RNA–Protein interactions for RNA: ENST00000508717.1

TRIO-212, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 859 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-212ENST00000508717 KIAA1551Q9HCM1 1747 aa16.52■□□□□ 0.24
TRIO-212ENST00000508717 TNRC6CQ9HCJ0 1690 aaKnown RBP16.51■□□□□ 0.23
TRIO-212ENST00000508717 NPR1P16066 1061 aa16.51■□□□□ 0.23
TRIO-212ENST00000508717 CCDC152Q4G0S7 254 aa16.51■□□□□ 0.23
TRIO-212ENST00000508717 STYK1Q6J9G0 422 aa16.51■□□□□ 0.23
TRIO-212ENST00000508717 ANKRD44Q8N8A2 993 aa16.51■□□□□ 0.23
TRIO-212ENST00000508717 MASTLQ96GX5 879 aa16.51■□□□□ 0.23
TRIO-212ENST00000508717 CRAMP1Q96RY5 1269 aa16.51■□□□□ 0.23
TRIO-212ENST00000508717 SYT17Q9BSW7 474 aa16.51■□□□□ 0.23
TRIO-212ENST00000508717 BICC1Q9H694 974 aaKnown RBP16.51■□□□□ 0.23
TRIO-212ENST00000508717 PPP1R1BQ9UD71 204 aaPredicted RBP16.51■□□□□ 0.23
TRIO-212ENST00000508717 MYH3P11055 1940 aa16.51■□□□□ 0.23
TRIO-212ENST00000508717 LRRFIP2Q9Y608 721 aaKnown RBP16.5■□□□□ 0.23
TRIO-212ENST00000508717 DPEP1P16444 411 aa16.49■□□□□ 0.23
TRIO-212ENST00000508717 ALDH1B1P30837 517 aa16.49■□□□□ 0.23
TRIO-212ENST00000508717 LMBR1LQ6UX01 489 aa16.49■□□□□ 0.23
TRIO-212ENST00000508717 C2CD5Q86YS7 1000 aa16.49■□□□□ 0.23
TRIO-212ENST00000508717 CRBNQ96SW2 442 aa16.49■□□□□ 0.23
TRIO-212ENST00000508717 RPGRQ92834 1020 aaKnown RBP16.48■□□□□ 0.23
TRIO-212ENST00000508717 CNKSR1Q969H4 720 aa16.48■□□□□ 0.23
TRIO-212ENST00000508717 RBM17Q96I25 401 aaKnown RBP16.48■□□□□ 0.23
TRIO-212ENST00000508717 DLEC1Q9Y238 1755 aa16.48■□□□□ 0.23
TRIO-212ENST00000508717 CHRNA5P30532 468 aa16.47■□□□□ 0.23
TRIO-212ENST00000508717 DDX46Q7L014 1031 aaKnown RBP16.47■□□□□ 0.23
TRIO-212ENST00000508717 RPAP2Q8IXW5 612 aaPredicted RBP16.47■□□□□ 0.23
TRIO-212ENST00000508717 GREM2Q9H772 168 aa16.47■□□□□ 0.23
TRIO-212ENST00000508717 COL11A2P13942 1736 aaPredicted RBP16.47■□□□□ 0.23
TRIO-212ENST00000508717 A0A0G2JLW4 131 aa16.46■□□□□ 0.23
TRIO-212ENST00000508717 BBOX1O75936 387 aa16.46■□□□□ 0.23
TRIO-212ENST00000508717 ATP8B2P98198 1209 aa16.46■□□□□ 0.23
TRIO-212ENST00000508717 GRAPQ13588 217 aa16.46■□□□□ 0.23
TRIO-212ENST00000508717 TMC4Q7Z404 712 aa16.46■□□□□ 0.23
TRIO-212ENST00000508717 NLGN2Q8NFZ4 835 aa16.46■□□□□ 0.23
TRIO-212ENST00000508717 GRAPLQ8TC17 118 aaPredicted RBP16.46■□□□□ 0.23
TRIO-212ENST00000508717 PIM2Q9P1W9 311 aa16.46■□□□□ 0.23
TRIO-212ENST00000508717 ITGA6P23229 1130 aa16.45■□□□□ 0.22
TRIO-212ENST00000508717 RFX5P48382 616 aaPredicted RBP16.45■□□□□ 0.22
TRIO-212ENST00000508717 IFIT5Q13325 482 aaKnown RBP16.45■□□□□ 0.22
TRIO-212ENST00000508717 POLA2Q14181 598 aa16.45■□□□□ 0.22
TRIO-212ENST00000508717 FAM161AQ3B820 660 aa16.45■□□□□ 0.22
TRIO-212ENST00000508717 CEP85Q6P2H3 762 aa16.45■□□□□ 0.22
TRIO-212ENST00000508717 SSH3Q8TE77 659 aa16.45■□□□□ 0.22
TRIO-212ENST00000508717 CDC5LQ99459 802 aaKnown RBP16.45■□□□□ 0.22
TRIO-212ENST00000508717 FBXO3Q9UK99 471 aa16.45■□□□□ 0.22
TRIO-212ENST00000508717 BRCA1P38398 1863 aaKnown RBP16.45■□□□□ 0.22
TRIO-212ENST00000508717 ANKRD18BA2A2Z9 1011 aa16.44■□□□□ 0.22
TRIO-212ENST00000508717 RPS8P62241 208 aaKnown RBP16.44■□□□□ 0.22
TRIO-212ENST00000508717 CCDC57Q2TAC2 916 aa16.44■□□□□ 0.22
TRIO-212ENST00000508717 TTLL6Q8N841 843 aa16.44■□□□□ 0.22
TRIO-212ENST00000508717 C7orf43Q8WVR3 580 aa16.44■□□□□ 0.22
TRIO-212ENST00000508717 SEC31BQ9NQW1 1179 aa16.44■□□□□ 0.22
TRIO-212ENST00000508717 EXOC6Q8TAG9 804 aa16.43■□□□□ 0.22
TRIO-212ENST00000508717 CELF1Q92879 486 aaKnown RBP16.43■□□□□ 0.22
TRIO-212ENST00000508717 COPRSQ9NQ92 184 aa16.43■□□□□ 0.22
TRIO-212ENST00000508717 BSDC1Q9NW68 430 aaPredicted RBP16.43■□□□□ 0.22
TRIO-212ENST00000508717 SRGAP3O43295 1099 aa16.42■□□□□ 0.22
TRIO-212ENST00000508717 PTPN12Q05209 780 aaKnown RBP16.42■□□□□ 0.22
TRIO-212ENST00000508717 GRIPAP1Q4V328 841 aa16.42■□□□□ 0.22
TRIO-212ENST00000508717 CC2D2BQ6DHV5 1058 aa16.42■□□□□ 0.22
TRIO-212ENST00000508717 PRPF40BQ6NWY9 871 aaKnown RBP16.42■□□□□ 0.22
TRIO-212ENST00000508717 SIRT2Q8IXJ6 389 aa16.42■□□□□ 0.22
TRIO-212ENST00000508717 KLHL34Q8N239 644 aa16.42■□□□□ 0.22
TRIO-212ENST00000508717 ZNF622Q969S3 477 aaKnown RBP eCLIP16.42■□□□□ 0.22
TRIO-212ENST00000508717 C1orf115Q9H7X2 142 aa16.42■□□□□ 0.22
TRIO-212ENST00000508717 PNMA6EA0A0J9YXQ4 647 aa16.41■□□□□ 0.22
TRIO-212ENST00000508717 DALRD3Q5D0E6 543 aaKnown RBP16.41■□□□□ 0.22
TRIO-212ENST00000508717 ANKRD18AQ8IVF6 992 aa16.41■□□□□ 0.22
TRIO-212ENST00000508717 SP8Q8IXZ3 490 aa16.41■□□□□ 0.22
TRIO-212ENST00000508717 ATP6V0A2Q9Y487 856 aa16.41■□□□□ 0.22
TRIO-212ENST00000508717 GOLGB1Q14789 3259 aaKnown RBP16.41■□□□□ 0.22
TRIO-212ENST00000508717 IGHMBP2P38935 993 aaKnown RBP16.4■□□□□ 0.22
TRIO-212ENST00000508717 ERICH6BQ5W0A0 696 aa16.4■□□□□ 0.22
TRIO-212ENST00000508717 CCDC85AQ96PX6 553 aaPredicted RBP16.4■□□□□ 0.22
TRIO-212ENST00000508717 NOP58Q9Y2X3 529 aaKnown RBP16.4■□□□□ 0.22
TRIO-212ENST00000508717 PCDHB15Q9Y5E8 787 aa16.4■□□□□ 0.22
TRIO-212ENST00000508717 SNED1Q8TER0 1413 aa16.39■□□□□ 0.21
TRIO-212ENST00000508717 PPEF1O14829 653 aaPredicted RBP16.39■□□□□ 0.21
TRIO-212ENST00000508717 HMMRO75330 724 aa16.39■□□□□ 0.21
TRIO-212ENST00000508717 CIAO1O76071 339 aa16.39■□□□□ 0.21
TRIO-212ENST00000508717 SOGA3Q5TF21 947 aa16.39■□□□□ 0.21
TRIO-212ENST00000508717 CHMP3Q9Y3E7 222 aa16.39■□□□□ 0.21
TRIO-212ENST00000508717 RIPOR2Q9Y4F9 1068 aa16.39■□□□□ 0.21
TRIO-212ENST00000508717 SLX4Q8IY92 1834 aa16.39■□□□□ 0.21
TRIO-212ENST00000508717 COL4A1P02462 1669 aa16.39■□□□□ 0.21
TRIO-212ENST00000508717 LDHAL6AQ6ZMR3 332 aa16.38■□□□□ 0.21
TRIO-212ENST00000508717 MPHOSPH8Q99549 860 aa16.38■□□□□ 0.21
TRIO-212ENST00000508717 PODXL2Q9NZ53 605 aa16.38■□□□□ 0.21
TRIO-212ENST00000508717 LRRC37AA6NMS7 1700 aa16.38■□□□□ 0.21
TRIO-212ENST00000508717 ARFGEF1Q9Y6D6 1849 aa16.38■□□□□ 0.21
TRIO-212ENST00000508717 TAF1P21675 1872 aa16.37■□□□□ 0.21
TRIO-212ENST00000508717 EYA2O00167 538 aa16.37■□□□□ 0.21
TRIO-212ENST00000508717 IRX6P78412 446 aaPredicted RBP16.37■□□□□ 0.21
TRIO-212ENST00000508717 HDAC1Q13547 482 aaPredicted RBP16.37■□□□□ 0.21
TRIO-212ENST00000508717 TAF7LQ5H9L4 462 aa16.37■□□□□ 0.21
TRIO-212ENST00000508717 ZNF594Q96JF6 807 aaPredicted RBP16.37■□□□□ 0.21
TRIO-212ENST00000508717 MINPP1Q9UNW1 487 aa16.37■□□□□ 0.21
TRIO-212ENST00000508717 NEFLP07196 543 aa16.36■□□□□ 0.21
TRIO-212ENST00000508717 ATG9AQ7Z3C6 839 aa16.36■□□□□ 0.21
TRIO-212ENST00000508717 BCS1LQ9Y276 419 aa16.36■□□□□ 0.21
TRIO-212ENST00000508717 IL15P40933 162 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms