RNA–Protein interactions for RNA: ENST00000508668.1

HMGN1P11-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 11, humanhuman

BASIC

Gene HMGN1P11, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P11-201ENST00000508668 USP17L13C9JLJ4 530 aa5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 USP17L12C9JPN9 530 aa5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 USP17L11C9JVI0 530 aa5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 USP17L21D6R901 530 aa5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 USP17L18D6R9N7 530 aa5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 USP17L22D6RA61 530 aa5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 USP17L17D6RBQ6 530 aa5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 USP17L19D6RCP7 530 aa5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 USP17L20D6RJB6 530 aa5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 MEN1O00255 615 aa5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 USP17L24Q0WX57 530 aa5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 SCARF1Q14162 830 aa5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 CRTC2Q53ET0 693 aaPredicted RBP5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 TMEM132EQ6IEE7 984 aa5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 KRT28Q7Z3Y7 464 aa5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 TRIM46Q7Z4K8 759 aa5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 KDF1Q8NAX2 398 aaPredicted RBP5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 NGDNQ8NEJ9 315 aaKnown RBP5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 TPCN2Q8NHX9 752 aa5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 RBM19Q9Y4C8 960 aaKnown RBP5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 ROBO2Q9HCK4 1378 aa5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 CDK12Q9NYV4 1490 aaPredicted RBP5.39□□□□□ -1.55
HMGN1P11-201ENST00000508668 NEXMIFQ5QGS0 1516 aa5.38□□□□□ -1.55
HMGN1P11-201ENST00000508668 LRP6O75581 1613 aa5.38□□□□□ -1.55
HMGN1P11-201ENST00000508668 A0A1W2PRU2 124 aa5.38□□□□□ -1.55
HMGN1P11-201ENST00000508668 GNRH1P01148 92 aa5.38□□□□□ -1.55
HMGN1P11-201ENST00000508668 GDF10P55107 478 aa5.38□□□□□ -1.55
HMGN1P11-201ENST00000508668 CCDC102BQ68D86 513 aa5.38□□□□□ -1.55
HMGN1P11-201ENST00000508668 WAPLQ7Z5K2 1190 aa5.38□□□□□ -1.55
HMGN1P11-201ENST00000508668 LARGE2Q8N3Y3 721 aa5.38□□□□□ -1.55
HMGN1P11-201ENST00000508668 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGN1P11-201ENST00000508668 DCAF11Q8TEB1 546 aa5.38□□□□□ -1.55
HMGN1P11-201ENST00000508668 PRAM1Q96QH2 718 aa5.38□□□□□ -1.55
HMGN1P11-201ENST00000508668 INSM2Q96T92 566 aaPredicted RBP5.38□□□□□ -1.55
HMGN1P11-201ENST00000508668 ETNK1Q9HBU6 452 aa5.38□□□□□ -1.55
HMGN1P11-201ENST00000508668 POLMQ9NP87 494 aaPredicted RBP5.38□□□□□ -1.55
HMGN1P11-201ENST00000508668 ATP13A2Q9NQ11 1180 aa5.38□□□□□ -1.55
HMGN1P11-201ENST00000508668 SOS2Q07890 1332 aaPredicted RBP5.38□□□□□ -1.55
HMGN1P11-201ENST00000508668 XRN1Q8IZH2 1706 aaKnown RBP5.37□□□□□ -1.55
HMGN1P11-201ENST00000508668 FAM196BA6NMK8 535 aa5.37□□□□□ -1.55
HMGN1P11-201ENST00000508668 ZBTB7BO15156 539 aaPredicted RBP5.37□□□□□ -1.55
HMGN1P11-201ENST00000508668 SCNN1DP51172 638 aa5.37□□□□□ -1.55
HMGN1P11-201ENST00000508668 EVA1CP58658 441 aa5.37□□□□□ -1.55
HMGN1P11-201ENST00000508668 SRPK2P78362 688 aaKnown RBP5.37□□□□□ -1.55
HMGN1P11-201ENST00000508668 DPYDQ12882 1025 aa5.37□□□□□ -1.55
HMGN1P11-201ENST00000508668 PTK7Q13308 1070 aa5.37□□□□□ -1.55
HMGN1P11-201ENST00000508668 UNC5CLQ8IV45 518 aa5.37□□□□□ -1.55
HMGN1P11-201ENST00000508668 ZFP42Q96MM3 310 aa5.37□□□□□ -1.55
HMGN1P11-201ENST00000508668 NLRP3Q96P20 1036 aa5.37□□□□□ -1.55
HMGN1P11-201ENST00000508668 STK17AQ9UEE5 414 aa5.37□□□□□ -1.55
HMGN1P11-201ENST00000508668 SERTAD1Q9UHV2 236 aa5.37□□□□□ -1.55
HMGN1P11-201ENST00000508668 NOVA2Q9UNW9 492 aaKnown RBP5.37□□□□□ -1.55
HMGN1P11-201ENST00000508668 ADGRF5Q8IZF2 1346 aa5.37□□□□□ -1.55
HMGN1P11-201ENST00000508668 ARHGEF10O15013 1369 aa5.37□□□□□ -1.55
HMGN1P11-201ENST00000508668 SFI1A8K8P3 1242 aa5.36□□□□□ -1.55
HMGN1P11-201ENST00000508668 TMEM229AB2RXF0 380 aa5.36□□□□□ -1.55
HMGN1P11-201ENST00000508668 SPINT1O43278 529 aa5.36□□□□□ -1.55
HMGN1P11-201ENST00000508668 IL2RAP01589 272 aa5.36□□□□□ -1.55
HMGN1P11-201ENST00000508668 INHAP05111 366 aa5.36□□□□□ -1.55
HMGN1P11-201ENST00000508668 CTSOP43234 321 aaPredicted RBP5.36□□□□□ -1.55
HMGN1P11-201ENST00000508668 CLN3Q13286 438 aa5.36□□□□□ -1.55
HMGN1P11-201ENST00000508668 TREML4Q6UXN2 200 aa5.36□□□□□ -1.55
HMGN1P11-201ENST00000508668 ANKMY2Q8IV38 441 aa5.36□□□□□ -1.55
HMGN1P11-201ENST00000508668 SIX5Q8N196 739 aa5.36□□□□□ -1.55
HMGN1P11-201ENST00000508668 PMFBP1Q8TBY8 1022 aa5.36□□□□□ -1.55
HMGN1P11-201ENST00000508668 CNKSR1Q969H4 720 aa5.36□□□□□ -1.55
HMGN1P11-201ENST00000508668 ZNF358Q9NW07 568 aa5.36□□□□□ -1.55
HMGN1P11-201ENST00000508668 TRAK1Q9UPV9 953 aa5.36□□□□□ -1.55
HMGN1P11-201ENST00000508668 ABCC11Q96J66 1382 aa5.36□□□□□ -1.55
HMGN1P11-201ENST00000508668 YTHDC2Q9H6S0 1430 aaKnown RBP5.36□□□□□ -1.55
HMGN1P11-201ENST00000508668 NHSL1Q5SYE7 1610 aa5.36□□□□□ -1.55
HMGN1P11-201ENST00000508668 NALCNQ8IZF0 1738 aa5.35□□□□□ -1.55
HMGN1P11-201ENST00000508668 NRXN3Q9Y4C0 1643 aa5.35□□□□□ -1.55
HMGN1P11-201ENST00000508668 CDC42BPGQ6DT37 1551 aa5.35□□□□□ -1.55
HMGN1P11-201ENST00000508668 ATG7O95352 703 aa5.35□□□□□ -1.55
HMGN1P11-201ENST00000508668 BAG6P46379 1132 aa5.35□□□□□ -1.55
HMGN1P11-201ENST00000508668 SEC13P55735 322 aa5.35□□□□□ -1.55
HMGN1P11-201ENST00000508668 INSM1Q01101 510 aaPredicted RBP5.35□□□□□ -1.55
HMGN1P11-201ENST00000508668 TLR1Q15399 786 aa5.35□□□□□ -1.55
HMGN1P11-201ENST00000508668 FAM200AQ8TCP9 573 aa5.35□□□□□ -1.55
HMGN1P11-201ENST00000508668 ESYT1Q9BSJ8 1104 aa5.35□□□□□ -1.55
HMGN1P11-201ENST00000508668 HIRIP3Q9BW71 556 aaPredicted RBP5.35□□□□□ -1.55
HMGN1P11-201ENST00000508668 C14orf93Q9H972 538 aaKnown RBP5.35□□□□□ -1.55
HMGN1P11-201ENST00000508668 GMPR2Q9P2T1 348 aaKnown RBP5.35□□□□□ -1.55
HMGN1P11-201ENST00000508668 ZMIZ1Q9ULJ6 1067 aa5.35□□□□□ -1.55
HMGN1P11-201ENST00000508668 RGS12O14924 1447 aa5.34□□□□□ -1.55
HMGN1P11-201ENST00000508668 SPATA31A3Q5VYP0 1347 aa5.34□□□□□ -1.55
HMGN1P11-201ENST00000508668 ZBTB7CA1YPR0 619 aa5.34□□□□□ -1.55
HMGN1P11-201ENST00000508668 FIGNL2A6NMB9 653 aa5.34□□□□□ -1.55
HMGN1P11-201ENST00000508668 TTLL8A6PVC2 850 aa5.34□□□□□ -1.55
HMGN1P11-201ENST00000508668 BACH1O14867 736 aa5.34□□□□□ -1.55
HMGN1P11-201ENST00000508668 LGR5O75473 907 aa5.34□□□□□ -1.55
HMGN1P11-201ENST00000508668 SLC27A3Q5K4L6 730 aa5.34□□□□□ -1.55
HMGN1P11-201ENST00000508668 FOXD4L5Q5VV16 416 aaPredicted RBP5.34□□□□□ -1.55
HMGN1P11-201ENST00000508668 KRT27Q7Z3Y8 459 aa5.34□□□□□ -1.55
HMGN1P11-201ENST00000508668 TSEN2Q8NCE0 465 aaKnown RBP5.34□□□□□ -1.55
HMGN1P11-201ENST00000508668 STK32AQ8WU08 396 aa5.34□□□□□ -1.55
HMGN1P11-201ENST00000508668 XAGE2Q96GT9 111 aa5.34□□□□□ -1.55
HMGN1P11-201ENST00000508668 ARXQ96QS3 562 aa5.34□□□□□ -1.55
HMGN1P11-201ENST00000508668 PRDM11Q9NQV5 511 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms