa11.76□□□□□ -0.53
COL4A3BP-206ENST00000508809 INTS5Q6P9B9 1019 aaKnown RBP11.76□□□□□ -0.53
COL4A3BP-206ENST00000508809 ANKLE1Q8NAG6 615 aa11.76□□□□□ -0.53
COL4A3BP-206ENST00000508809 POLR3GLQ9BT43 218 aa11.76□□□□□ -0.53
COL4A3BP-206ENST00000508809 TBC1D2Q9BYX2 928 aa11.76□□□□□ -0.53
COL4A3BP-206ENST00000508809 NMRK2Q9NPI5 230 aa11.76□□□□□ -0.53
COL4A3BP-206ENST00000508809 SRP68Q9UHB9 627 aaKnown RBP11.76□□□□□ -0.53
COL4A3BP-206ENST00000508809 USP42Q9H9J4 1324 aaKnown RBP11.76□□□□□ -0.53
COL4A3BP-206ENST00000508809 SCN11AQ9UI33 1791 aa11.76□□□□□ -0.53
COL4A3BP-206ENST00000508809 RNF223E7ERA6 249 aa11.75□□□□□ -0.53
COL4A3BP-206ENST00000508809 IL13P35225 146 aa11.75□□□□□ -0.53
COL4A3BP-206ENST00000508809 EIF4G2P78344 907 aaKnown RBP eCLIP11.75□□□□□ -0.53
COL4A3BP-206ENST00000508809 DDR1Q08345 913 aa11.75□□□□□ -0.53
COL4A3BP-206ENST00000508809 MSS51Q4VC12 460 aa11.75□□□□□ -0.53
COL4A3BP-206ENST00000508809 DALRD3Q5D0E6 543 aaKnown RBP11.75□□□□□ -0.53
COL4A3BP-206ENST00000508809 SULT6B1Q6IMI4 303 aa11.75□□□□□ -0.53
COL4A3BP-206ENST00000508809 RNF19BQ6ZMZ0 732 aa11.75□□□□□ -0.53
COL4A3BP-206ENST00000508809 MORC1Q86VD1 984 aa11.75□□□□□ -0.53
COL4A3BP-206ENST00000508809 USB1Q9BQ65 265 aaKnown RBP11.75□□□□□ -0.53
COL4A3BP-206ENST00000508809 ADAMTS7Q9UKP4 1686 aa11.75□□□□□ -0.53
COL4A3BP-206ENST00000508809 POLRMTO00411 1230 aaKnown RBP11.74□□□□□ -0.53
COL4A3BP-206ENST00000508809 HSPA5P11021 654 aaKnown RBP11.74□□□□□ -0.53
COL4A3BP-206ENST00000508809 PRKD2Q9BZL6 878 aa11.74□□□□□ -0.53
COL4A3BP-206ENST00000508809 TJP1Q07157 1748 aa11.74□□□□□ -0.53
COL4A3BP-206ENST00000508809 AKAP4Q5JQC9 854 aa11.73□□□□□ -0.53
COL4A3BP-206ENST00000508809 HLA-CQ95604 372 aa11.73□□□□□ -0.53
COL4A3BP-206ENST00000508809 V9GY48 417 aaPredicted RBP11.73□□□□□ -0.53
COL4A3BP-206ENST00000508809 C6orf229H3BNL8 230 aa11.72□□□□□ -0.53
COL4A3BP-206ENST00000508809 GJA5P36382 358 aa11.72□□□□□ -0.53
COL4A3BP-206ENST00000508809 GUCA2AQ02747 115 aa11.72□□□□□ -0.53
COL4A3BP-206ENST00000508809 FSTL1Q12841 308 aa11.72□□□□□ -0.53
COL4A3BP-206ENST00000508809 RSPH6AQ9H0K4 717 aa11.72□□□□□ -0.53
COL4A3BP-206ENST00000508809 SLC52A2Q9HAB3 445 aa11.72□□□□□ -0.53
COL4A3BP-206ENST00000508809 LGR6Q9HBX8 967 aa11.72□□□□□ -0.53
COL4A3BP-206ENST00000508809 SOS1Q07889 1333 aaPredicted RBP11.71□□□□□ -0.53
COL4A3BP-206ENST00000508809 KDM2BQ8NHM5 1336 aa11.71□□□□□ -0.53
COL4A3BP-206ENST00000508809 MOXD2PA6NHM9 499 aa11.71□□□□□ -0.53
COL4A3BP-206ENST00000508809 CYP19A1P11511 503 aaPredicted RBP11.71□□□□□ -0.53
COL4A3BP-206ENST00000508809 CHRNA5P30532 468 aa11.71□□□□□ -0.53
COL4A3BP-206ENST00000508809 USPL1Q5W0Q7 1092 aa11.71□□□□□ -0.53
COL4A3BP-206ENST00000508809 RETREG3Q86VR2 466 aa11.71□□□□□ -0.53
COL4A3BP-206ENST00000508809 DNAJC10Q8IXB1 793 aa11.71□□□□□ -0.53
COL4A3BP-206ENST00000508809 DDRGK1Q96HY6 314 aa11.71□□□□□ -0.53
COL4A3BP-206ENST00000508809 KDM4CQ9H3R0 1056 aa11.71□□□□□ -0.53
COL4A3BP-206ENST00000508809 AFDNP55196 1824 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms