RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 ZFATQ9P243 1243 aa7.46□□□□□ -1.22
GYPB-209ENST00000508618 FAM196BA6NMK8 535 aa7.45□□□□□ -1.22
GYPB-209ENST00000508618 HOXD8P13378 290 aaPredicted RBP7.45□□□□□ -1.22
GYPB-209ENST00000508618 ELMSAN1Q6PJG2 1045 aa7.45□□□□□ -1.22
GYPB-209ENST00000508618 LARP1Q6PKG0 1096 aaKnown RBP7.45□□□□□ -1.22
GYPB-209ENST00000508618 DCAF11Q8TEB1 546 aa7.45□□□□□ -1.22
GYPB-209ENST00000508618 GLMNQ92990 594 aa7.45□□□□□ -1.22
GYPB-209ENST00000508618 MYO19Q96H55 970 aa7.45□□□□□ -1.22
GYPB-209ENST00000508618 ZBTB42B2RXF5 422 aa7.44□□□□□ -1.22
GYPB-209ENST00000508618 DLL1O00548 723 aa7.44□□□□□ -1.22
GYPB-209ENST00000508618 FOXO3O43524 673 aa7.44□□□□□ -1.22
GYPB-209ENST00000508618 EGFRP00533 1210 aa7.44□□□□□ -1.22
GYPB-209ENST00000508618 IREB2P48200 963 aaKnown RBP7.44□□□□□ -1.22
GYPB-209ENST00000508618 CRTC2Q53ET0 693 aaPredicted RBP7.44□□□□□ -1.22
GYPB-209ENST00000508618 PRR23CQ6ZRP0 262 aa7.44□□□□□ -1.22
GYPB-209ENST00000508618 QTRT2Q9H974 415 aaKnown RBP7.44□□□□□ -1.22
GYPB-209ENST00000508618 TFIP11Q9UBB9 837 aaKnown RBP7.44□□□□□ -1.22
GYPB-209ENST00000508618 DEAF1O75398 565 aaPredicted RBP7.43□□□□□ -1.22
GYPB-209ENST00000508618 RARAP10276 462 aa7.43□□□□□ -1.22
GYPB-209ENST00000508618 Q6ZS46 218 aa7.43□□□□□ -1.22
GYPB-209ENST00000508618 DZIP1LQ8IYY4 767 aaKnown RBP7.43□□□□□ -1.22
GYPB-209ENST00000508618 FNBP4Q8N3X1 1017 aaPredicted RBP7.43□□□□□ -1.22
GYPB-209ENST00000508618 IFT43Q96FT9 208 aa7.43□□□□□ -1.22
GYPB-209ENST00000508618 MEGF10Q96KG7 1140 aa7.43□□□□□ -1.22
GYPB-209ENST00000508618 USP17L15C9J2P7 530 aa7.42□□□□□ -1.22
GYPB-209ENST00000508618 USP17L10C9JJH3 530 aa7.42□□□□□ -1.22
GYPB-209ENST00000508618 USP17L13C9JLJ4 530 aa7.42□□□□□ -1.22
GYPB-209ENST00000508618 USP17L12C9JPN9 530 aa7.42□□□□□ -1.22
GYPB-209ENST00000508618 USP17L11C9JVI0 530 aa7.42□□□□□ -1.22
GYPB-209ENST00000508618 USP17L21D6R901 530 aa7.42□□□□□ -1.22
GYPB-209ENST00000508618 USP17L18D6R9N7 530 aa7.42□□□□□ -1.22
GYPB-209ENST00000508618 USP17L22D6RA61 530 aa7.42□□□□□ -1.22
GYPB-209ENST00000508618 USP17L17D6RBQ6 530 aa7.42□□□□□ -1.22
GYPB-209ENST00000508618 USP17L19D6RCP7 530 aa7.42□□□□□ -1.22
GYPB-209ENST00000508618 USP17L20D6RJB6 530 aa7.42□□□□□ -1.22
GYPB-209ENST00000508618 WEE1P30291 646 aa7.42□□□□□ -1.22
GYPB-209ENST00000508618 SOX18P35713 384 aa7.42□□□□□ -1.22
GYPB-209ENST00000508618 USP17L24Q0WX57 530 aa7.42□□□□□ -1.22
GYPB-209ENST00000508618 DPYDQ12882 1025 aa7.42□□□□□ -1.22
GYPB-209ENST00000508618 DGKZQ13574 1117 aa7.42□□□□□ -1.22
GYPB-209ENST00000508618 KANK4Q5T7N3 995 aaPredicted RBP7.42□□□□□ -1.22
GYPB-209ENST00000508618 MAP4K3Q8IVH8 894 aa7.42□□□□□ -1.22
GYPB-209ENST00000508618 HINFPQ9BQA5 517 aa7.42□□□□□ -1.22
GYPB-209ENST00000508618 KLK14Q9P0G3 267 aa7.42□□□□□ -1.22
GYPB-209ENST00000508618 PLAURQ03405 335 aa7.41□□□□□ -1.22
GYPB-209ENST00000508618 PROSER2Q86WR7 435 aaPredicted RBP7.41□□□□□ -1.22
GYPB-209ENST00000508618 ANKMY2Q8IV38 441 aa7.41□□□□□ -1.22
GYPB-209ENST00000508618 TMEM130Q8N3G9 435 aa7.41□□□□□ -1.22
GYPB-209ENST00000508618 MRPL18Q9H0U6 180 aaKnown RBP7.41□□□□□ -1.22
GYPB-209ENST00000508618 SMG9Q9H0W8 520 aaKnown RBP7.41□□□□□ -1.22
GYPB-209ENST00000508618 TLR7Q9NYK1 1049 aaKnown RBP7.41□□□□□ -1.22
GYPB-209ENST00000508618 MICAL2O94851 1124 aa7.4□□□□□ -1.22
GYPB-209ENST00000508618 EIF2AK2P19525 551 aaKnown RBP7.4□□□□□ -1.22
GYPB-209ENST00000508618 C11orf91Q3C1V1 193 aa7.4□□□□□ -1.22
GYPB-209ENST00000508618 KRT25Q7Z3Z0 450 aa7.4□□□□□ -1.22
GYPB-209ENST00000508618 KRTAP19-1Q8IUB9 90 aa7.4□□□□□ -1.22
GYPB-209ENST00000508618 TARSP26639 723 aaKnown RBP7.39□□□□□ -1.23
GYPB-209ENST00000508618 MCTP1Q6DN14 999 aa7.39□□□□□ -1.23
GYPB-209ENST00000508618 CACTIN-AS1Q8N1I8 211 aa7.39□□□□□ -1.23
GYPB-209ENST00000508618 ARXQ96QS3 562 aa7.39□□□□□ -1.23
GYPB-209ENST00000508618 PPP1R12CQ9BZL4 782 aa7.39□□□□□ -1.23
GYPB-209ENST00000508618 AKTIPQ9H8T0 292 aa7.39□□□□□ -1.23
GYPB-209ENST00000508618 F8W735 103 aaPredicted RBP7.38□□□□□ -1.23
GYPB-209ENST00000508618 SASH3O75995 380 aa7.38□□□□□ -1.23
GYPB-209ENST00000508618 FSTP19883 344 aa7.38□□□□□ -1.23
GYPB-209ENST00000508618 MLLT1Q03111 559 aaPredicted RBP7.38□□□□□ -1.23
GYPB-209ENST00000508618 CD97P48960 835 aa7.37□□□□□ -1.23
GYPB-209ENST00000508618 PLD4Q96BZ4 506 aa7.37□□□□□ -1.23
GYPB-209ENST00000508618 GOLGA2P5Q9HBQ8 144 aa7.37□□□□□ -1.23
GYPB-209ENST00000508618 RTCBQ9Y3I0 505 aaKnown RBP7.37□□□□□ -1.23
GYPB-209ENST00000508618 GSC2O15499 205 aa7.36□□□□□ -1.23
GYPB-209ENST00000508618 XYLBO75191 536 aa7.36□□□□□ -1.23
GYPB-209ENST00000508618 VTI1AQ96AJ9 217 aa7.36□□□□□ -1.23
GYPB-209ENST00000508618 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.36□□□□□ -1.232e-23■■■■■ 397.5
GYPB-209ENST00000508618 OPLAHO14841 1288 aa7.35□□□□□ -1.23
GYPB-209ENST00000508618 PSAPP07602 524 aa7.35□□□□□ -1.23
GYPB-209ENST00000508618 MUC3BQ9H195 1237 aa7.35□□□□□ -1.23
GYPB-209ENST00000508618 RBSNQ9H1K0 784 aa7.35□□□□□ -1.23
GYPB-209ENST00000508618 PCMTD2Q9NV79 361 aa7.35□□□□□ -1.23
GYPB-209ENST00000508618 LOC102724428A0A0B4J2F2 783 aa7.34□□□□□ -1.23
GYPB-209ENST00000508618 BTBD11A6QL63 1104 aa7.34□□□□□ -1.23
GYPB-209ENST00000508618 KIAA1324LA8MWY0 1029 aaPredicted RBP7.34□□□□□ -1.23
GYPB-209ENST00000508618 SIK1P57059 783 aa7.34□□□□□ -1.23
GYPB-209ENST00000508618 VRTNQ9H8Y1 702 aa7.34□□□□□ -1.23
GYPB-209ENST00000508618 LRFN2Q9ULH4 789 aa7.34□□□□□ -1.23
GYPB-209ENST00000508618 KCNMB2Q9Y691 235 aa7.34□□□□□ -1.23
GYPB-209ENST00000508618 COL17A1Q9UMD9 1497 aaPredicted RBP7.34□□□□□ -1.23
GYPB-209ENST00000508618 GHRHP01286 108 aa7.33□□□□□ -1.24
GYPB-209ENST00000508618 SETDB1Q15047 1291 aa7.33□□□□□ -1.24
GYPB-209ENST00000508618 HFE2Q6ZVN8 426 aa7.33□□□□□ -1.24
GYPB-209ENST00000508618 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.33□□□□□ -1.24
GYPB-209ENST00000508618 TREML1Q86YW5 311 aa7.33□□□□□ -1.24
GYPB-209ENST00000508618 MMP20O60882 483 aa7.32□□□□□ -1.24
GYPB-209ENST00000508618 LGR5O75473 907 aa7.32□□□□□ -1.24
GYPB-209ENST00000508618 IL22RA1Q8N6P7 574 aa7.32□□□□□ -1.24
GYPB-209ENST00000508618 CLUAP1Q96AJ1 413 aa7.32□□□□□ -1.24
GYPB-209ENST00000508618 CALR3Q96L12 384 aaKnown RBP7.32□□□□□ -1.24
GYPB-209ENST00000508618 PTCD1O75127 700 aaKnown RBP7.31□□□□□ -1.24
GYPB-209ENST00000508618 UVSSAQ2YD98 709 aa7.31□□□□□ -1.24
GYPB-209ENST00000508618 RGL4Q8IZJ4 473 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms