RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 PPIP5K2O43314 1243 aa18.41■□□□□ 0.54
RAB28-205ENST00000508274 BBOX1O75936 387 aa18.41■□□□□ 0.54
RAB28-205ENST00000508274 TWISTNBQ3B726 338 aaPredicted RBP18.41■□□□□ 0.54
RAB28-205ENST00000508274 SP8Q8IXZ3 490 aa18.41■□□□□ 0.54
RAB28-205ENST00000508274 TMX4Q9H1E5 349 aaPredicted RBP18.41■□□□□ 0.54
RAB28-205ENST00000508274 SF3B3Q15393 1217 aaKnown RBP18.4■□□□□ 0.54
RAB28-205ENST00000508274 CHADLQ6NUI6 762 aa18.4■□□□□ 0.54
RAB28-205ENST00000508274 GPC2Q8N158 579 aa18.4■□□□□ 0.54
RAB28-205ENST00000508274 CELF1Q92879 486 aaKnown RBP18.4■□□□□ 0.54
RAB28-205ENST00000508274 GJA3Q9Y6H8 435 aa18.4■□□□□ 0.54
RAB28-205ENST00000508274 IL16Q14005 1332 aa18.4■□□□□ 0.54
RAB28-205ENST00000508274 FANCIQ9NVI1 1328 aa18.4■□□□□ 0.54
RAB28-205ENST00000508274 EIF6P56537 245 aaKnown RBP18.39■□□□□ 0.53
RAB28-205ENST00000508274 DPP8Q6V1X1 898 aaPredicted RBP18.39■□□□□ 0.53
RAB28-205ENST00000508274 FAM9BQ8IZU0 186 aa18.39■□□□□ 0.53
RAB28-205ENST00000508274 MPNDQ8N594 471 aa18.39■□□□□ 0.53
RAB28-205ENST00000508274 ZBTB38Q8NAP3 1195 aaPredicted RBP18.39■□□□□ 0.53
RAB28-205ENST00000508274 JARID2Q92833 1246 aaPredicted RBP18.39■□□□□ 0.53
RAB28-205ENST00000508274 RTFDC1Q9BY42 306 aaPredicted RBP18.39■□□□□ 0.53
RAB28-205ENST00000508274 HACL1Q9UJ83 578 aa18.39■□□□□ 0.53
RAB28-205ENST00000508274 MAP3K2Q9Y2U5 619 aa18.39■□□□□ 0.53
RAB28-205ENST00000508274 EAPPQ56P03 285 aaPredicted RBP18.38■□□□□ 0.53
RAB28-205ENST00000508274 G2E3Q7L622 706 aa18.38■□□□□ 0.53
RAB28-205ENST00000508274 NIM1KQ8IY84 436 aa18.38■□□□□ 0.53
RAB28-205ENST00000508274 KLRG1Q96E93 195 aa18.38■□□□□ 0.53
RAB28-205ENST00000508274 METTL22Q9BUU2 404 aaPredicted RBP18.38■□□□□ 0.53
RAB28-205ENST00000508274 PI4KAP2A4QPH2 592 aa18.38■□□□□ 0.53
RAB28-205ENST00000508274 DDX58O95786 925 aaKnown RBP18.38■□□□□ 0.53
RAB28-205ENST00000508274 EPHX2P34913 555 aa18.38■□□□□ 0.53
RAB28-205ENST00000508274 LDHDQ86WU2 507 aa18.38■□□□□ 0.53
RAB28-205ENST00000508274 PI4KAP1Q8N8J0 262 aa18.38■□□□□ 0.53
RAB28-205ENST00000508274 CCDC191Q8NCU4 936 aa18.38■□□□□ 0.53
RAB28-205ENST00000508274 STK31Q9BXU1 1019 aa18.38■□□□□ 0.53
RAB28-205ENST00000508274 SUPT20HQ8NEM7 779 aa18.37■□□□□ 0.53
RAB28-205ENST00000508274 CHMP4AQ9BY43 222 aa18.37■□□□□ 0.53
RAB28-205ENST00000508274 CWC25Q9NXE8 425 aaPredicted RBP18.37■□□□□ 0.53
RAB28-205ENST00000508274 SCNN1DP51172 638 aa18.36■□□□□ 0.53
RAB28-205ENST00000508274 KSR2Q6VAB6 950 aa18.36■□□□□ 0.53
RAB28-205ENST00000508274 SPINK5Q9NQ38 1064 aaPredicted RBP18.36■□□□□ 0.53
RAB28-205ENST00000508274 CACNA1FO60840 1977 aa18.35■□□□□ 0.53
RAB28-205ENST00000508274 SLC4A2P04920 1241 aa18.35■□□□□ 0.53
RAB28-205ENST00000508274 PCCAP05165 728 aaPredicted RBP18.35■□□□□ 0.53
RAB28-205ENST00000508274 IGKV5-2P06315 115 aa18.35■□□□□ 0.53
RAB28-205ENST00000508274 HOXD11P31277 338 aaPredicted RBP18.35■□□□□ 0.53
RAB28-205ENST00000508274 WDR63Q8IWG1 891 aa18.35■□□□□ 0.53
RAB28-205ENST00000508274 VPS33BQ9H267 617 aa18.35■□□□□ 0.53
RAB28-205ENST00000508274 SEC31BQ9NQW1 1179 aa18.35■□□□□ 0.53
RAB28-205ENST00000508274 MYH3P11055 1940 aa18.35■□□□□ 0.53
RAB28-205ENST00000508274 KIAA2012Q0VF49 1180 aa18.34■□□□□ 0.53
RAB28-205ENST00000508274 TMC4Q7Z404 712 aa18.34■□□□□ 0.53
RAB28-205ENST00000508274 CCDC85AQ96PX6 553 aaPredicted RBP18.34■□□□□ 0.53
RAB28-205ENST00000508274 RNF216Q9NWF9 866 aaPredicted RBP18.34■□□□□ 0.53
RAB28-205ENST00000508274 EPS15P42566 896 aa18.34■□□□□ 0.53
RAB28-205ENST00000508274 EXOSC9Q06265 439 aaKnown RBP18.34■□□□□ 0.53
RAB28-205ENST00000508274 ZNRF3Q9ULT6 936 aa18.34■□□□□ 0.53
RAB28-205ENST00000508274 SPEF2Q9C093 1822 aa18.33■□□□□ 0.52
RAB28-205ENST00000508274 PASKQ96RG2 1323 aa18.33■□□□□ 0.52
RAB28-205ENST00000508274 PDE8AO60658 829 aa18.33■□□□□ 0.52
RAB28-205ENST00000508274 GPSM2P81274 684 aa18.33■□□□□ 0.52
RAB28-205ENST00000508274 CXCL9Q07325 125 aa18.33■□□□□ 0.52
RAB28-205ENST00000508274 CWF19L2Q2TBE0 894 aaKnown RBP18.33■□□□□ 0.52
RAB28-205ENST00000508274 NSFL1CQ9UNZ2 370 aaKnown RBP18.33■□□□□ 0.52
RAB28-205ENST00000508274 CLEC11AQ9Y240 323 aa18.33■□□□□ 0.52
RAB28-205ENST00000508274 VAMP4O75379 141 aa18.32■□□□□ 0.52
RAB28-205ENST00000508274 LMOD1P29536 600 aaPredicted RBP18.32■□□□□ 0.52
RAB28-205ENST00000508274 RPS8P62241 208 aaKnown RBP18.32■□□□□ 0.52
RAB28-205ENST00000508274 FLIIQ13045 1269 aa18.32■□□□□ 0.52
RAB28-205ENST00000508274 PNMA8AQ86V59 439 aaPredicted RBP18.32■□□□□ 0.52
RAB28-205ENST00000508274 CDHR2Q9BYE9 1310 aa18.31■□□□□ 0.52
RAB28-205ENST00000508274 YDJCA8MPS7 323 aa18.31■□□□□ 0.52
RAB28-205ENST00000508274 NEURL1BA8MQ27 555 aa18.31■□□□□ 0.52
RAB28-205ENST00000508274 ITGBL1O95965 494 aaPredicted RBP18.31■□□□□ 0.52
RAB28-205ENST00000508274 MAP1SQ66K74 1059 aaPredicted RBP18.31■□□□□ 0.52
RAB28-205ENST00000508274 JMYQ8N9B5 988 aa18.31■□□□□ 0.52
RAB28-205ENST00000508274 GPR101Q96P66 508 aaPredicted RBP18.31■□□□□ 0.52
RAB28-205ENST00000508274 POLLQ9UGP5 575 aa18.31■□□□□ 0.52
RAB28-205ENST00000508274 RAD17O75943 681 aa18.3■□□□□ 0.52
RAB28-205ENST00000508274 NEXNQ0ZGT2 675 aa18.3■□□□□ 0.52
RAB28-205ENST00000508274 CCDC152Q4G0S7 254 aa18.3■□□□□ 0.52
RAB28-205ENST00000508274 HSP90B1P14625 803 aaKnown RBP18.3■□□□□ 0.52
RAB28-205ENST00000508274 FKBP5Q13451 457 aaPredicted RBP18.3■□□□□ 0.52
RAB28-205ENST00000508274 WASHC4Q2M389 1173 aa18.3■□□□□ 0.52
RAB28-205ENST00000508274 CREBZFQ9NS37 354 aa18.3■□□□□ 0.52
RAB28-205ENST00000508274 C6orf229H3BNL8 230 aa18.29■□□□□ 0.52
RAB28-205ENST00000508274 RIMBP2O15034 1052 aa18.29■□□□□ 0.52
RAB28-205ENST00000508274 CNTROBQ8N137 903 aa18.29■□□□□ 0.52
RAB28-205ENST00000508274 DBNDD1Q9H9R9 158 aa18.29■□□□□ 0.52
RAB28-205ENST00000508274 GPRC5DQ9NZD1 345 aa18.29■□□□□ 0.52
RAB28-205ENST00000508274 GMPSP49915 693 aaPredicted RBP18.28■□□□□ 0.52
RAB28-205ENST00000508274 CTSWP56202 376 aa18.28■□□□□ 0.52
RAB28-205ENST00000508274 CIAPIN1Q6FI81 312 aa18.28■□□□□ 0.52
RAB28-205ENST00000508274 TBC1D16Q8TBP0 767 aa18.28■□□□□ 0.52
RAB28-205ENST00000508274 SCN9AQ15858 1988 aa18.28■□□□□ 0.52
RAB28-205ENST00000508274 UBE3BQ7Z3V4 1068 aa18.27■□□□□ 0.52
RAB28-205ENST00000508274 MKRN1Q9UHC7 482 aaKnown RBP18.27■□□□□ 0.52
RAB28-205ENST00000508274 SHTN1A0MZ66 631 aa18.26■□□□□ 0.51
RAB28-205ENST00000508274 TTLL11Q8NHH1 800 aa18.26■□□□□ 0.51
RAB28-205ENST00000508274 DNAAF4Q8WXU2 420 aa18.26■□□□□ 0.51
RAB28-205ENST00000508274 ZNF521Q96K83 1311 aa18.26■□□□□ 0.51
RAB28-205ENST00000508274 H7C1W4 665 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms