RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 ZBTB7BO15156 539 aaPredicted RBP13.06□□□□□ -0.32
PTPN20-220ENST00000508715 NPHP1O15259 732 aa13.06□□□□□ -0.32
PTPN20-220ENST00000508715 CSF1RP07333 972 aa13.06□□□□□ -0.32
PTPN20-220ENST00000508715 ANKRD44Q8N8A2 993 aa13.06□□□□□ -0.32
PTPN20-220ENST00000508715 NLRP3Q96P20 1036 aa13.06□□□□□ -0.32
PTPN20-220ENST00000508715 SEC31BQ9NQW1 1179 aa13.06□□□□□ -0.32
PTPN20-220ENST00000508715 C9orf78Q9NZ63 289 aaPredicted RBP13.06□□□□□ -0.32
PTPN20-220ENST00000508715 COG6Q9Y2V7 657 aa13.06□□□□□ -0.32
PTPN20-220ENST00000508715 A0A1B0GUL6 1792 aa13.06□□□□□ -0.32
PTPN20-220ENST00000508715 LRRC37AA6NMS7 1700 aa13.05□□□□□ -0.32
PTPN20-220ENST00000508715 NPR1P16066 1061 aa13.05□□□□□ -0.32
PTPN20-220ENST00000508715 YBX3P16989 372 aaKnown RBP eCLIP13.05□□□□□ -0.32
PTPN20-220ENST00000508715 CTSWP56202 376 aa13.05□□□□□ -0.32
PTPN20-220ENST00000508715 PDE3AQ14432 1141 aa13.05□□□□□ -0.32
PTPN20-220ENST00000508715 STYK1Q6J9G0 422 aa13.05□□□□□ -0.32
PTPN20-220ENST00000508715 C7orf43Q8WVR3 580 aa13.05□□□□□ -0.32
PTPN20-220ENST00000508715 MASTLQ96GX5 879 aa13.05□□□□□ -0.32
PTPN20-220ENST00000508715 CCDC85AQ96PX6 553 aaPredicted RBP13.05□□□□□ -0.32
PTPN20-220ENST00000508715 SUPT16HQ9Y5B9 1047 aaKnown RBP13.05□□□□□ -0.32
PTPN20-220ENST00000508715 SBF1O95248 1867 aa13.05□□□□□ -0.32
PTPN20-220ENST00000508715 SNED1Q8TER0 1413 aa13.05□□□□□ -0.32
PTPN20-220ENST00000508715 MVPQ14764 893 aaKnown RBP13.04□□□□□ -0.32
PTPN20-220ENST00000508715 RABL6Q3YEC7 729 aaPredicted RBP13.04□□□□□ -0.32
PTPN20-220ENST00000508715 OLFM4Q6UX06 510 aa13.04□□□□□ -0.32
PTPN20-220ENST00000508715 FTSJ3Q8IY81 847 aaKnown RBP13.04□□□□□ -0.32
PTPN20-220ENST00000508715 CELF1Q92879 486 aaKnown RBP13.04□□□□□ -0.32
PTPN20-220ENST00000508715 BICC1Q9H694 974 aaKnown RBP13.04□□□□□ -0.32
PTPN20-220ENST00000508715 GREM2Q9H772 168 aa13.04□□□□□ -0.32
PTPN20-220ENST00000508715 LTBP1Q14766 1721 aa13.04□□□□□ -0.32
PTPN20-220ENST00000508715 FAM161AQ3B820 660 aa13.03□□□□□ -0.32
PTPN20-220ENST00000508715 LMBR1LQ6UX01 489 aa13.03□□□□□ -0.32
PTPN20-220ENST00000508715 ITPRIPQ8IWB1 547 aa13.03□□□□□ -0.32
PTPN20-220ENST00000508715 ZNF622Q969S3 477 aaKnown RBP eCLIP13.03□□□□□ -0.32
PTPN20-220ENST00000508715 CRAMP1Q96RY5 1269 aa13.03□□□□□ -0.32
PTPN20-220ENST00000508715 PIM2Q9P1W9 311 aa13.03□□□□□ -0.32
PTPN20-220ENST00000508715 PDZRN3Q9UPQ7 1066 aa13.03□□□□□ -0.32
PTPN20-220ENST00000508715 LRRFIP2Q9Y608 721 aaKnown RBP13.03□□□□□ -0.32
PTPN20-220ENST00000508715 RTL9Q8NET4 1388 aa13.03□□□□□ -0.32
PTPN20-220ENST00000508715 PRPF40BQ6NWY9 871 aaKnown RBP13.02□□□□□ -0.33
PTPN20-220ENST00000508715 TTLL6Q8N841 843 aa13.02□□□□□ -0.33
PTPN20-220ENST00000508715 UBTFL1P0CB47 393 aaPredicted RBP13.01□□□□□ -0.33
PTPN20-220ENST00000508715 RFX5P48382 616 aaPredicted RBP13.01□□□□□ -0.33
PTPN20-220ENST00000508715 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.01□□□□□ -0.33
PTPN20-220ENST00000508715 RPGRQ92834 1020 aaKnown RBP13.01□□□□□ -0.33
PTPN20-220ENST00000508715 RBM17Q96I25 401 aaKnown RBP13.01□□□□□ -0.33
PTPN20-220ENST00000508715 C1orf115Q9H7X2 142 aa13.01□□□□□ -0.33
PTPN20-220ENST00000508715 ZBTB40Q9NUA8 1239 aa13.01□□□□□ -0.33
PTPN20-220ENST00000508715 MS4A1P11836 297 aa13□□□□□ -0.33
PTPN20-220ENST00000508715 ITGA6P23229 1130 aa13□□□□□ -0.33
PTPN20-220ENST00000508715 GRAPQ13588 217 aa13□□□□□ -0.33
PTPN20-220ENST00000508715 CCDC152Q4G0S7 254 aa13□□□□□ -0.33
PTPN20-220ENST00000508715 DALRD3Q5D0E6 543 aaKnown RBP13□□□□□ -0.33
PTPN20-220ENST00000508715 GRAPLQ8TC17 118 aaPredicted RBP13□□□□□ -0.33
PTPN20-220ENST00000508715 CNKSR1Q969H4 720 aa13□□□□□ -0.33
PTPN20-220ENST00000508715 ZNF594Q96JF6 807 aaPredicted RBP13□□□□□ -0.33
PTPN20-220ENST00000508715 CRBNQ96SW2 442 aa13□□□□□ -0.33
PTPN20-220ENST00000508715 BCS1LQ9Y276 419 aa13□□□□□ -0.33
PTPN20-220ENST00000508715 DUOX1Q9NRD9 1551 aa12.99□□□□□ -0.33
PTPN20-220ENST00000508715 GNAI3P08754 354 aa12.99□□□□□ -0.33
PTPN20-220ENST00000508715 PRELPP51888 382 aa12.99□□□□□ -0.33
PTPN20-220ENST00000508715 DDX46Q7L014 1031 aaKnown RBP12.99□□□□□ -0.33
PTPN20-220ENST00000508715 KLHDC4Q8TBB5 520 aa12.99□□□□□ -0.33
PTPN20-220ENST00000508715 ZNF219Q9P2Y4 722 aaPredicted RBP12.99□□□□□ -0.33
PTPN20-220ENST00000508715 CHD4Q14839 1912 aa12.99□□□□□ -0.33
PTPN20-220ENST00000508715 DICER1Q9UPY3 1922 aaKnown RBP12.99□□□□□ -0.33
PTPN20-220ENST00000508715 PNMA6EA0A0J9YXQ4 647 aa12.98□□□□□ -0.33
PTPN20-220ENST00000508715 WTIPA6NIX2 430 aaPredicted RBP12.98□□□□□ -0.33
PTPN20-220ENST00000508715 C21orf2O43822 256 aa12.98□□□□□ -0.33
PTPN20-220ENST00000508715 GNAI2P04899 355 aa12.98□□□□□ -0.33
PTPN20-220ENST00000508715 HSP90B1P14625 803 aaKnown RBP12.98□□□□□ -0.33
PTPN20-220ENST00000508715 ALDH1B1P30837 517 aa12.98□□□□□ -0.33
PTPN20-220ENST00000508715 RPS8P62241 208 aaKnown RBP12.98□□□□□ -0.33
PTPN20-220ENST00000508715 MTX1Q13505 466 aa12.98□□□□□ -0.33
PTPN20-220ENST00000508715 DDX19BQ9UMR2 479 aa12.98□□□□□ -0.33
PTPN20-220ENST00000508715 NFKBIEO00221 500 aa12.97□□□□□ -0.33
PTPN20-220ENST00000508715 PPEF1O14829 653 aaPredicted RBP12.97□□□□□ -0.33
PTPN20-220ENST00000508715 BBOX1O75936 387 aa12.97□□□□□ -0.33
PTPN20-220ENST00000508715 SIRT2Q8IXJ6 389 aa12.97□□□□□ -0.33
PTPN20-220ENST00000508715 PUS3Q9BZE2 481 aaKnown RBP12.97□□□□□ -0.33
PTPN20-220ENST00000508715 ATP6V0A2Q9Y487 856 aa12.97□□□□□ -0.33
PTPN20-220ENST00000508715 IRX6P78412 446 aaPredicted RBP12.96□□□□□ -0.33
PTPN20-220ENST00000508715 ATP8B2P98198 1209 aa12.96□□□□□ -0.33
PTPN20-220ENST00000508715 PTPN12Q05209 780 aaKnown RBP12.96□□□□□ -0.33
PTPN20-220ENST00000508715 POLA2Q14181 598 aa12.96□□□□□ -0.33
PTPN20-220ENST00000508715 SP8Q8IXZ3 490 aa12.96□□□□□ -0.33
PTPN20-220ENST00000508715 PELP1Q8IZL8 1130 aaKnown RBP12.96□□□□□ -0.33
PTPN20-220ENST00000508715 CHMP3Q9Y3E7 222 aa12.96□□□□□ -0.33
PTPN20-220ENST00000508715 COL4A5P29400 1685 aa12.96□□□□□ -0.34
PTPN20-220ENST00000508715 ANKRD18BA2A2Z9 1011 aa12.95□□□□□ -0.34
PTPN20-220ENST00000508715 IFIT5Q13325 482 aaKnown RBP12.95□□□□□ -0.34
PTPN20-220ENST00000508715 GPR162Q16538 588 aa12.95□□□□□ -0.34
PTPN20-220ENST00000508715 LRRC24Q50LG9 513 aa12.95□□□□□ -0.34
PTPN20-220ENST00000508715 CEP85Q6P2H3 762 aa12.95□□□□□ -0.34
PTPN20-220ENST00000508715 EXOC6Q8TAG9 804 aa12.95□□□□□ -0.34
PTPN20-220ENST00000508715 BSDC1Q9NW68 430 aaPredicted RBP12.95□□□□□ -0.34
PTPN20-220ENST00000508715 PA2G4Q9UQ80 394 aaKnown RBP12.95□□□□□ -0.34
PTPN20-220ENST00000508715 GPSM2P81274 684 aa12.94□□□□□ -0.34
PTPN20-220ENST00000508715 RASSF7Q02833 373 aa12.94□□□□□ -0.34
PTPN20-220ENST00000508715 CCDC57Q2TAC2 916 aa12.94□□□□□ -0.34
PTPN20-220ENST00000508715 ATG9AQ7Z3C6 839 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms