RNA–Protein interactions for RNA: ENST00000508416.1

SKI-204, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 252 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-204ENST00000508416 ZKSCAN2Q63HK3 967 aa13.34□□□□□ -0.27
SKI-204ENST00000508416 C7orf43Q8WVR3 580 aa13.34□□□□□ -0.27
SKI-204ENST00000508416 CCDC85AQ96PX6 553 aaPredicted RBP13.34□□□□□ -0.27
SKI-204ENST00000508416 MYH3P11055 1940 aa13.34□□□□□ -0.27
SKI-204ENST00000508416 ABCC4O15439 1325 aa13.34□□□□□ -0.27
SKI-204ENST00000508416 BBOX1O75936 387 aa13.33□□□□□ -0.28
SKI-204ENST00000508416 CCDC152Q4G0S7 254 aa13.33□□□□□ -0.28
SKI-204ENST00000508416 ATF7IPQ6VMQ6 1270 aa13.33□□□□□ -0.28
SKI-204ENST00000508416 TTLL11Q8NHH1 800 aa13.33□□□□□ -0.28
SKI-204ENST00000508416 PLA2G12BQ9BX93 195 aa13.33□□□□□ -0.28
SKI-204ENST00000508416 RCAN3Q9UKA8 241 aa13.33□□□□□ -0.28
SKI-204ENST00000508416 PPEF1O14829 653 aaPredicted RBP13.32□□□□□ -0.28
SKI-204ENST00000508416 NBPF7P0C2Y1 421 aaPredicted RBP13.32□□□□□ -0.28
SKI-204ENST00000508416 TRIM27P14373 513 aa13.32□□□□□ -0.28
SKI-204ENST00000508416 CTSWP56202 376 aa13.32□□□□□ -0.28
SKI-204ENST00000508416 GRAPQ13588 217 aa13.32□□□□□ -0.28
SKI-204ENST00000508416 SOGA3Q5TF21 947 aa13.32□□□□□ -0.28
SKI-204ENST00000508416 OLFM4Q6UX06 510 aa13.32□□□□□ -0.28
SKI-204ENST00000508416 GRAPLQ8TC17 118 aaPredicted RBP13.32□□□□□ -0.28
SKI-204ENST00000508416 CLUAP1Q96AJ1 413 aa13.32□□□□□ -0.28
SKI-204ENST00000508416 USP44Q9H0E7 712 aa13.32□□□□□ -0.28
SKI-204ENST00000508416 SEC31BQ9NQW1 1179 aa13.32□□□□□ -0.28
SKI-204ENST00000508416 TNNQ9UQP3 1299 aa13.32□□□□□ -0.28
SKI-204ENST00000508416 RPS8P62241 208 aaKnown RBP13.31□□□□□ -0.28
SKI-204ENST00000508416 FOXO4P98177 505 aa13.31□□□□□ -0.28
SKI-204ENST00000508416 CCDC93Q567U6 631 aa13.31□□□□□ -0.28
SKI-204ENST00000508416 INTS3Q68E01 1043 aaKnown RBP13.31□□□□□ -0.28
SKI-204ENST00000508416 CC2D2BQ6DHV5 1058 aa13.31□□□□□ -0.28
SKI-204ENST00000508416 CELF1Q92879 486 aaKnown RBP13.31□□□□□ -0.28
SKI-204ENST00000508416 TMX4Q9H1E5 349 aaPredicted RBP13.31□□□□□ -0.28
SKI-204ENST00000508416 ATP6V0A2Q9Y487 856 aa13.31□□□□□ -0.28
SKI-204ENST00000508416 UTYO14607 1347 aa13.31□□□□□ -0.28
SKI-204ENST00000508416 CCDC88AQ3V6T2 1871 aa13.31□□□□□ -0.28
SKI-204ENST00000508416 CEP350Q5VT06 3117 aa13.3□□□□□ -0.28
SKI-204ENST00000508416 SBF1O95248 1867 aa13.3□□□□□ -0.28
SKI-204ENST00000508416 FER1L6Q2WGJ9 1857 aa13.3□□□□□ -0.28
SKI-204ENST00000508416 CSF1RP07333 972 aa13.3□□□□□ -0.28
SKI-204ENST00000508416 EPHA10Q5JZY3 1008 aa13.3□□□□□ -0.28
SKI-204ENST00000508416 SP8Q8IXZ3 490 aa13.3□□□□□ -0.28
SKI-204ENST00000508416 RTKN2Q8IZC4 609 aa13.3□□□□□ -0.28
SKI-204ENST00000508416 SUCLG2Q96I99 432 aa13.3□□□□□ -0.28
SKI-204ENST00000508416 GREM2Q9H772 168 aa13.3□□□□□ -0.28
SKI-204ENST00000508416 NFKBIEO00221 500 aa13.29□□□□□ -0.28
SKI-204ENST00000508416 RASSF7Q02833 373 aa13.29□□□□□ -0.28
SKI-204ENST00000508416 LMBR1LQ6UX01 489 aa13.29□□□□□ -0.28
SKI-204ENST00000508416 TMC4Q7Z404 712 aa13.29□□□□□ -0.28
SKI-204ENST00000508416 GRIPAP1Q4V328 841 aa13.28□□□□□ -0.28
SKI-204ENST00000508416 C9orf131Q5VYM1 1079 aa13.28□□□□□ -0.28
SKI-204ENST00000508416 SLC51AQ86UW1 340 aa13.28□□□□□ -0.28
SKI-204ENST00000508416 ANKRD18AQ8IVF6 992 aa13.28□□□□□ -0.28
SKI-204ENST00000508416 FTSJ3Q8IY81 847 aaKnown RBP13.28□□□□□ -0.28
SKI-204ENST00000508416 DZIP1LQ8IYY4 767 aaKnown RBP13.28□□□□□ -0.28
SKI-204ENST00000508416 TMEM57Q8N5G2 664 aa13.28□□□□□ -0.28
SKI-204ENST00000508416 KAZALD1Q96I82 304 aa13.28□□□□□ -0.28
SKI-204ENST00000508416 CDC5LQ99459 802 aaKnown RBP13.28□□□□□ -0.28
SKI-204ENST00000508416 TAOK3Q9H2K8 898 aa13.28□□□□□ -0.28
SKI-204ENST00000508416 CHMP3Q9Y3E7 222 aa13.28□□□□□ -0.28
SKI-204ENST00000508416 RTL9Q8NET4 1388 aa13.28□□□□□ -0.28
SKI-204ENST00000508416 UBTFL1P0CB47 393 aaPredicted RBP13.27□□□□□ -0.29
SKI-204ENST00000508416 LMNB1P20700 586 aa13.27□□□□□ -0.29
SKI-204ENST00000508416 ITGA6P23229 1130 aa13.27□□□□□ -0.29
SKI-204ENST00000508416 FKBP4Q02790 459 aaKnown RBP eCLIP13.27□□□□□ -0.291e-6■■■□□ 15.7
SKI-204ENST00000508416 FAM161AQ3B820 660 aa13.27□□□□□ -0.29
SKI-204ENST00000508416 LTBP3Q9NS15 1303 aa13.27□□□□□ -0.29
SKI-204ENST00000508416 COL4A1P02462 1669 aa13.27□□□□□ -0.29
SKI-204ENST00000508416 ANKRD18BA2A2Z9 1011 aa13.26□□□□□ -0.29
SKI-204ENST00000508416 MS4A1P11836 297 aa13.26□□□□□ -0.29
SKI-204ENST00000508416 RLBP1P12271 317 aa13.26□□□□□ -0.29
SKI-204ENST00000508416 PRELPP51888 382 aa13.26□□□□□ -0.29
SKI-204ENST00000508416 IFIT5Q13325 482 aaKnown RBP13.26□□□□□ -0.29
SKI-204ENST00000508416 MPNDQ8N594 471 aa13.26□□□□□ -0.29
SKI-204ENST00000508416 MEIS3Q99687 375 aa13.26□□□□□ -0.29
SKI-204ENST00000508416 BICC1Q9H694 974 aaKnown RBP13.26□□□□□ -0.29
SKI-204ENST00000508416 RNF181Q9P0P0 153 aa13.26□□□□□ -0.29
SKI-204ENST00000508416 HDAC5Q9UQL6 1122 aa13.26□□□□□ -0.29
SKI-204ENST00000508416 SPEF2Q9C093 1822 aa13.25□□□□□ -0.29
SKI-204ENST00000508416 PLIN1O60240 522 aa13.25□□□□□ -0.29
SKI-204ENST00000508416 GNAI3P08754 354 aa13.25□□□□□ -0.29
SKI-204ENST00000508416 IGHMBP2P38935 993 aaKnown RBP13.25□□□□□ -0.29
SKI-204ENST00000508416 CCDC57Q2TAC2 916 aa13.25□□□□□ -0.29
SKI-204ENST00000508416 DPP8Q6V1X1 898 aaPredicted RBP13.25□□□□□ -0.29
SKI-204ENST00000508416 ANKRD44Q8N8A2 993 aa13.25□□□□□ -0.29
SKI-204ENST00000508416 PANK1Q8TE04 598 aa13.25□□□□□ -0.29
SKI-204ENST00000508416 PSMD1Q99460 953 aa13.25□□□□□ -0.29
SKI-204ENST00000508416 ZNF277Q9NRM2 450 aaPredicted RBP13.25□□□□□ -0.29
SKI-204ENST00000508416 NSFL1CQ9UNZ2 370 aaKnown RBP13.25□□□□□ -0.29
SKI-204ENST00000508416 SNED1Q8TER0 1413 aa13.24□□□□□ -0.29
SKI-204ENST00000508416 DICER1Q9UPY3 1922 aaKnown RBP13.24□□□□□ -0.29
SKI-204ENST00000508416 RABL6Q3YEC7 729 aaPredicted RBP13.24□□□□□ -0.29
SKI-204ENST00000508416 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.24□□□□□ -0.29
SKI-204ENST00000508416 MPHOSPH8Q99549 860 aa13.24□□□□□ -0.29
SKI-204ENST00000508416 BSDC1Q9NW68 430 aaPredicted RBP13.24□□□□□ -0.29
SKI-204ENST00000508416 LRRFIP2Q9Y608 721 aaKnown RBP13.24□□□□□ -0.29
SKI-204ENST00000508416 LRRC37AA6NMS7 1700 aa13.23□□□□□ -0.29
SKI-204ENST00000508416 GPSM2P81274 684 aa13.23□□□□□ -0.29
SKI-204ENST00000508416 TAF7LQ5H9L4 462 aa13.23□□□□□ -0.29
SKI-204ENST00000508416 ITPRIPQ8IWB1 547 aa13.23□□□□□ -0.29
SKI-204ENST00000508416 SUPT20HQ8NEM7 779 aa13.23□□□□□ -0.29
SKI-204ENST00000508416 ZNF594Q96JF6 807 aaPredicted RBP13.23□□□□□ -0.29
SKI-204ENST00000508416 ANKIB1Q9P2G1 1089 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms