RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 DICER1Q9UPY3 1922 aaKnown RBP20.78■□□□□ 0.92
DDR1-261ENST00000507901 RTL9Q8NET4 1388 aa20.78■□□□□ 0.92
DDR1-261ENST00000507901 SRCIN1Q9C0H9 1055 aa20.78■□□□□ 0.92
DDR1-261ENST00000507901 GPBP1L1Q9HC44 474 aaPredicted RBP20.78■□□□□ 0.92
DDR1-261ENST00000507901 LTBP1Q14766 1721 aa20.78■□□□□ 0.92
DDR1-261ENST00000507901 LTBP3Q9NS15 1303 aa20.78■□□□□ 0.92
DDR1-261ENST00000507901 HSP90B1P14625 803 aaKnown RBP20.77■□□□□ 0.92
DDR1-261ENST00000507901 C1QTNF8P60827 252 aa20.77■□□□□ 0.92
DDR1-261ENST00000507901 SLC4A10Q6U841 1118 aa20.77■□□□□ 0.92
DDR1-261ENST00000507901 OLFM4Q6UX06 510 aa20.77■□□□□ 0.92
DDR1-261ENST00000507901 GRM8O00222 908 aa20.76■□□□□ 0.91
DDR1-261ENST00000507901 CTSWP56202 376 aa20.76■□□□□ 0.91
DDR1-261ENST00000507901 GRAPQ13588 217 aa20.76■□□□□ 0.91
DDR1-261ENST00000507901 SOGA3Q5TF21 947 aa20.76■□□□□ 0.91
DDR1-261ENST00000507901 TTLL11Q8NHH1 800 aa20.76■□□□□ 0.91
DDR1-261ENST00000507901 GRAPLQ8TC17 118 aaPredicted RBP20.76■□□□□ 0.91
DDR1-261ENST00000507901 API5Q9BZZ5 524 aaKnown RBP20.76■□□□□ 0.91
DDR1-261ENST00000507901 PPEF1O14829 653 aaPredicted RBP20.75■□□□□ 0.91
DDR1-261ENST00000507901 CSF1RP07333 972 aa20.75■□□□□ 0.91
DDR1-261ENST00000507901 RASSF7Q02833 373 aa20.75■□□□□ 0.91
DDR1-261ENST00000507901 DDX46Q7L014 1031 aaKnown RBP20.75■□□□□ 0.91
DDR1-261ENST00000507901 BBOX1O75936 387 aa20.74■□□□□ 0.91
DDR1-261ENST00000507901 TRIM27P14373 513 aa20.74■□□□□ 0.91
DDR1-261ENST00000507901 FOXO4P98177 505 aa20.74■□□□□ 0.91
DDR1-261ENST00000507901 CCDC93Q567U6 631 aa20.74■□□□□ 0.91
DDR1-261ENST00000507901 CELF1Q92879 486 aaKnown RBP20.74■□□□□ 0.91
DDR1-261ENST00000507901 KAZALD1Q96I82 304 aa20.74■□□□□ 0.91
DDR1-261ENST00000507901 ZNF219Q9P2Y4 722 aaPredicted RBP20.74■□□□□ 0.91
DDR1-261ENST00000507901 ATP6V0A2Q9Y487 856 aa20.74■□□□□ 0.91
DDR1-261ENST00000507901 DUOX1Q9NRD9 1551 aa20.73■□□□□ 0.91
DDR1-261ENST00000507901 CCDC152Q4G0S7 254 aa20.73■□□□□ 0.91
DDR1-261ENST00000507901 CC2D2BQ6DHV5 1058 aa20.73■□□□□ 0.91
DDR1-261ENST00000507901 USP44Q9H0E7 712 aa20.73■□□□□ 0.91
DDR1-261ENST00000507901 SEC31BQ9NQW1 1179 aa20.73■□□□□ 0.91
DDR1-261ENST00000507901 TIAM2Q8IVF5 1701 aa20.73■□□□□ 0.91
DDR1-261ENST00000507901 NBPF7P0C2Y1 421 aaPredicted RBP20.72■□□□□ 0.91
DDR1-261ENST00000507901 EPHA10Q5JZY3 1008 aa20.72■□□□□ 0.91
DDR1-261ENST00000507901 C9orf131Q5VYM1 1079 aa20.72■□□□□ 0.91
DDR1-261ENST00000507901 INTS3Q68E01 1043 aaKnown RBP20.72■□□□□ 0.91
DDR1-261ENST00000507901 ATF7IPQ6VMQ6 1270 aa20.72■□□□□ 0.91
DDR1-261ENST00000507901 ZNF526Q8TF50 670 aaPredicted RBP20.72■□□□□ 0.91
DDR1-261ENST00000507901 TNNQ9UQP3 1299 aa20.72■□□□□ 0.91
DDR1-261ENST00000507901 SPEF2Q9C093 1822 aa20.71■□□□□ 0.91
DDR1-261ENST00000507901 CCT4P50991 539 aaKnown RBP20.71■□□□□ 0.91
DDR1-261ENST00000507901 TMC4Q7Z404 712 aa20.71■□□□□ 0.91
DDR1-261ENST00000507901 SP8Q8IXZ3 490 aa20.71■□□□□ 0.91
DDR1-261ENST00000507901 RTKN2Q8IZC4 609 aa20.71■□□□□ 0.91
DDR1-261ENST00000507901 PSMD1Q99460 953 aa20.71■□□□□ 0.91
DDR1-261ENST00000507901 GREM2Q9H772 168 aa20.71■□□□□ 0.91
DDR1-261ENST00000507901 FKBP4Q02790 459 aaKnown RBP eCLIP20.7■□□□□ 0.9
DDR1-261ENST00000507901 GRIPAP1Q4V328 841 aa20.7■□□□□ 0.9
DDR1-261ENST00000507901 SUCLG2Q96I99 432 aa20.7■□□□□ 0.9
DDR1-261ENST00000507901 TAOK3Q9H2K8 898 aa20.7■□□□□ 0.9
DDR1-261ENST00000507901 IPO8O15397 1037 aaKnown RBP20.69■□□□□ 0.9
DDR1-261ENST00000507901 LMNB1P20700 586 aa20.69■□□□□ 0.9
DDR1-261ENST00000507901 RPS8P62241 208 aaKnown RBP20.69■□□□□ 0.9
DDR1-261ENST00000507901 C9orf78Q9NZ63 289 aaPredicted RBP20.69■□□□□ 0.9
DDR1-261ENST00000507901 COL4A5P29400 1685 aa20.69■□□□□ 0.9
DDR1-261ENST00000507901 A0A1B0GUL6 1792 aa20.69■□□□□ 0.9
DDR1-261ENST00000507901 RABL6Q3YEC7 729 aaPredicted RBP20.68■□□□□ 0.9
DDR1-261ENST00000507901 CCDC85AQ96PX6 553 aaPredicted RBP20.68■□□□□ 0.9
DDR1-261ENST00000507901 RTFDC1Q9BY42 306 aaPredicted RBP20.68■□□□□ 0.9
DDR1-261ENST00000507901 RNF181Q9P0P0 153 aa20.68■□□□□ 0.9
DDR1-261ENST00000507901 FAM161AQ3B820 660 aa20.67■□□□□ 0.9
DDR1-261ENST00000507901 ZKSCAN2Q63HK3 967 aa20.67■□□□□ 0.9
DDR1-261ENST00000507901 ANKRD44Q8N8A2 993 aa20.66■□□□□ 0.9
DDR1-261ENST00000507901 FRAT1Q92837 279 aaPredicted RBP20.66■□□□□ 0.9
DDR1-261ENST00000507901 ZC3H4Q9UPT8 1303 aaKnown RBP20.66■□□□□ 0.9
DDR1-261ENST00000507901 ITGA6P23229 1130 aa20.65■□□□□ 0.9
DDR1-261ENST00000507901 RLBP1P12271 317 aa20.64■□□□□ 0.89
DDR1-261ENST00000507901 LMBR1LQ6UX01 489 aa20.64■□□□□ 0.89
DDR1-261ENST00000507901 CDC5LQ99459 802 aaKnown RBP20.64■□□□□ 0.89
DDR1-261ENST00000507901 BSDC1Q9NW68 430 aaPredicted RBP20.64■□□□□ 0.89
DDR1-261ENST00000507901 RCAN3Q9UKA8 241 aa20.64■□□□□ 0.89
DDR1-261ENST00000507901 KIF3CO14782 793 aa20.63■□□□□ 0.89
DDR1-261ENST00000507901 ANKRD18AQ8IVF6 992 aa20.63■□□□□ 0.89
DDR1-261ENST00000507901 BICC1Q9H694 974 aaKnown RBP20.63■□□□□ 0.89
DDR1-261ENST00000507901 ZNF277Q9NRM2 450 aaPredicted RBP20.63■□□□□ 0.89
DDR1-261ENST00000507901 PODXL2Q9NZ53 605 aa20.63■□□□□ 0.89
DDR1-261ENST00000507901 IARSP41252 1262 aaKnown RBP20.62■□□□□ 0.89
DDR1-261ENST00000507901 GPSM2P81274 684 aa20.62■□□□□ 0.89
DDR1-261ENST00000507901 MPNDQ8N594 471 aa20.62■□□□□ 0.89
DDR1-261ENST00000507901 TMEM57Q8N5G2 664 aa20.62■□□□□ 0.89
DDR1-261ENST00000507901 CLUAP1Q96AJ1 413 aa20.62■□□□□ 0.89
DDR1-261ENST00000507901 YTHDC1Q96MU7 727 aaKnown RBP20.62■□□□□ 0.89
DDR1-261ENST00000507901 MEIS3Q99687 375 aa20.62■□□□□ 0.89
DDR1-261ENST00000507901 KDM2BQ8NHM5 1336 aa20.61■□□□□ 0.89
DDR1-261ENST00000507901 VPS33BQ9H267 617 aa20.61■□□□□ 0.89
DDR1-261ENST00000507901 DPP8Q6V1X1 898 aaPredicted RBP20.6■□□□□ 0.89
DDR1-261ENST00000507901 DZIP1LQ8IYY4 767 aaKnown RBP20.6■□□□□ 0.89
DDR1-261ENST00000507901 POLLQ9UGP5 575 aa20.6■□□□□ 0.89
DDR1-261ENST00000507901 MINPP1Q9UNW1 487 aa20.6■□□□□ 0.89
DDR1-261ENST00000507901 ANKRD18BA2A2Z9 1011 aa20.59■□□□□ 0.89
DDR1-261ENST00000507901 IFIT5Q13325 482 aaKnown RBP20.59■□□□□ 0.89
DDR1-261ENST00000507901 FZD9O00144 591 aa20.58■□□□□ 0.89
DDR1-261ENST00000507901 UBTFL1P0CB47 393 aaPredicted RBP20.58■□□□□ 0.89
DDR1-261ENST00000507901 RFX5P48382 616 aaPredicted RBP20.58■□□□□ 0.89
DDR1-261ENST00000507901 NMRK2Q9NPI5 230 aa20.58■□□□□ 0.89
DDR1-261ENST00000507901 TOMM70O94826 608 aa20.57■□□□□ 0.88
DDR1-261ENST00000507901 IGHMBP2P38935 993 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms