RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 USP20Q9Y2K6 914 aa10.04□□□□□ -0.8
LINC01088-203ENST00000507476 SASH3O75995 380 aa10.03□□□□□ -0.8
LINC01088-203ENST00000507476 CPB1P15086 417 aa10.03□□□□□ -0.8
LINC01088-203ENST00000507476 PLAURQ03405 335 aa10.03□□□□□ -0.8
LINC01088-203ENST00000507476 DHX32Q7L7V1 743 aaKnown RBP10.03□□□□□ -0.8
LINC01088-203ENST00000507476 DMRTC2Q8IXT2 367 aaPredicted RBP10.03□□□□□ -0.8
LINC01088-203ENST00000507476 TRPM4Q8TD43 1214 aa10.03□□□□□ -0.8
LINC01088-203ENST00000507476 PRIMPOLQ96LW4 560 aa10.03□□□□□ -0.8
LINC01088-203ENST00000507476 LPIN3Q9BQK8 851 aa10.03□□□□□ -0.8
LINC01088-203ENST00000507476 C11orf16Q9NQ32 467 aa10.03□□□□□ -0.8
LINC01088-203ENST00000507476 ADGRE1Q14246 886 aa10.02□□□□□ -0.81
LINC01088-203ENST00000507476 MBTPS1Q14703 1052 aa10.02□□□□□ -0.81
LINC01088-203ENST00000507476 GRIK5Q16478 980 aa10.02□□□□□ -0.81
LINC01088-203ENST00000507476 COX20Q5RI15 118 aa10.02□□□□□ -0.81
LINC01088-203ENST00000507476 SHISA2Q6UWI4 295 aa10.02□□□□□ -0.81
LINC01088-203ENST00000507476 C9orf172C9J069 976 aa10.01□□□□□ -0.81
LINC01088-203ENST00000507476 RARAP10276 462 aa10.01□□□□□ -0.81
LINC01088-203ENST00000507476 RAC1P63000 192 aa10.01□□□□□ -0.81
LINC01088-203ENST00000507476 MLLT1Q03111 559 aaPredicted RBP10.01□□□□□ -0.81
LINC01088-203ENST00000507476 FAM69CQ0P6D2 419 aa10.01□□□□□ -0.81
LINC01088-203ENST00000507476 OCLNQ16625 522 aa10.01□□□□□ -0.81
LINC01088-203ENST00000507476 PERM1Q5SV97 790 aa10.01□□□□□ -0.81
LINC01088-203ENST00000507476 FMR1NBQ8N0W7 255 aaPredicted RBP10.01□□□□□ -0.81
LINC01088-203ENST00000507476 FRRS1LQ9P0K9 344 aa10.01□□□□□ -0.81
LINC01088-203ENST00000507476 RTCBQ9Y3I0 505 aaKnown RBP10.01□□□□□ -0.81
LINC01088-203ENST00000507476 ACIN1Q9UKV3 1341 aaKnown RBP10.01□□□□□ -0.81
LINC01088-203ENST00000507476 DYRK3O43781 588 aa10□□□□□ -0.81
LINC01088-203ENST00000507476 SRPK2P78362 688 aaKnown RBP10□□□□□ -0.81
LINC01088-203ENST00000507476 GPLD1P80108 840 aa10□□□□□ -0.81
LINC01088-203ENST00000507476 PCSK7Q16549 785 aa10□□□□□ -0.81
LINC01088-203ENST00000507476 SWI5Q1ZZU3 235 aa10□□□□□ -0.81
LINC01088-203ENST00000507476 TREML1Q86YW5 311 aa10□□□□□ -0.81
LINC01088-203ENST00000507476 LENG1Q96BZ8 264 aaPredicted RBP10□□□□□ -0.81
LINC01088-203ENST00000507476 PRMT3O60678 531 aa9.99□□□□□ -0.81
LINC01088-203ENST00000507476 EGFRP00533 1210 aa9.99□□□□□ -0.81
LINC01088-203ENST00000507476 ELOAQ14241 798 aaKnown RBP9.99□□□□□ -0.81
LINC01088-203ENST00000507476 MSL1Q68DK7 614 aa9.99□□□□□ -0.81
LINC01088-203ENST00000507476 STK32AQ8WU08 396 aa9.99□□□□□ -0.81
LINC01088-203ENST00000507476 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.99□□□□□ -0.815e-7■■■■■ 26.9
LINC01088-203ENST00000507476 RGL4Q8IZJ4 473 aa9.98□□□□□ -0.81
LINC01088-203ENST00000507476 SAP130Q9H0E3 1048 aa9.98□□□□□ -0.81
LINC01088-203ENST00000507476 KCNMB2Q9Y691 235 aa9.98□□□□□ -0.81
LINC01088-203ENST00000507476 XYLBO75191 536 aa9.97□□□□□ -0.81
LINC01088-203ENST00000507476 FOXD4L6Q3SYB3 417 aaPredicted RBP9.97□□□□□ -0.81
LINC01088-203ENST00000507476 ELMSAN1Q6PJG2 1045 aa9.97□□□□□ -0.81
LINC01088-203ENST00000507476 FOXD4L3Q6VB84 417 aaPredicted RBP9.97□□□□□ -0.81
LINC01088-203ENST00000507476 HFE2Q6ZVN8 426 aa9.97□□□□□ -0.81
LINC01088-203ENST00000507476 TXNRD3Q86VQ6 643 aa9.97□□□□□ -0.81
LINC01088-203ENST00000507476 ETFBKMTQ8IXQ9 262 aa9.97□□□□□ -0.81
LINC01088-203ENST00000507476 TLR7Q9NYK1 1049 aaKnown RBP9.97□□□□□ -0.81
LINC01088-203ENST00000507476 NRLP54845 237 aa9.96□□□□□ -0.82
LINC01088-203ENST00000507476 NRG1Q02297 640 aaPredicted RBP9.96□□□□□ -0.82
LINC01088-203ENST00000507476 FAM26DQ5JW98 314 aa9.96□□□□□ -0.82
LINC01088-203ENST00000507476 ZMYM1Q5SVZ6 1142 aa9.96□□□□□ -0.82
LINC01088-203ENST00000507476 CMTR1Q8N1G2 835 aaKnown RBP9.96□□□□□ -0.82
LINC01088-203ENST00000507476 TTC9Q92623 222 aa9.96□□□□□ -0.82
LINC01088-203ENST00000507476 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.95□□□□□ -0.82
LINC01088-203ENST00000507476 SMG9Q9H0W8 520 aaKnown RBP9.95□□□□□ -0.82
LINC01088-203ENST00000507476 CAPN12Q6ZSI9 719 aa9.94□□□□□ -0.82
LINC01088-203ENST00000507476 FBXO11Q86XK2 927 aa9.94□□□□□ -0.82
LINC01088-203ENST00000507476 DTWD1Q8N5C7 304 aa9.94□□□□□ -0.82
LINC01088-203ENST00000507476 MMP20O60882 483 aa9.93□□□□□ -0.82
LINC01088-203ENST00000507476 C16orf46Q6P387 395 aa9.93□□□□□ -0.82
LINC01088-203ENST00000507476 WFDC8Q8IUA0 241 aa9.93□□□□□ -0.82
LINC01088-203ENST00000507476 SSBP4Q9BWG4 385 aaPredicted RBP9.93□□□□□ -0.82
LINC01088-203ENST00000507476 USP21Q9UK80 565 aa9.93□□□□□ -0.82
LINC01088-203ENST00000507476 J3QW42 95 aa9.92□□□□□ -0.82
LINC01088-203ENST00000507476 TNFRSF10BO14763 440 aa9.92□□□□□ -0.82
LINC01088-203ENST00000507476 H2AFB1P0C5Y9 115 aa9.92□□□□□ -0.82
LINC01088-203ENST00000507476 H2AFB2P0C5Z0 115 aa9.92□□□□□ -0.82
LINC01088-203ENST00000507476 EIF2AK2P19525 551 aaKnown RBP9.92□□□□□ -0.82
LINC01088-203ENST00000507476 PRSS36Q5K4E3 855 aa9.92□□□□□ -0.82
LINC01088-203ENST00000507476 COL26A1Q96A83 441 aa9.92□□□□□ -0.82
LINC01088-203ENST00000507476 CXXC1Q9P0U4 656 aaPredicted RBP9.92□□□□□ -0.82
LINC01088-203ENST00000507476 DEAF1O75398 565 aaPredicted RBP9.91□□□□□ -0.82
LINC01088-203ENST00000507476 ATG7O95352 703 aa9.91□□□□□ -0.82
LINC01088-203ENST00000507476 ARID4AP29374 1257 aaPredicted RBP9.91□□□□□ -0.82
LINC01088-203ENST00000507476 TRIP4Q15650 581 aaPredicted RBP9.91□□□□□ -0.82
LINC01088-203ENST00000507476 MKNK1Q9BUB5 465 aa9.91□□□□□ -0.82
LINC01088-203ENST00000507476 LOC102724428A0A0B4J2F2 783 aa9.9□□□□□ -0.82
LINC01088-203ENST00000507476 PSAPP07602 524 aa9.9□□□□□ -0.82
LINC01088-203ENST00000507476 HOXD8P13378 290 aaPredicted RBP9.9□□□□□ -0.82
LINC01088-203ENST00000507476 BRD2P25440 801 aaKnown RBP9.9□□□□□ -0.82
LINC01088-203ENST00000507476 SIK1P57059 783 aa9.9□□□□□ -0.82
LINC01088-203ENST00000507476 TMEM164Q5U3C3 297 aa9.9□□□□□ -0.82
LINC01088-203ENST00000507476 PLD4Q96BZ4 506 aa9.9□□□□□ -0.82
LINC01088-203ENST00000507476 NSUN5Q96P11 429 aaKnown RBP9.9□□□□□ -0.82
LINC01088-203ENST00000507476 NAA30Q147X3 362 aaPredicted RBP9.89□□□□□ -0.83
LINC01088-203ENST00000507476 SOX18P35713 384 aa9.88□□□□□ -0.83
LINC01088-203ENST00000507476 WFDC12Q8WWY7 111 aa9.88□□□□□ -0.83
LINC01088-203ENST00000507476 TP53INP1Q96A56 240 aa9.88□□□□□ -0.83
LINC01088-203ENST00000507476 SLAIN2Q9P270 581 aa9.88□□□□□ -0.83
LINC01088-203ENST00000507476 NOS3P29474 1203 aa9.87□□□□□ -0.83
LINC01088-203ENST00000507476 NLRP13Q86W25 1043 aa9.87□□□□□ -0.83
LINC01088-203ENST00000507476 DLL1O00548 723 aa9.86□□□□□ -0.83
LINC01088-203ENST00000507476 IREB2P48200 963 aaKnown RBP9.86□□□□□ -0.83
LINC01088-203ENST00000507476 IGF2-ASQ6U949 168 aa9.86□□□□□ -0.83
LINC01088-203ENST00000507476 PTCD1O75127 700 aaKnown RBP9.85□□□□□ -0.83
LINC01088-203ENST00000507476 GDF6Q6KF10 455 aaPredicted RBP9.85□□□□□ -0.83
LINC01088-203ENST00000507476 CLP1Q92989 425 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms